Gene

KWMTBOMO02062

Pre Gene Modal

BGIBMGA011169

Annotation

PREDICTED:_succinate_dehydrogenase_assembly_factor_4?_mitochondrial-like_[Plutella_xylostella]

Location

Bomo_Chr4(-):11229776-11230386      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.378

CDS

ATGTTGTGGAACGCTATTAGAAAGTTAAGAAATAAGGCCTTAAAATTGAATAATGCAAGGATATGTTTAAGTCATTATTACTCACAACAGCCACCGATCGAAAAAGAAAATGAAAGTGTAAAAAAACCTGAGTCAAAACGATTATCTGAGTTTAGAAAAAAATTGAGAGAAACTACATCAATCACTGATCTTGGTGAACAAACTTCAAATTCCAAGGAAGATGCTTTGCCTCCTTGGCCCAACAATACTAACCCCAACACTGGTGAAGTTGGTGGTCCCAAAGGGCCTGAACCAACCAGATATGGTGATTGGGAAAGAAAAGGAAGAGTATCTGATTTCTAA

Protein

MLWNAIRKLRNKALKLNNARICLSHYYSQQPPIEKENESVKKPESKRLSEFRKKLRETTSITDLGEQTSNSKEDALPPWPNNTNPNTGEVGGPKGPEPTRYGDWERKGRVSDF

Uniprot

H9JNR5   A0A2A4K7R8   A0A2H1WP76   A0A1E1WIT3   A0A194PK89   A0A194QSH7   + More
S4P3P4   A0A0L7LQF0   A0A1L8E047   A0A1L8DZY2   A0A1Q3FIM8   Q16JP7   A0A146LGA5   B0WCR5   T1DGZ2   A0A023EEU2   W5J8J7   A0A1Y1KPU2   A0A2M4C412   A0A2M4C405   A0A2M3ZII6   A0A2M3Z8J9   A0A182F5J6   A0A2M3ZI68   A0A2M4AX13   A0A1A9W865   A0A1B0FKM1   A0A1A9UNM3   A0A1B0BP38   A0A1A9XWS1   A0A1A9ZHP3   A0A1J1ITT7   W8CDG3   A0A0L0BZA5   A0A1I8N0S1   A0A1B0A0P6   A0A1A9XKX7   A0A1A9UIM3   A0A1B0BCC1   B4GK12   D3TMZ4   E2BFH7   Q29P46   A0A1A9WHK4   A0A067QMB5   B4JAP6   A0A0R3NR55   K7J0G1  

Pubmed

19121390    26354079    23622113    26227816    17510324    26823975    + More
24945155    26483478    20920257    23761445    28004739    24495485    26108605    25315136    17994087    20353571    20798317    15632085    24845553    20075255   

EMBL

BABH01042252    NWSH01000081    PCG79813.1    ODYU01009654    SOQ54234.1    GDQN01004150    + More
JAT86904.1    KQ459601    KPI93737.1    KQ461196    KPJ06496.1    GAIX01011520    JAA81040.1    JTDY01000385    KOB77436.1    GFDF01002030    JAV12054.1    GFDF01002031    JAV12053.1    GFDL01007584    JAV27461.1    CH477997    EAT34515.1    GDHC01011415    JAQ07214.1    DS231890    EDS43791.1    GAMD01002581    JAA99009.1    JXUM01041298    GAPW01006233    GAPW01006232    KQ561278    JAC07366.1    KXJ79119.1    ADMH02001866    ETN60782.1    GEZM01081985    JAV61456.1    GGFJ01010902    MBW60043.1    GGFJ01010901    MBW60042.1    GGFM01007509    MBW28260.1    GGFM01004093    MBW24844.1    GGFM01007460    MBW28211.1    GGFK01012012    MBW45333.1    CCAG010008393    JXJN01017801    JXJN01025599    CVRI01000059    CRL03607.1    GAMC01001996    JAC04560.1    JRES01001119    KNC25392.1    JXJN01011918    CH479184    EDW36978.1    EZ422796    ADD19072.1    GL448037    EFN85499.1    CH379058    EAL34447.3    KK853171    KDR10309.1    CH916368    EDW03854.1    KRT03531.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000008820    + More
UP000002320    UP000069940    UP000249989    UP000000673    UP000069272    UP000091820    UP000092444    UP000078200    UP000092460    UP000092443    UP000092445    UP000183832    UP000037069    UP000095301    UP000008744    UP000008237    UP000001819    UP000027135    UP000001070    UP000002358   

PRIDE

H9JNR5   

Pfam

PF07896   DUF1674

Interpro

IPR012875   SDHF4       

ProteinModelPortal

H9JNR5   A0A2A4K7R8   A0A2H1WP76   A0A1E1WIT3   A0A194PK89   A0A194QSH7   + More
S4P3P4   A0A0L7LQF0   A0A1L8E047   A0A1L8DZY2   A0A1Q3FIM8   Q16JP7   A0A146LGA5   B0WCR5   T1DGZ2   A0A023EEU2   W5J8J7   A0A1Y1KPU2   A0A2M4C412   A0A2M4C405   A0A2M3ZII6   A0A2M3Z8J9   A0A182F5J6   A0A2M3ZI68   A0A2M4AX13   A0A1A9W865   A0A1B0FKM1   A0A1A9UNM3   A0A1B0BP38   A0A1A9XWS1   A0A1A9ZHP3   A0A1J1ITT7   W8CDG3   A0A0L0BZA5   A0A1I8N0S1   A0A1B0A0P6   A0A1A9XKX7   A0A1A9UIM3   A0A1B0BCC1   B4GK12   D3TMZ4   E2BFH7   Q29P46   A0A1A9WHK4   A0A067QMB5   B4JAP6   A0A0R3NR55   K7J0G1  

PDB

2K5K     E-value=0.00497595,     Score=87

KEGG

101744730    no KO assigned | (RefSeq) succinate dehydrogenase assembly factor 4, mitochondrial-like

GO

GO:0034614   GO:0003407   GO:0008177   GO:0045333   GO:0005749   GO:0034553  

Length:

113

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.39893

outside

1  -  113

 

 

Pi

225.220442

Theta

176.049705

Tajima's D

0.907144

CLR

0

CSRT

0.634418279086046

Interpretation

Uncertain