Silkworm Genome Informatics Database

Gene

KWMTBOMO02045

Pre Gene Modal

BGIBMGA003202

Annotation

5'-AMP-activated_protein_kinase_subunit_gamma-2_[Papilio_xuthus]

Location

Bomo_Chr4(-):11015668-11023226 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.582

CDS

ATGGATCCAATTTTAGAAAATGAATCTGCCACCACCGAGTCTCCAACCAAACATGGAAAAACAAAACACAAAAATAAGAAGAAGAAAAATCAAGTCGAACCACCAAATGAAAATCAAACCATTGTAGGGGAAAGGAAGAAGTTTCTTGTTACGACATTATCCACATCTGATGAAAAGGTTCCTTCCAGTAGTGTAGCAGAAAGTAATGTACATACAGTCCATTTTGGGACTAGAGGTGTAGAATCCCAAAGGCCTCATGTGAGATCTATTTTTAAAGATCGTTCTGTAGAAACAGCTCGTCCTTCGAGTGCAGATAGAGATTCTAGTAGCAAAGAATATGAAACGTTCCACGGAACATCATCTAGTCCAAAAAGTTCTATTTTTGATATATTTCGCATTAGAAGAAAAAGCGATGCTAAAAAGGCATCAAAACAACAACAATCAAAAACGACCGAAAACCAAGAGATCTCAAAAGATGATCAAAACTTAGTCGATACTAATAAAGATTCACATAAAAAATACTATCATACCGTGACGGGTGCTTCTTCGAGAAAATATAGTCCTATAACTAGGGTAATGGACATTTTCAGAAGCAAACCGCATTCTGAAAATAATCAAACTCCTGCAGATGCAGCGAAAAAGAAAAATTCTAAAGAAGTTCGGCGTTCCTCAATTGGAACTACGTCTCCTACTTATCATAAAAATTCATATGCTTCTCTCGACCCTGTACAAGCCAAGCAATTATTTCGAGAAGTTAGAGGGCTTCCTAAGTATGATCCATATTTATCGATTGTACAAATATCTATCGGAGGTAGAGACAAAACAAGACTTTTGTTAAATTTTTTCAAATATCATAAATGTTACGAGATGTTACCTAAATCAGCAAAAGTTATAATTTTTGATACCCAATTTTATGTCCGTAAGACATTTCCTACTTTAATATCACACGGGATACGTTCTGCACCATTATGGGATGCAAGTAAGAAACTACTCGTTGGTATGATTACGGTAACAGACTTTATTAGAATACTACTTCATCTACACAACGAAAATTTACCTGTTGAAAACTTGGAAAGTCATACTCTTCATAGTTGGAGGAAAATGTTAAGGCACACTAGAAAGCCATTATGTAGTGTATCACCTGATCAATCTCTACATGATGCAATCAATTTACTAACAAAGAATCGTGTTCATCGATTGTTAATGGTTGACCCAGCGAATGGCGATGTTTTATATATTTTATCTCATAAGCGAATATTGAGGTTCCTTTTCGTGTATCTCAATGAATTCCCTGAATTAACGTTCTTTCATAGAACTTTAATCGAATTAAAAATAGGCACATATGATGATATCGTTTCAGTGACAGATAGCACTACTATACAAGCAGCCTTTCAATTATTACTAGATAAAGATGTTTCGGCCCTTCCAATTTTGGATGAAAATGGAACATTGATCGATGTGTACGCAAAATACGAAGTATTAAACTTAGTAAGTGAAAAGCTATATTCAAATTTATCATTGACAATAGGAGACGTTAGAACCAAGAAGAAAGACTGGGAAGAAAAATTACAAAAATGTCGTTCTAGTATCACTTTATATGAGGCCTTAGAAGTAATAGTTAGAACTGAAAGCCATCGACTGTTATTAGTGAACAAAGATGATATGTTAATAGGTATTGTATCTCTATCAGACATATTAGTTTATTTGAATAGAATTATTCCTTCCGAAAAGAAAATTTCCTCACTACAAGAAATATTTCGACCTCTAGAAGAAAATAAAGTACCAGAGTCCTCAAAGGAAAATGAAAGTGACACAATTTCTATAGAAGTCCCAGTTTTAGGGAACCAAGCAGTTCCAGAAGTAAATGAAGAAAAAACTGCGGAGAATGATGATACCGGTGAAGTTTCATGTAATGTCGAATGTGTTGATGCAGAAACGACTGCAGACGGAAACGTTGAAAAAAGCCTCGAAAATGATATTTGTAATGATTGTGATGATGCAGAAATGAATATAGATACTCCCGTAGTCCAATGTTCTAGTAATAATTAA

Protein

MDPILENESATTESPTKHGKTKHKNKKKKNQVEPPNENQTIVGERKKFLVTTLSTSDEKVPSSSVAESNVHTVHFGTRGVESQRPHVRSIFKDRSVETARPSSADRDSSSKEYETFHGTSSSPKSSIFDIFRIRRKSDAKKASKQQQSKTTENQEISKDDQNLVDTNKDSHKKYYHTVTGASSRKYSPITRVMDIFRSKPHSENNQTPADAAKKKNSKEVRRSSIGTTSPTYHKNSYASLDPVQAKQLFREVRGLPKYDPYLSIVQISIGGRDKTRLLLNFFKYHKCYEMLPKSAKVIIFDTQFYVRKTFPTLISHGIRSAPLWDASKKLLVGMITVTDFIRILLHLHNENLPVENLESHTLHSWRKMLRHTRKPLCSVSPDQSLHDAINLLTKNRVHRLLMVDPANGDVLYILSHKRILRFLFVYLNEFPELTFFHRTLIELKIGTYDDIVSVTDSTTIQAAFQLLLDKDVSALPILDENGTLIDVYAKYEVLNLVSEKLYSNLSLTIGDVRTKKKDWEEKLQKCRSSITLYEALEVIVRTESHRLLLVNKDDMLIGIVSLSDILVYLNRIIPSEKKISSLQEIFRPLEENKVPESSKENESDTISIEVPVLGNQAVPEVNEEKTAENDDTGEVSCNVECVDAETTADGNVEKSLENDICNDCDDAEMNIDTPVVQCSSNN

Uniprot

A0A194QSJ7 A0A194PJZ3 A0A0L7LMA4 A0A1E1WHC2 A0A212EHU2 A0A0A1XPX7 + More
A0A0K8VBM4 A0A0K8W0T8 A0A0A1X871 A0A0M5IZJ8 A0A3B0KP46 A0A0A1WR26 A0A023F2X4

Pubmed

26354079 26227816 22118469 25830018 25474469

EMBL

KQ461196 KPJ06516.1 KQ459601 KPI93756.1 JTDY01000586 KOB76560.1 + More
GDQN01004651 JAT86403.1 AGBW02014799 OWR41047.1 GBXI01000923 JAD13369.1 GDHF01016068 JAI36246.1 GDHF01007849 JAI44465.1 GBXI01007357 JAD06935.1 CP012526 ALC45706.1 OUUW01000014 SPP88389.1 GBXI01017028 GBXI01013429 GBXI01004849 JAC97263.1 JAD00863.1 JAD09443.1 GBBI01003256 JAC15456.1

Proteomes

UP000053240 UP000053268 UP000037510 UP000007151 UP000092553 UP000268350 + More

Pfam

PF00571 CBS

Interpro

IPR000644 CBS_dom + More
IPR039170 AMPKG-2

ProteinModelPortal

A0A194QSJ7 A0A194PJZ3 A0A0L7LMA4 A0A1E1WHC2 A0A212EHU2 A0A0A1XPX7 + More
A0A0K8VBM4 A0A0K8W0T8 A0A0A1X871 A0A0M5IZJ8 A0A3B0KP46 A0A0A1WR26 A0A023F2X4

PDB

4REW E-value=1.41976e-67, Score=653

KEGG

101744333 K07200 5'-AMP-activated protein kinase, regulatory gamma subunit | (RefSeq) 5'-AMP-activated protein

PATHWAY

04068 FoxO signaling pathway - Bombyx mori (domestic silkworm)
04213 Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0016301 GO:0032559 GO:0071900 GO:0003824 GO:0008270 GO:0015074 GO:0019752 GO:0030170 GO:0005515 GO:0016876 GO:0043039 GO:0004651 GO:0005634

PANTHER

PTHR13780:SF122

Length:

682

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07942

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00011

outside

1 - 682

Pi

209.768734

Theta

177.48678

Tajima's D

0.61936

CLR

0.099347

CSRT

0.548572571371431

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics