Gene

KWMTBOMO02060  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002972

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_importin_subunit_beta-1_[Bombyx_mori]

Location

Bomo_Chr4(+):11202477-11210099      View in EpiBrowser

Location in the cell

Golgi   Reliability : 2.742

CDS

ATGCACGCAGAAACAACATTAACGCTTATACAAATACTTGAGAAGACAGTTTCACCTGATCGAAATGAATTGGAAGCAGCAGTTAGATACCTCGACCATGCTGCCACCACAAATTTCACAACATTCATCAAAATGTTGTCCGATGTCCTTCTCCAAGGTGGTAACAGTCAAGTGGCTAGGATGGCAGCTGGTTTGCAATTGAAAAATCATCTCACTTCTAAAGATCCTACACTTAAACAACAATATCAACAAAGATGGCTGGCTTTGGCAGAAGATGTTCGACTTTATATAAAAGAAAATATATTAGCTGCTATAGGAACAGAGAATAGTCGTCCAAGTTCAGCAGCACAGTGTGTGGCGTATGTGGCAGTAGCTGAGCTCCCAGTAGGACAATGGAATGATCTAATACCAATTCTTGTAGAAAATGTTGTTCATGTCCAATCTACTGAACTCAAAAAGGAAGCGACTTTGGAGGCTATTGGCTACATTTGTCAGGATATTGATGCTGAAGTATTAACAGAAAGAAGTAATCAAATTCTTACGGCCATCATACATGGCATGAGGTCAACTGAACCCAGTAATCATGTTCGACTAGCTGCTACTCAAGCTTTGCTCAACTCTCTAGAATTCACCAGAGCGAACTTTGAAAAAGAAAATGAAAGAAACTTTATTATGGAGGTTGTCTGTGAAGCCACACAGTCTAGTGACATGAGAATCAGCGTTGCTGCTTTGCAATGCTTAGTGAAAATTTTATCACTTTATTATCAACATATGGAACCTTACATGGGACAAGCTCTATTCCCCATAACACTTGAGGCTATGAAATCTGATATTGATGAGATTTCATTACAAGGTATTGAATTCTGGTCCAATGTGAGCGATGAGGAAATAGATCTCGCAATTGAAGAAGCTGAAGCAGTTGAAGCAGGTCGACCTCCAACTAGAACTTCACGATTCTATGCAAGAGGGGCACTTCAATACCTTGCACCTGTCTTGATGCAAAAACTAACAAAACAAGATGATTCTGATGATGAATTGGAATGGAATCCGTCAAAGGCTGCTTCTGTTTGTCTTATGCTTTTGTCAAATTGCTGTGAAGACGAAATTGTACCGCATGTGTTACCGTTTATTAATTGTAACATTAAAAGTGAAAATTGGCGATACAGAGAAGCTGCTCTAATGGCATTTGGTTCAATTCTTGGTGGTCTTGGAGCTAACACTCTGAAACCATTAGTGGAAAATGCCATGCCAACTTTGATTGAAGCGATGTATGATTCTAGTATAGCTGTAAGGGACACCGCTGCTTGGACATTTGGTAGAATTTGTGAAATTGTCCCTGAAGCTGCTATCAATGAAACATATTTGAAACCATTATTAGAGAGTCTTGTAAATGGTTTAAAAGCTGAACCTAGAGTTGCAGCTAATGTTTGTTGGGCATTCACCGGTTTGGCAGAAGCAGCATACGAGGCAGCGGATGGGGGTGATTCTAATCAGCCAAAGACATATTGCATGTCAAATTATTTTGATTTCATCGTTCAGAGATTACTTGAAACAACGGATCGTCAAGATGCTGCTCAACATAATTTGAGATCAGCTGCATATGAAGCTCTAATGGAAATGGTCAAAAATTCGCCCAGTGACTGTTATGTCACAGTCCAAAAGACCACTATGGTTATACTTGAGAGACTCCAACAAGTTCTACAAATGGAAATACATGTTTCTAGTCAAGCTGACCGTTCTCAATTTAACGACCTCCAAAGTTTATTATGTGCTACCTTGCATTCGGTTCTAAAAAAAGTTACTCCTGATGATGCTCCTCAAATATCAGACACAATAATGACTGCTTTGTTAACTGTATTTGCAAGTAATGCTGGAAAAGCAGGCAGTGTTCAGGAGGATGCTCTGATGGCTGTTTCTACTCTTGTTGAAGTCTTAGGAGAAGAGTTTTTAAAATACATGGATACATTCAAAAAATACCTTTATACTGGTCTTAAAAACCACCAGGAGTACCAAGTTTGCATTGCAGCTGTAGGATTGACTGGTGATATCTGTCGCGCCTTGAAAAATAAGATGGCACCCTATTGTGATGAGATAATAGTTTTGTTATTGGAGAATTTAGGTGATCCATCAATTCACCGATCAGTGAAGCCTGAAATATTATCTGTATTTGGAGACATTGCTTTGAGTATTGGTAGCGATTTTGGAAAATATTTTGATGTCGTCATGCAAATGCTATTGCAGGCTAGTAATGCTCAAGTGGACCATAACGACTATGATATGGTTGAATATTTGGGTGAACTCCGCGAAAGCGTTCTGGAAGCATACACTGGAATCATTCAAGGCCTTAAAGGTGTAGGTTCTCAGGTACGACCGGACATCGCTATCGTCGAGCCGCACGTGCCGGCGATCGTTAACTTCATGATTCAGGTTGCGAACGAAGAGGACCGCACCGACGCCCAGATGGCGGTCATATCGGGGCTCATGGGCGACTTGACTAACGCGTTCGGGGCGCACGTGCTGCCCATGCTCGACACCAAGCCGCTCACCGACATGCTGCAGAGATGCGTCGCGTCAAGCAGACCCTCCCTCTTGCCAGCTGATTTGGAATTACCGACCACAGCATTGAAACGCAGCTTGAAACAACATACTGCTGGTAAAATCAATTTTTGA

Protein

MHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAVAELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNHVRLAATQALLNSLEFTRANFEKENERNFIMEVVCEATQSSDMRISVAALQCLVKILSLYYQHMEPYMGQALFPITLEAMKSDIDEISLQGIEFWSNVSDEEIDLAIEEAEAVEAGRPPTRTSRFYARGALQYLAPVLMQKLTKQDDSDDELEWNPSKAASVCLMLLSNCCEDEIVPHVLPFINCNIKSENWRYREAALMAFGSILGGLGANTLKPLVENAMPTLIEAMYDSSIAVRDTAAWTFGRICEIVPEAAINETYLKPLLESLVNGLKAEPRVAANVCWAFTGLAEAAYEAADGGDSNQPKTYCMSNYFDFIVQRLLETTDRQDAAQHNLRSAAYEALMEMVKNSPSDCYVTVQKTTMVILERLQQVLQMEIHVSSQADRSQFNDLQSLLCATLHSVLKKVTPDDAPQISDTIMTALLTVFASNAGKAGSVQEDALMAVSTLVEVLGEEFLKYMDTFKKYLYTGLKNHQEYQVCIAAVGLTGDICRALKNKMAPYCDEIIVLLLENLGDPSIHRSVKPEILSVFGDIALSIGSDFGKYFDVVMQMLLQASNAQVDHNDYDMVEYLGELRESVLEAYTGIIQGLKGVGSQVRPDIAIVEPHVPAIVNFMIQVANEEDRTDAQMAVISGLMGDLTNAFGAHVLPMLDTKPLTDMLQRCVASSRPSLLPADLELPTTALKRSLKQHTAGKINF

Uniprot

H9J0D6   A0A2A4K819   A0A2H1VCV7   A0A194QLU9   A0A1E1WEE3   S4PBE6   + More
A0A212FFM1   A0A2J7RFX1   A0A2J7RFW8   A0A1B6I258   A0A1B6I865   A0A1Y1KG22   D6WNI5   A0A1W4XAG9   E9IJT9   A0A0J7KMD2   E2BR28   A0A1B6BYM1   F4X0K9   K7J9Z2   A0A158ND11   Q0IE87   Q0IE88   A0A1Q3EYW7   A0A1Q3EYE3   B0WBR4   A0A1S4JBY5   A0A3L8DKZ0   A0A0C9RWX3   U5EL75   A0A336LK41   U4UTN2   N6U3L0   A0A087ZMX9   A0A2A3E9L6   A0A195B8V4   A0A151WYU3   A0A0A9WWE9   A0A0M8ZQU5   A0A195D0J7   A0A0K8TFT6   A0A0A9X169   A0A0K8TH25   A0A195D8P1   A0A154P5L2   A0A026WJI9   E2A048   A0A195F7M8   A0A1B0GIQ2   A0A1S4H2E8   A0A3F2YYB8   A0A182KYW9   A0A182XLT9   A0A182VBX3   A0A182TV19   Q7Q186   A0A182HRG5   A0A1L8DXL0   A0A182K1F4   A0A182RR93   A0A182YMR1   A0A069DXP2   A0A182Q9C0   A0A182NAT8   A0A182MDF9   A0A182IPL8   A0A182W8Z5   A0A2M4BDG4   B4JAJ7   A0A0A1XB77   W8C7E3   A0A2M3Z154   T1IDG3   A0A0V0G8U5   A0A023F414   A0A2M4A3T7   W5JHY1   A0A1I8N3Z5   A0A084W8P7   A0A1I8P7H3   A0A182F1N9   A0A224X6X6   A0A034UZ33   A0A182PG28   T1J2G6   A0A0L0C9D4   A0A1S3IUZ5   A0A0M3QUB0   E0VS40   B4MWC0   B4LV89   B4KJ03   B3MK19   A0A1B0D267   V5HPD2   A0A131XZE1   A0A3B0JVU8   A0A1W4UVJ2   E9GU06   A0A1A9XKX3  

Pubmed

19121390    26354079    23622113    22118469    28004739    18362917    + More
19820115    21282665    20798317    21719571    20075255    21347285    17510324    30249741    23537049    25401762    26823975    24508170    12364791    20966253    25244985    26334808    17994087    25830018    24495485    25474469    20920257    23761445    25315136    24438588    25348373    26108605    20566863    18057021    25765539    21292972   

EMBL

BABH01010537    NWSH01000081    PCG79802.1    ODYU01001874    SOQ38688.1    KQ461196    + More
KPJ06502.1    GDQN01005729    JAT85325.1    GAIX01004656    JAA87904.1    AGBW02008803    OWR52529.1    NEVH01004408    PNF39734.1    PNF39735.1    GECU01026712    JAS80994.1    GECU01024609    JAS83097.1    GEZM01084868    GEZM01084867    JAV60452.1    KQ971343    EFA04374.2    GL763883    EFZ19149.1    LBMM01005580    KMQ91404.1    GL449898    EFN81834.1    GEDC01030931    GEDC01018372    JAS06367.1    JAS18926.1    GL888498    EGI60001.1    AAZX01002269    AAZX01002270    AAZX01002272    AAZX01004221    AAZX01006609    AAZX01009899    AAZX01011937    AAZX01012571    AAZX01013111    AAZX01015396    ADTU01012159    CH478001    EAT34489.1    EAT34490.1    GFDL01014555    JAV20490.1    GFDL01014726    JAV20319.1    DS231881    EDS42685.1    QOIP01000007    RLU20579.1    GBYB01013570    JAG83337.1    GANO01001534    JAB58337.1    UFQT01000026    SSX18055.1    KB632357    ERL93500.1    APGK01043832    KB741018    ENN75206.1    KZ288335    PBC27866.1    KQ976558    KYM80670.1    KQ982650    KYQ52865.1    GBHO01032757    GBHO01032756    GDHC01011785    JAG10847.1    JAG10848.1    JAQ06844.1    KQ435896    KOX69255.1    KQ977012    KYN06397.1    GBRD01001368    JAG64453.1    GBHO01032754    JAG10850.1    GBRD01001366    JAG64455.1    KQ981135    KYN09243.1    KQ434822    KZC07143.1    KK107213    EZA55289.1    GL435551    EFN73181.1    KQ981744    KYN36386.1    AJWK01015250    AJWK01015251    AJWK01015252    AJWK01015253    AAAB01008980    EAA14059.3    APCN01001701    GFDF01002952    JAV11132.1    GBGD01000417    JAC88472.1    AXCN02000659    AXCM01000135    GGFJ01001860    MBW51001.1    CH916368    EDW02783.1    GBXI01006036    JAD08256.1    GAMC01003645    GAMC01003644    JAC02912.1    GGFM01001499    MBW22250.1    ACPB03012769    GECL01001839    JAP04285.1    GBBI01002998    JAC15714.1    GGFK01002094    MBW35415.1    ADMH02001134    ETN63982.1    ATLV01021497    KE525319    KFB46591.1    GFTR01008219    JAW08207.1    GAKP01023414    JAC35544.1    JH431806    JRES01000714    KNC29033.1    CP012523    ALC40319.1    DS235742    EEB16196.1    CH963857    EDW75990.1    CH940649    EDW64349.1    KRF81570.1    KRF81571.1    CH933807    EDW13516.1    KRG03798.1    KRG03799.1    CH902620    EDV31437.1    KPU73381.1    KPU73382.1    AJVK01010495    AJVK01010496    GANP01006931    JAB77537.1    GEFM01003182    JAP72614.1    OUUW01000004    SPP79620.1    GL732565    EFX76950.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000235965    UP000007266    + More
UP000192223    UP000036403    UP000008237    UP000007755    UP000002358    UP000005205    UP000008820    UP000002320    UP000279307    UP000030742    UP000019118    UP000005203    UP000242457    UP000078540    UP000075809    UP000053105    UP000078542    UP000078492    UP000076502    UP000053097    UP000000311    UP000078541    UP000092461    UP000075882    UP000076407    UP000075903    UP000075902    UP000007062    UP000075840    UP000075881    UP000075900    UP000076408    UP000075886    UP000075884    UP000075883    UP000075880    UP000075920    UP000001070    UP000015103    UP000000673    UP000095301    UP000030765    UP000095300    UP000069272    UP000075885    UP000037069    UP000085678    UP000092553    UP000009046    UP000007798    UP000008792    UP000009192    UP000007801    UP000092462    UP000268350    UP000192221    UP000000305    UP000092443   

PRIDE

H9J0D6    V5HPD2   

Pfam

PF03810   IBN_N        + More
PF02985   HEAT
PF16661   Lactamase_B_6
PF07521   RMMBL
PF10996   Beta-Casp

Interpro

IPR016024   ARM-type_fold        + More
IPR021133   HEAT_type_2       
IPR001494   Importin-beta_N       
IPR011989   ARM-like       
IPR040122   Importin_beta       
IPR000225   Armadillo       
IPR000357   HEAT       
IPR001279   Metallo-B-lactamas       
IPR041897   INTS11-like_MBL-fold       
IPR022712   Beta_Casp       
IPR036866   RibonucZ/Hydroxyglut_hydro       
IPR011108   RMMBL       

SUPFAM

SSF48371   SSF48371        + More
SSF56281   SSF56281       

Gene 3D

1.25.10.10     3.60.15.10    

CDD

cd16291  INTS11-like_MBL-fold

ProteinModelPortal

H9J0D6   A0A2A4K819   A0A2H1VCV7   A0A194QLU9   A0A1E1WEE3   S4PBE6   + More
A0A212FFM1   A0A2J7RFX1   A0A2J7RFW8   A0A1B6I258   A0A1B6I865   A0A1Y1KG22   D6WNI5   A0A1W4XAG9   E9IJT9   A0A0J7KMD2   E2BR28   A0A1B6BYM1   F4X0K9   K7J9Z2   A0A158ND11   Q0IE87   Q0IE88   A0A1Q3EYW7   A0A1Q3EYE3   B0WBR4   A0A1S4JBY5   A0A3L8DKZ0   A0A0C9RWX3   U5EL75   A0A336LK41   U4UTN2   N6U3L0   A0A087ZMX9   A0A2A3E9L6   A0A195B8V4   A0A151WYU3   A0A0A9WWE9   A0A0M8ZQU5   A0A195D0J7   A0A0K8TFT6   A0A0A9X169   A0A0K8TH25   A0A195D8P1   A0A154P5L2   A0A026WJI9   E2A048   A0A195F7M8   A0A1B0GIQ2   A0A1S4H2E8   A0A3F2YYB8   A0A182KYW9   A0A182XLT9   A0A182VBX3   A0A182TV19   Q7Q186   A0A182HRG5   A0A1L8DXL0   A0A182K1F4   A0A182RR93   A0A182YMR1   A0A069DXP2   A0A182Q9C0   A0A182NAT8   A0A182MDF9   A0A182IPL8   A0A182W8Z5   A0A2M4BDG4   B4JAJ7   A0A0A1XB77   W8C7E3   A0A2M3Z154   T1IDG3   A0A0V0G8U5   A0A023F414   A0A2M4A3T7   W5JHY1   A0A1I8N3Z5   A0A084W8P7   A0A1I8P7H3   A0A182F1N9   A0A224X6X6   A0A034UZ33   A0A182PG28   T1J2G6   A0A0L0C9D4   A0A1S3IUZ5   A0A0M3QUB0   E0VS40   B4MWC0   B4LV89   B4KJ03   B3MK19   A0A1B0D267   V5HPD2   A0A131XZE1   A0A3B0JVU8   A0A1W4UVJ2   E9GU06   A0A1A9XKX3  

PDB

1UKL     E-value=0,     Score=2761

KEGG

101742901    K14293 importin subunit beta-1 | (RefSeq) importin subunit beta-1

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0008536   GO:0006606   GO:0005623   GO:0005634   GO:0006610   GO:0008139   GO:0034399   GO:0031965   GO:0006607   GO:0005737   GO:0005635   GO:0043186   GO:0005488   GO:0006886   GO:0005840   GO:0006412   GO:0003676   GO:0005739   GO:0006635   GO:0016507   GO:0048384  

PANTHER

PTHR10527  

Subcellular location

Nucleus  

Length:

889

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04258

Exp number, first 60 AAs:

0.00185

Total prob of N-in:

0.00118

outside

1  -  889

 

 

Pi

3.990137

Theta

162.451919

Tajima's D

-1.289472

CLR

2418.126325

CSRT

0.0885455727213639

Interpretation

Uncertain