SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02026
Pre Gene Modal
BGIBMGA002954
Annotation
PREDICTED:_protein_PIH1D3-like_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 3.075
 

Sequence

CDS
ATGGAATTCTCACCATCCACCATGGAGAAGTTGGCTGAATTATTTAGACCTCCAGAACCAGATGTTTTTCAGGGTGAAGATTTCACACCAACCGAATATGAAATAACATCGGTAAGAGGTAAAATACCGGCTACAGAAAGAGATCCTAAAGATCCTAAAACGATTGAGGAATATGAAGAGCTGGAGGACAGAGCTGCTGAAGATTTATGTCGTATCGGAGCTGGCCTCGATGATCGTAAAACTCCACAGTACACAATGAACTATCAGCAATCTGTTTCGGCGGAAGATGTATTTCTTCAGATTGGTCCTAAAACTCCGTCTTCGGCTAGTTGTGAAAATATTGTGATAAGAATAAAAATGCCAGGAGATAAAAAAGAGAATGTTGATTTAAACGTAGATCGAACAACCGTAACTGTAAATTCTTCACAATACACCTTGAATTTACCATTACCACATGGCATCGATCCAGATTTATCTAAAGCCAACTGGGATACTGCTGAAGATATGCTAGTCTTAACCCTTAAATTGGATAGAGAGTTTGATTTTGTTAATTTCTGA
Protein
MEFSPSTMEKLAELFRPPEPDVFQGEDFTPTEYEITSVRGKIPATERDPKDPKTIEEYEELEDRAAEDLCRIGAGLDDRKTPQYTMNYQQSVSAEDVFLQIGPKTPSSASCENIVIRIKMPGDKKENVDLNVDRTTVTVNSSQYTLNLPLPHGIDPDLSKANWDTAEDMLVLTLKLDREFDFVNF

Summary

Pfam
PF18201   PIH1_CS
Interpro
IPR026697   PIH1D3        + More
IPR007052   CS_dom       
IPR008978   HSP20-like_chaperone       
IPR041442   PIH1D1/2/3_CS-like       
SUPFAM
SSF49764   SSF49764       
Gene 3D

Ontologies

GO

Topology

Length:
185
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05844
outside
1  -  185
 
 

Population Genetic Test Statistics

Pi
234.596478
Theta
179.338327
Tajima's D
1.030487
CLR
0
CSRT
0.669016549172541
Interpretation
Uncertain
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