Gene

KWMTBOMO02037

Annotation

ras-related_protein_Rab7_[Bombyx_mori]

Location

Bomo_Chr4(+):10764850-10766046      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.11 Nuclear   Reliability : 1.022

CDS

ATGGCTGTTGTAAAAACTCCTGTATTGAAAGTAATTTTGTGTGGTGAATACGGTGTTGGAAAGAGTTCATTATTTCGCAGGTTCATTAACAATACCTTTGTTCCAAACTCTGATCGAAGGGCGACTTTAGGTTTAGATCATTTCGAGAAGTTGTACCAAGTTGCGGACAAAGATGTCAAGTTGCAGTTATGGGATACTGGAGGTATGGAAAGAATAGCTTCGGTGACATCAAGCTATTATAAATTTGCTGAAGCTGCAATTTTGGTCTTTTCACTGGACAATGCTTCATCGTTTCATATTTTGAGTCAACATTTACTTGAAATTGTATCTTATGCAGAAAACGCAAAGATATTTTTATGTGGAAATAAATCTGATTTGGAAGGAGCATCTCCTCAAGTTACTGATGCTGATATTGAGACTTTCTGTGAGCAGTGCCACAATTTAGTAAATAGCACATACAAAACTTCATGCAAAACTGGCAAAGGTATTGAAGAAATGTTTGCCGATATTGCCCTTCAACTGGTTGAAGCAAACAGATCTAGGATTGAACTGCAGGCCTTGGATCAAAATAGTTTTAAAATTTCAAACCCTGATCAACCACAAGAGCCATCATGTAGCTGTTAA

Protein

MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFSLDNASSFHILSQHLLEIVSYAENAKIFLCGNKSDLEGASPQVTDADIETFCEQCHNLVNSTYKTSCKTGKGIEEMFADIALQLVEANRSRIELQALDQNSFKISNPDQPQEPSCSC

Uniprot

Q2F5M5   A0A194QLW9   A0A194PJZ8   H2BDN1   A0A2A4K4H6   A0A2H1VZL7   + More
A0A1Z2RRM6   A0A212EHS2   A0A0L7KSQ8   S4PKS4   A0A1B0CW23   A0A2J7QU39   A0A1L8DV44   A0A1B6DV08   A0A1L8DV58   A0A067REL3   A0A224XSZ8   A0A023F8H0   D6WLY5   A0A1B6KJB0   B4H4A6   A0A2A3E7X4   A0A1Y1LAF2   Q29DW5   A0A195DJ56   A0A195FHZ7   E2AMS1   A0A154P5D6   A0A0J7KXY5   A0A158ND74   B4LGK3   A0A2R7WCR8   A0A151I8N7   A0A0M4EYK1   A0A3B0KQJ4   A0A0L7R686   A0A1B6GUS6   A0A1W4XDB2   A0A182NER2   A0A195B0U4   A0A182QYA8   E9J2D0   A0A182P9I2   A0A182VUL2   A0A182JE94   A0A084VM57   B4L0B3   A0A182M1V6   E0VTY1   A0A182RAV2   A0A182YNG0   A0A182V9V8   A0A182TZX4   A0A182X0N6   A0A182HGC2   Q7QGF8   B4J2S1   A0A1S3D2V5   W8BRF7   A0A1I8P4T5   A0A182L6J8   A0A1A9Y3F7   A0A1B0ASD2   A0A0A9WRJ0   A0A2M4AY40   A0A182F665   A0A0P4VV83   D3TRC5   A0A1A9VMK0   A0A1B0AEJ4   A0A1S4FM77   A0A182JW22   B4MLC2   A0A1I8N1V4   Q16W42   A0A0T6BBH6   A0A026WY81   B3MAE1   A0A182G7J7   A0A1A9WW86   A0A0K8SSZ8   A0A034WCR6   A0A0K8W3H3   B0WYG1   A0A0A1WJ01   A0A2M4BZZ0   A0A0L0C069   A0A1Q3FLZ6   B4QLE3   B4PCM2   B3NJA9   A0A1W4W5K2   W5JJC6   A0A1B0FRD9   B4HVI8   Q9W0N7   M9PE35   G3MSI9   A0A224Z7J0   A0A131YKK6  

Pubmed

26354079    28605547    22118469    26227816    23622113    24845553    + More
25474469    18362917    19820115    17994087    28004739    15632085    20798317    21347285    21282665    24438588    20566863    25244985    12364791    24495485    20966253    25401762    26823975    20353571    25315136    17510324    24508170    26483478    25348373    25830018    26108605    22936249    17550304    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22216098    28797301    26830274   

EMBL

DQ311398    ABD36342.1    KQ461196    KPJ06522.1    KQ459601    KPI93761.1    + More
HQ840515    ADX66426.1    NWSH01000140    PCG79147.1    ODYU01005437    SOQ46279.1    KY963166    ASA46486.1    AGBW02014799    OWR41053.1    JTDY01006087    KOB66303.1    GAIX01004350    JAA88210.1    AJWK01031590    NEVH01011191    PNF32085.1    GFDF01003776    JAV10308.1    GEDC01007829    JAS29469.1    GFDF01003775    JAV10309.1    KK852514    KDR22192.1    GFTR01003478    JAW12948.1    GBBI01001087    JAC17625.1    KQ971343    EFA04187.1    GEBQ01028451    JAT11526.1    CH479208    EDW31221.1    KZ288335    PBC27863.1    GEZM01061231    GEZM01061230    JAV70619.1    CH379070    EAL30299.2    KQ980800    KYN12915.1    KQ981560    KYN39892.1    GL440887    EFN65273.1    KQ434822    KZC07139.1    LBMM01002178    KMQ95176.1    ADTU01012470    CH940647    EDW69441.2    KK854631    PTY17467.1    KQ978338    KYM95023.1    CP012525    ALC43282.1    OUUW01000012    SPP87491.1    KQ414646    KOC66397.1    GECZ01003666    JAS66103.1    KQ976690    KYM78081.1    AXCN02000844    GL767845    EFZ12980.1    ATLV01014579    KE524975    KFB39051.1    CH933809    EDW18059.2    AXCM01001945    DS235775    EEB16837.1    APCN01004213    AAAB01008835    EAA05778.3    CH916366    EDV96062.1    GAMC01004873    JAC01683.1    JXJN01002732    GBHO01032547    GDHC01000232    JAG11057.1    JAQ18397.1    GGFK01012344    MBW45665.1    GDRN01106544    JAI57555.1    EZ423977    ADD20253.1    CH963847    EDW73380.2    CH477575    EAT38811.1    LJIG01002495    KRT84445.1    KK107070    EZA60691.1    CH902618    EDV40192.1    JXUM01150384    KQ570986    KXJ68267.1    GBRD01009520    JAG56304.1    GAKP01007027    JAC51925.1    GDHF01006707    JAI45607.1    DS232188    EDS37038.1    GBXI01015939    JAC98352.1    GGFJ01009506    MBW58647.1    JRES01001084    KNC25673.1    GFDL01006507    JAV28538.1    CM000363    CM002912    EDX08716.1    KMY96708.1    CM000159    EDW92745.2    CH954178    EDV50071.2    ADMH02001356    ETN62889.1    CCAG010000500    CH480817    EDW49953.1    AE014296    AY071647    AAF47406.1    AAL49269.1    AGB93914.1    JO844840    AEO36457.1    GFPF01011216    MAA22362.1    GEDV01009482    JAP79075.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000007151    UP000037510    UP000092461    + More
UP000235965    UP000027135    UP000007266    UP000008744    UP000242457    UP000001819    UP000078492    UP000078541    UP000000311    UP000076502    UP000036403    UP000005205    UP000008792    UP000078542    UP000092553    UP000268350    UP000053825    UP000192223    UP000075884    UP000078540    UP000075886    UP000075885    UP000075920    UP000075880    UP000030765    UP000009192    UP000075883    UP000009046    UP000075900    UP000076408    UP000075903    UP000075902    UP000076407    UP000075840    UP000007062    UP000001070    UP000079169    UP000095300    UP000075882    UP000092443    UP000092460    UP000069272    UP000078200    UP000092445    UP000075881    UP000007798    UP000095301    UP000008820    UP000053097    UP000007801    UP000069940    UP000249989    UP000091820    UP000002320    UP000037069    UP000000304    UP000002282    UP000008711    UP000192221    UP000000673    UP000092444    UP000001292    UP000000803   

PRIDE

Q2F5M5    Q9W0N7    M9PE35   

Pfam

PF00071   Ras

Interpro

IPR001806   Small_GTPase        + More
IPR027417   P-loop_NTPase       
IPR005225   Small_GTP-bd_dom       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

Q2F5M5   A0A194QLW9   A0A194PJZ8   H2BDN1   A0A2A4K4H6   A0A2H1VZL7   + More
A0A1Z2RRM6   A0A212EHS2   A0A0L7KSQ8   S4PKS4   A0A1B0CW23   A0A2J7QU39   A0A1L8DV44   A0A1B6DV08   A0A1L8DV58   A0A067REL3   A0A224XSZ8   A0A023F8H0   D6WLY5   A0A1B6KJB0   B4H4A6   A0A2A3E7X4   A0A1Y1LAF2   Q29DW5   A0A195DJ56   A0A195FHZ7   E2AMS1   A0A154P5D6   A0A0J7KXY5   A0A158ND74   B4LGK3   A0A2R7WCR8   A0A151I8N7   A0A0M4EYK1   A0A3B0KQJ4   A0A0L7R686   A0A1B6GUS6   A0A1W4XDB2   A0A182NER2   A0A195B0U4   A0A182QYA8   E9J2D0   A0A182P9I2   A0A182VUL2   A0A182JE94   A0A084VM57   B4L0B3   A0A182M1V6   E0VTY1   A0A182RAV2   A0A182YNG0   A0A182V9V8   A0A182TZX4   A0A182X0N6   A0A182HGC2   Q7QGF8   B4J2S1   A0A1S3D2V5   W8BRF7   A0A1I8P4T5   A0A182L6J8   A0A1A9Y3F7   A0A1B0ASD2   A0A0A9WRJ0   A0A2M4AY40   A0A182F665   A0A0P4VV83   D3TRC5   A0A1A9VMK0   A0A1B0AEJ4   A0A1S4FM77   A0A182JW22   B4MLC2   A0A1I8N1V4   Q16W42   A0A0T6BBH6   A0A026WY81   B3MAE1   A0A182G7J7   A0A1A9WW86   A0A0K8SSZ8   A0A034WCR6   A0A0K8W3H3   B0WYG1   A0A0A1WJ01   A0A2M4BZZ0   A0A0L0C069   A0A1Q3FLZ6   B4QLE3   B4PCM2   B3NJA9   A0A1W4W5K2   W5JJC6   A0A1B0FRD9   B4HVI8   Q9W0N7   M9PE35   G3MSI9   A0A224Z7J0   A0A131YKK6  

PDB

2EW1     E-value=7.37009e-23,     Score=261

KEGG

692967    no KO assigned | (RefSeq) ras-related protein Rab7

GO

GO:0003924   GO:0005525   GO:0006886   GO:0032482   GO:0005623   GO:0043025   GO:0031982   GO:0016192   GO:0007264   GO:0006520   GO:0019752   GO:0030170   GO:0005515   GO:0016876   GO:0043039   GO:0004651   GO:0005634  

Length:

207

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04572

Exp number, first 60 AAs:

0.01467

Total prob of N-in:

0.08932

outside

1  -  207

 

 

Pi

12.670736

Theta

13.522778

Tajima's D

-0.188365

CLR

1.226611

CSRT

0.330783460826959

Interpretation

Uncertain