SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02024
Pre Gene Modal
BGIBMGA003209
Annotation
PREDICTED:_protein_enabled_homolog_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.977
 

Sequence

CDS
ATGGTTTGCAAAGAGGACGTGGTATCATGGTTTAAAGAATTGGAAAGCTATAAACGCATAGATGCAATGTGTACACTGTTAAATATGTGTTTACCATTCGAATTGCGCTTCATCGGCACGTACCTAGAAGAGCTCGGTAAGCGGGACTTTCAGGAGTTGCGTGGTGCCGAACTGAGAGCTAACAATCCTACAGATCTGGCTGCGGACATAGGAGGAGCAAATGCAGACCCTAGAACACGACGAAAAATGGCTTTATATGTGTCGTTATTACGATCTTGTAATTTCGCGTGTGCTACAACTCTGTACAATGCCATGGTCAGTTTGGAACAAAGTGGCCTATTGAAGGGCTTATATGGAGATTTACTCGAAGAAATTTTATTGTTGTATACAATGGCACTACATCACCCAGCCTTCACATTTGATCAGAAATCACATTTTGGTGACATTTTGGAAAAATTAAAATTGGAAGATCAACGAATGCAATATCCAGAACAGCAAGAACACATAAATGTAGTGCCAGTGAGTGGTGGCCATACACAGTCCAATATCACCTCCAATATCACAGTTCCACCACCATCCTTATCAAACATGGCTCCACCACCAGGTTTGATGTTTGTCAAAACACCTGGGGTGCAGGCCCAAAACGCAGATGTAGTGTCTGAATTAAATACACAGCCTGTACTTGGTGGAACTGGTGTTGTACCAATTTTGAGTGAGGTACCACATCCACCACCCGGAATACCTATACCACAATATCATAATATTGGAGATTACATGGGACAACATGCCTGGCCTACGAACATCATTGTCTCAGCCTTAAACCAGCCCCTAGAGGTAATAAATTATCCTCCAGCTGCTGCTGCTCCAACATCTCCCTTAGTTTCTTCACCAGGTGACAGTCGGGCAACATCGCCACACTCTCGTCGAAGACTATCTCGTGACCGATCGCCGCCACTACAGTCTGTCACATCTGGCCCTCCCGAACCGACCCCCCTACAAATATCTACCAACTTTGAAAACCTGGCTATTGCAGAGATGCGACACAATATAGGTGATGAGAGATTACGAGAACTCGGAATTCATCAGTACAGGTCTTTAGAAAAGTTGAACGGAGTTCGAAGAAGAGCGACAGCATATTGCCCCCCCACACGATCGTCATCAGACAGTGGCTCCAGTGCGGCTTCGTCTCCTCCCGACACTCCCGCTCTGTCGCTACGTCGCGGTGCTCCTTCCGCGCCGCCCGTTTCTTATCTGCAGTATCCGAGACCCTACGCCTTCCCCACCCCTCCACCTGCCTACCGCCCGCCGCCGCCCCCCTTCGCGAACGGCGAACCCCCTCCGTACCCGGCCCCCACTCCTTACGCTGGATTTGTGCCGGTCTTATACGCGCCGCCGAAACTTTCCTGCTGGAACTGCGGCGCTGCAGGTCACGCAGGACACGAATGTAAAGAGCCGAGCATGGAAGAGATGACGAGGGCAGGTGGATATCAGTTAGACTTTGGTGGTGCTCCGCCGGAGTCGACGGAGAAATAG
Protein
MVCKEDVVSWFKELESYKRIDAMCTLLNMCLPFELRFIGTYLEELGKRDFQELRGAELRANNPTDLAADIGGANADPRTRRKMALYVSLLRSCNFACATTLYNAMVSLEQSGLLKGLYGDLLEEILLLYTMALHHPAFTFDQKSHFGDILEKLKLEDQRMQYPEQQEHINVVPVSGGHTQSNITSNITVPPPSLSNMAPPPGLMFVKTPGVQAQNADVVSELNTQPVLGGTGVVPILSEVPHPPPGIPIPQYHNIGDYMGQHAWPTNIIVSALNQPLEVINYPPAAAAPTSPLVSSPGDSRATSPHSRRRLSRDRSPPLQSVTSGPPEPTPLQISTNFENLAIAEMRHNIGDERLRELGIHQYRSLEKLNGVRRRATAYCPPTRSSSDSGSSAASSPPDTPALSLRRGAPSAPPVSYLQYPRPYAFPTPPPAYRPPPPPFANGEPPPYPAPTPYAGFVPVLYAPPKLSCWNCGAAGHAGHECKEPSMEEMTRAGGYQLDFGGAPPESTEK

Summary

Interpro
IPR001878   Znf_CCHC       

Ontologies

Topology

Length:
510
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
7.69573
Exp number, first 60 AAs:
0.18119
Total prob of N-in:
0.34190
outside
1  -  510
 
 

Population Genetic Test Statistics

Pi
228.53071
Theta
190.776987
Tajima's D
0.622787
CLR
0.160217
CSRT
0.546172691365432
Interpretation
Uncertain
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