Gene

KWMTBOMO02041

Pre Gene Modal

BGIBMGA002963

Annotation

PREDICTED:_chitin_synthase_A_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr4(+):10834090-10878558      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.2

CDS

ATGGCGACGTCTGGAGGGAAACGGCGAGATGAGGGTAGCGATAACTCTGACGATGAACTCACACCCCTGGCGAACGAAATATATGGTGGAAGTCAGCGCACAGTACAAGAAACGAAAGGATGGGACGTGTTCAGAGAATTTCCGCCGAAACAGGACAGTGTGTCCATGGAGACTCAGAAATGTTTGGAATTCACAGTGCGAATGTTAAAAGTGGTCGCTTACCTGGTCACCTTCATCGTGGTCCTTGGATCAGGAGTTATCGCAAAGGGGACAATTTTGTTCATGACGTCACAAATTAGGAAAGACAAGCGATTAGAATTCTGCAATAAAAACTTAGGTCGAGATAAGCAGTTTGTGGTGAGTTTACCAGACGAGGAGCGTGTTGCCTGGATGTGGGCTATCCTAGCTGCCTTTGCTATTCCGGAATTAGGAACGATGATCAGGTCTATAAGAATATGCTTCTTCAAAACATCAAAGAAGCCGAGTTTTGTACAATTTTCTGTGGTCTTTATCGCTGAGTCCTTACATACCATAGGAATGGGTTTACTATTCTTTAAAATCCTGCCTGAATTAGATGTAGTCAAAGGAGCTATGATAACGAACTGTCTCTGTATAATTCCCGCGGTGCTCGGTCTGCTGTCAAGAAACTCTCGAGACTCGAAACGATTTGTCAAAGTCATCGTCGATATGGCCGCTATAGTTGCGCAAGTGACCGGTTTTATAGTTTGGCCCCTGTTGGAAAACAAAGCTGTTTTGTGGTTGATCCCGATCTCTGCTTTATGTATTTCGTTAGGTTGGTGGGAAAACTATGTGACACGACAAAGTCCAATAGGAATAATCAAAAGCCTGGGGAGACTAAAAGAGGAATTAAATTTTACTCGCTACTTTACGTATCGATTCATCTCCGTGTGGAAGATTTTACTGTTTCTTTTCTGCAATCTATTCTTCATGTGGTTGGACGGAGATGAACCGGCAATGTTTTTCCAACTTTTCAATCCTGGATTTGGGCCACATAGCATTGTCGTTGAAGAGGTTCAAATCCAACTCGGGGGAACGGTTATTCCAGATTTGGCAAACATAACCCTTACAGGAGACTCCGTCGAAATCGCGGCTGTACATAAGTCCGCCGTCTACGTCATGATGATCCAAATATTTGCAGCCTACATCTGCTACATCTTTGGGAAATTTGCTTGCAAAATTGTTATTCAAGGGTTCAGTTACGCTTTTCCGATAAACTTGGTCATACCTTTGGTGGTGAACTTTTTGATTGCTGCTTGTGGTATCAGAAATGGCGACACCTGTTTCTTCCACGGAACGATACCGGACTACCTATTCTTCGAAAGCCCTCCAGTGTTTACGTTGAGCGATTTCATCTCTCGACAAATGGCATGGGTTTGGTTGTTATGGCTGCTATCACAAACCTGGATCACTATTCATATTTGGACCCCCAAAGCAGAACGTTTAGCTTCCACTGAGAAATTGTTTGTGTTGCCTATGTACAATGGTCTACTCATAGACCAAAGTATGGCACTGAATAGGAAAAGAGATGACCATAAGGATGTCAAAACAGAAGATCTTGCCGAAATCGAAAAGGAAAAAGGTGATGAATACTATGAAACAATATCAGTACATACAGACAATACTGGATCTTCCCCAAAGACTGTGAAATCATCAGACCAGATCACGAGGATTTATGCTTGTGCTACTATGTGGCACGAGACCAAAGATGAGATGATGGAGTTCTTGAAATCTATTCTTCGTCTCGATGAAGATCAGTGTGCTCGCCGCGTCGCTCAGAAGTATCTTCGTGTAGTAGATCCTGACTATTACGAATTCGAAACTCACATTTTCTTGGACGACGCTTTCGAAATTTCGGATCATAGTGACGACGAATCTCAAGTAAACCGGTTTGTCAAGCTTCTGGTAGATACCATCGACGAAGCTGCTTCTAATGTACATCAAACGAACATTCGTATACGTCCACCGAAGAGATATCCTGCGCCATACGGAGGTAGACTGACATGGGTGTTACCAGGAAAGACTAAAATGATCTGTCACTTGAAGGATAAGGCAAAGATTCGACACAGGAAACGTTGGTCTCAGGTGATGTACATGTACTACCTTCTCGGTCATCGTCTAATGGAATTGCCTATTTCGGTTGATCGTAAAGAAGTTATGGCTGAGAATACTTACCTGCTTACACTCGATGGAGATATCGATTTCCAACCTCACGCTGTACGATTACTCATTGATTTAATGAAGAAAAACAAGAACCTCGGAGCTGCCTGCGGGCGTATTCACCCTGTTGGATCTGGACCTATGGTGTGGTATCAATTATTCGAGTATGCTATCGGACATTGGCTGCAAAAGGCCACCGAACACATGATCGGCTGCGTGCTCTGTAGTCCCGGATGCTTCTCGCTGTTCAGAGGAAAGGCTCTGATGGACGACAACGTTATGAAGAAATATACTTTGAAATCTGACGAAGCCCGTCACTACGTACAATACGATCAGGGAGAAGATCGATGGCTATGCACTCTGCTACTTCAACGTGGCTATCGTGTAGAATATTCAGCTGCATCGGACGCCTACACCCATTGCCCTGAAGGTTTTAGCGAGTTCTACAATCAACGACGTAGATGGGTGCCTTCGACCATTGCTAACATTATGGACTTGCTTGTGGATTATAAACATACCATTAAAATCAATGACAATATTTCCTCACCGTACATCGCATACCAGATGATGTTGATGGGCGGTACGATTCTGGGACCTGGAACTATATTTCTTATGTTGGTGGGTGCTTTTGTGGCCGCTTTTAGAATTGATAATTGGACATCCTTCGAATACAATCTATATCCTATAATGTTGTTTATGTTTGTTTGTTTCACAATGAAGTCAGAATATCAATTATTGGTCGCGCAAATATTATCAACGGCCTATGCTATGATAATGATGGCTGTAATTGTGGGTACAGCACTGCAATTAGGCGAGGACGGTATCGGATCCCCATCCGCTATATTCTTGATTTCACTGTCAAGTTCTTTCTTTATAGCGGCCTGTTTACATCCCCAGGAGTTTTGGTGTATCGTTCCCGGTATCATTTATCTATTATCTATACCCTCTATGTACTTGCTTTTGATTTTGTATTCTATTATAAATCTGAATGTAGTATCGTGGGGTACGCGAGAAGTGCAAACCAAGAAAACAAAGAAGGAAATCGAGCAAGAAAAGAAAGATGCCGAAGAGGCGAAAAAGAAGGCGAAACAAAAGTCCCTTCTTGGTTTCCTGCAGGGTGTCAATTCTAACGAAGAGGAAGGCTCCATAGAACTATCGTTTGCTGGTCTTTTTAAATGTTTACTGTGTACTCATCCTAAAGGAAACGAAGAAAAAGTACAGCTCATGCATATCGCTTCAACACTTGAGAAATTGGAAAAGAAAATTGAAAACGTCGAGAAGGCCGTGGATCCGCACGGTCTATCCAGAAGTCGCAAACTATCGCTAGGCCCTCGTGGTAGCACTAACGGAGACCACCAGTTGGACGCTCTTAATGAGGACCCCGAAGAAGAAAACGATTCCGATTCCGACACCGGCACTCTATCCACTGAACCAAGGGAACGACGAGATGATCTTATAAATCCATATTGGATTGAGGATCCCGGCTTGAAAAAAGGCGAAGTAGATTTCTTGAGCCCGCCCGAGGTACAATTCTGGAAAGACCTTATTGACAAGTATTTATATCCTATTGACGAAGACAAGGACGAGAAGGCTCGCATAGCAGGCGATCTACTAGAACTTCGCAATAAATCAGTTTTCGCATTTGTTATGTTCAATGCTTTATTTATATTGATAGTATTTTTATTACAACTCAATAAAGATCAGCTTCACGTGGTCTGGCCTTTGGGAGTTAAGACAAACATTACGTACATGGAGGAAACAGGCCAGCTTCTCATCTCGAAGGAATACTTGCAATTAGAGCCTATCGGTCTGGTATTTGTGTTCTTCTTTGCCTTGATTTTGGTCATACAATTTTCGGCCATGTTGTTCCATCGATTCGGAACTATTTCGCATATTCTATCATCGACGGATCTCAACTGGTTCTGTTCAAAGAAATCGGAAGATTTGTCACAGGATGCGCTTTTGGATAAGAATGCAATAGCAATAGTGAAAGACCTTCAGAAATTAAACGGTCTGGACGATGATTATGATAACGATTCAGGATCTGGACCACACAACGTCGGCCGAAGGAAGACAATACACAATTTAGAGAAAGCTAGACAGAAGAAACGTAACATAGGAACACTAGATGTGGCTTTCAAGAAACGATTCTTCAATATGAATGCTAATGATGGTCCGGGTACCCCAGTTTTAAATCGTAAAATGACATTGAGAAGGGAGACATTGAAAGCTTTAGAGACCCGTCGTAACTCTGTAATGGCAGAAAGAAGGAAGTCGCAAATGCAGACACTTGGCGCTAATAATGAATACGGTGTTACTGGAATGCTCAATAATAACGTTGGACCTCGTCATAGAGCATCGAATGCTAATATTTCAGTGAAGGATGTATTCTCGGAGCCCAACGGAGGACAGATCAACAGGGCCTACGAAGCCTCACTCGGGGACGACGATGACTCAAATTCCATGCGACTTCAGCCAAGACAAAACCAAGTTTCATTCCAAGGGAGGTTTTAA

Protein

MATSGGKRRDEGSDNSDDELTPLANEIYGGSQRTVQETKGWDVFREFPPKQDSVSMETQKCLEFTVRMLKVVAYLVTFIVVLGSGVIAKGTILFMTSQIRKDKRLEFCNKNLGRDKQFVVSLPDEERVAWMWAILAAFAIPELGTMIRSIRICFFKTSKKPSFVQFSVVFIAESLHTIGMGLLFFKILPELDVVKGAMITNCLCIIPAVLGLLSRNSRDSKRFVKVIVDMAAIVAQVTGFIVWPLLENKAVLWLIPISALCISLGWWENYVTRQSPIGIIKSLGRLKEELNFTRYFTYRFISVWKILLFLFCNLFFMWLDGDEPAMFFQLFNPGFGPHSIVVEEVQIQLGGTVIPDLANITLTGDSVEIAAVHKSAVYVMMIQIFAAYICYIFGKFACKIVIQGFSYAFPINLVIPLVVNFLIAACGIRNGDTCFFHGTIPDYLFFESPPVFTLSDFISRQMAWVWLLWLLSQTWITIHIWTPKAERLASTEKLFVLPMYNGLLIDQSMALNRKRDDHKDVKTEDLAEIEKEKGDEYYETISVHTDNTGSSPKTVKSSDQITRIYACATMWHETKDEMMEFLKSILRLDEDQCARRVAQKYLRVVDPDYYEFETHIFLDDAFEISDHSDDESQVNRFVKLLVDTIDEAASNVHQTNIRIRPPKRYPAPYGGRLTWVLPGKTKMICHLKDKAKIRHRKRWSQVMYMYYLLGHRLMELPISVDRKEVMAENTYLLTLDGDIDFQPHAVRLLIDLMKKNKNLGAACGRIHPVGSGPMVWYQLFEYAIGHWLQKATEHMIGCVLCSPGCFSLFRGKALMDDNVMKKYTLKSDEARHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAYTHCPEGFSEFYNQRRRWVPSTIANIMDLLVDYKHTIKINDNISSPYIAYQMMLMGGTILGPGTIFLMLVGAFVAAFRIDNWTSFEYNLYPIMLFMFVCFTMKSEYQLLVAQILSTAYAMIMMAVIVGTALQLGEDGIGSPSAIFLISLSSSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLLLILYSIINLNVVSWGTREVQTKKTKKEIEQEKKDAEEAKKKAKQKSLLGFLQGVNSNEEEGSIELSFAGLFKCLLCTHPKGNEEKVQLMHIASTLEKLEKKIENVEKAVDPHGLSRSRKLSLGPRGSTNGDHQLDALNEDPEEENDSDSDTGTLSTEPRERRDDLINPYWIEDPGLKKGEVDFLSPPEVQFWKDLIDKYLYPIDEDKDEKARIAGDLLELRNKSVFAFVMFNALFILIVFLLQLNKDQLHVVWPLGVKTNITYMEETGQLLISKEYLQLEPIGLVFVFFFALILVIQFSAMLFHRFGTISHILSSTDLNWFCSKKSEDLSQDALLDKNAIAIVKDLQKLNGLDDDYDNDSGSGPHNVGRRKTIHNLEKARQKKRNIGTLDVAFKKRFFNMNANDGPGTPVLNRKMTLRRETLKALETRRNSVMAERRKSQMQTLGANNEYGVTGMLNNNVGPRHRASNANISVKDVFSEPNGGQINRAYEASLGDDDDSNSMRLQPRQNQVSFQGRF

Uniprot

Q8T4U2   A0A2A4K4Z2   A0A0K0TR45   Q3I5Q4   A0A2A4K4F7   A0A2L1CDD1   + More
H2BDN4   A0A0G2RLM5   A0A0G3DJ83   A0A0K0TR58   A0A0S1LL44   A9QMN8   A0A2L1CD87   B5L588   H2BDN3   A0A0K1YBZ4   B4YIR0   C7S7D7   A0A1L4A1P9   A3KCN0   A0A1B2ZDH8   B2ZDM3   B1PN77   A0A1I9RYC4   A0A2H1WF34   A0A194PL82   A0A194QLT7   A0A2A4K650   A0A182VMC5   Q7PUN7   Q1ZZR2   A0A2P1E8Q3   B0XAX6   A0A1J1IKF4   Q6WD22   B4PV91   Q9I7P4   A0A1W4UWX3   B3LZI9   A0A1I8Q2C1   Q296C2   Q6WD23   B4NB87   A0A1B0CKB6   A0A172ESF1   Q8IPN4   A0A0R1E4U3   A0A2Z4C0Y5   A0A1W4UWM0   A0A0P8XXP4   A0A1I8Q2C5   A0A336M9A9   A0A0Q9X523   A0A1I8NCU8   I5APC8   B4KC00   L0L3M2   B4M5F3   A0A336L9R3   A0A336MER8   A0A0A1XJD1   A0A172ET69   A0A0M5J1X5   A0A0K8WH99   A0A336MLD4   A0A336LC89   A0A1I8NCU1   T1PGZ3   I6QMM4   G9FTE9   A0A1J1IH31   A0A023F5X0   A0A1A9WTY3   A0A286QVM7   A0A2Z4BZP6   I6P4U3   Q9GU17   A0A286QVM4   I6P4A4   I6P593   E5FQV6   I6NVU6   A0A146LT09   A0A1B6CU26   A0A0F6N0E4   E0VBV3   D0VED4   D0VED3   K7ILU4   A0A3G4RHT7   A0A158NM54   A0A2H8TRG4   A0A1B6ETN5   A0A1L2DBW4   I1YDC4   X1WRK9   E2B1T7   A0A026WIC7   A0A2S2QAZ0  

Pubmed

12530217    22607200    26253161    21181720    27930336    26354079    + More
12364791    14747013    17210077    16935220    14871625    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    18362917    19820115    27030662    26109357    26109356    18057021    25315136    23185243    25830018    25474469    22634163    10998064    26823975    20566863    20713155    20075255    21347285    23139631    20798317    24508170   

EMBL

AY062175    AAL38051.2    NWSH01000140    PCG79139.1    KP728469    AKR54211.1    + More
DQ062153    AAZ03545.1    PCG79141.1    MF000782    AVB77310.1    HQ840515    ADX66429.1    KP000843    AJG44538.1    KP939100    AKJ54482.1    KP728468    AKR54210.1    KT932387    ALL29158.1    GQ281761    ABX56676.2    MF000781    AVB77309.1    EU376026    ACB13821.1    ADX66428.1    KT302158    AKZ08594.1    EU563936    ACF53745.1    EU561238    ACD84882.1    KX420690    API61827.1    KX420688    KX420689    AB271784    API61825.1    API61826.1    BAF47974.1    KU720384    AOE23678.1    EU644450    ACD10533.1    EU482034    ACA50098.1    KT948989    AOZ56906.1    ODYU01008242    SOQ51661.1    KQ459601    KPI93758.1    KQ461196    KPJ06518.1    PCG79140.1    AAAB01008987    EAA01253.6    DQ415985    ABD74441.1    MH013352    AVL25106.1    DS232602    EDS43946.1    CVRI01000051    CRK99558.1    AY291476    AY295880    AAQ55060.1    AAQ62694.1    CM000160    EDW95760.2    AE014297    AAG22215.3    CH902617    EDV41931.2    CM000070    EAL28536.3    AY291475    KQ971343    AAQ55059.1    AAQ62693.1    EFA04340.2    CH964232    EDW81051.2    AJWK01015962    AJWK01015963    AJWK01015964    KT964741    ALM23645.1    AAN13280.1    AAS65101.1    KRK02706.1    KRK02707.1    MH119584    AWU68202.1    KPU79437.1    KPU79438.1    UFQT01000733    SSX26815.1    KRF99383.1    EIM52813.1    KRT00795.1    KRT00796.1    CH933806    EDW15852.2    JX170758    AGB51153.1    CH940652    EDW59864.2    KRF79120.1    KRF79121.1    KRF79122.1    KRF79123.1    KRF79124.1    UFQS01002491    UFQT01002491    SSX14154.1    SSX33570.1    SSX26817.1    GBXI01002833    JAD11459.1    KT964740    KT305921    ALM23644.1    AMN92725.1    CP012526    ALC45948.1    GDHF01001875    JAI50439.1    SSX26818.1    SSX14155.1    SSX33571.1    KA647158    AFP61787.1    JQ398680    AFM38193.1    JN207848    AEN03040.1    CRK99557.1    GBBI01002124    JAC16588.1    KY987035    KY350144    ASU54784.1    AUX15050.1    MH119585    AWU68203.1    JQ040013    AFC61180.1    AF221067    AAG09712.1    KY987034    KY350143    ASU54783.1    AUX15049.1    JQ040014    AFC61181.1    JQ040011    AFC61178.1    HM600729    ADR73029.1    JQ040012    AFC61179.1    GDHC01008717    JAQ09912.1    GEDC01020427    JAS16871.1    KF147149    AHY28559.1    DS235042    EEB10859.1    GU067731    ACY38589.1    GU067730    ACY38588.1    MH934187    AYU65264.1    ADTU01020260    ADTU01020261    ADTU01020262    GFXV01004960    MBW16765.1    GECZ01028676    JAS41093.1    KR611528    ANA76489.1    JQ246352    AFJ00066.1    ABLF02020592    GL444956    EFN60358.1    KK107238    EZA54859.1    GGMS01005693    MBY74896.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000075903    UP000007062    UP000002320    + More
UP000183832    UP000002282    UP000000803    UP000192221    UP000007801    UP000095300    UP000001819    UP000007266    UP000007798    UP000092461    UP000095301    UP000009192    UP000008792    UP000092553    UP000091820    UP000009046    UP000002358    UP000005205    UP000007819    UP000000311    UP000053097   

PRIDE

Q9I7P4    Q8IPN4   

Pfam

PF07001   BAT2_N

Interpro

IPR029044   Nucleotide-diphossugar_trans        + More
IPR004835   Chitin_synth       
IPR009738   BAT2_N       
IPR020846   MFS_dom       

SUPFAM

SSF53448   SSF53448       

Gene 3D

3.90.550.10    

CDD

cd06174  MFS

ProteinModelPortal

Q8T4U2   A0A2A4K4Z2   A0A0K0TR45   Q3I5Q4   A0A2A4K4F7   A0A2L1CDD1   + More
H2BDN4   A0A0G2RLM5   A0A0G3DJ83   A0A0K0TR58   A0A0S1LL44   A9QMN8   A0A2L1CD87   B5L588   H2BDN3   A0A0K1YBZ4   B4YIR0   C7S7D7   A0A1L4A1P9   A3KCN0   A0A1B2ZDH8   B2ZDM3   B1PN77   A0A1I9RYC4   A0A2H1WF34   A0A194PL82   A0A194QLT7   A0A2A4K650   A0A182VMC5   Q7PUN7   Q1ZZR2   A0A2P1E8Q3   B0XAX6   A0A1J1IKF4   Q6WD22   B4PV91   Q9I7P4   A0A1W4UWX3   B3LZI9   A0A1I8Q2C1   Q296C2   Q6WD23   B4NB87   A0A1B0CKB6   A0A172ESF1   Q8IPN4   A0A0R1E4U3   A0A2Z4C0Y5   A0A1W4UWM0   A0A0P8XXP4   A0A1I8Q2C5   A0A336M9A9   A0A0Q9X523   A0A1I8NCU8   I5APC8   B4KC00   L0L3M2   B4M5F3   A0A336L9R3   A0A336MER8   A0A0A1XJD1   A0A172ET69   A0A0M5J1X5   A0A0K8WH99   A0A336MLD4   A0A336LC89   A0A1I8NCU1   T1PGZ3   I6QMM4   G9FTE9   A0A1J1IH31   A0A023F5X0   A0A1A9WTY3   A0A286QVM7   A0A2Z4BZP6   I6P4U3   Q9GU17   A0A286QVM4   I6P4A4   I6P593   E5FQV6   I6NVU6   A0A146LT09   A0A1B6CU26   A0A0F6N0E4   E0VBV3   D0VED4   D0VED3   K7ILU4   A0A3G4RHT7   A0A158NM54   A0A2H8TRG4   A0A1B6ETN5   A0A1L2DBW4   I1YDC4   X1WRK9   E2B1T7   A0A026WIC7   A0A2S2QAZ0  

KEGG

100884166    K00698 chitin synthase [EC:2.4.1.16] | (RefSeq) chitin synthase A

PATHWAY

00520    Amino sugar and nucleotide sugar metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0004100   GO:0016021   GO:0016758   GO:0030428   GO:0006035   GO:0045177   GO:0007424   GO:0009611   GO:0008362   GO:0060439   GO:0006031   GO:0005737   GO:0007443   GO:0035158   GO:0035159   GO:0001838   GO:0035149   GO:0035002  

PANTHER

PTHR22914  

Length:

1563

Number of predicted TMHs:

16

Exp number of AAs in TMHs:

350.93252

Exp number, first 60 AAs:

0

Total prob of N-in:

0.99759

inside

1  -  70

TMhelix

71  -  93

outside

94  -  127

TMhelix

128  -  150

inside

151  -  162

TMhelix

163  -  185

outside

186  -  195

TMhelix

196  -  213

inside

214  -  225

TMhelix

226  -  245

outside

246  -  249

TMhelix

250  -  267

inside

268  -  299

TMhelix

300  -  319

outside

320  -  375

TMhelix

376  -  398

inside

399  -  404

TMhelix

405  -  427

outside

428  -  914

TMhelix

915  -  937

inside

938  -  949

TMhelix

950  -  967

outside

968  -  971

TMhelix

972  -  994

inside

995  -  1000

TMhelix

1001  -  1023

outside

1024  -  1032

TMhelix

1033  -  1055

inside

1056  -  1270

TMhelix

1271  -  1290

outside

1291  -  1326

TMhelix

1327  -  1349

inside

1350  -  1563

 

 

Pi

252.159962

Theta

185.423712

Tajima's D

0.877747

CLR

0.484825

CSRT

0.622568871556422

Interpretation

Uncertain