Gene

KWMTBOMO02019

Annotation

transposase_[Bombyx_mori]

Location

Bomo_Chr4(-):10343749-10344960      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.391 Nuclear   Reliability : 1.845

CDS

ATGGAGTGGGGTGATAAAGAGAACCGAATCGCTGTGATTGCATTACACAAAGTAGGTATGGAGCCAAATGCAATTTTTAAAACTCTCCATACGCTTGGTATTAGTAACATGTTTGTGTACCGGGCTATTAATAGGTGCAATGAGACCTCCTCTGTTTGTGACAGAAAAAGATCTGGTCGTCCACGTAGTGTTCGTACGAAAAAGGTGGTCAAAGCAGTAAGGGAAAGAATTCAAAGAAATCCTGTCCGGAAGCAAAAGATTTTATCTCGGGAGATGAAGATAGCACCTAGAACCATGTCGCGTATTTTAAAAGATGACTTAGGACTTGCAGCCTATAAGAGACGTACTGGTCATTTCTTAACTGATAATTTAAAAGAGAATAGGGTGATAAAATCGAAACAACTACTGAAGCGGTACGCAAAGGGAGGTCATAGAAAAATTTTGTTTACGGATGACAAAATTTTTACAATTGAGCAACATTTTAACAAACAAAATGACCGTATTTATGCTCAAAGCTCTAAAGAAGCTTCCCAATTAGTCGACAGAGTGCAACGTGGGCACTATCCGACTTCAGTGATGGTTTGGTGGGGTGTTAGCTATGAAGGAGTGACCGGGCCATACTTTTGTGAAAAAGGTATCAAAACATTGGCACAAGTGTATCAAGGTACCATTCTTGAGAAGGTAGTGAAGCCCCTTAACAACACCATGTTCAATAATCAAGAATGGTCCTTCCAGCAAGACTCTGCGCCAGGTCGTAAAGCTCGGTCTACGCAGTCTTGGTTGGAAACGAAAGTTTTGGACTGCATCAGAGCTGAAGACTGGCCGTCGTCTAGTCCCGATCTTAATCCGCTGGATTATGATTTATGGTCAGCTTTAGAGAGCACGGCTTGCTCTAAGCGCCATGATAATTTGGAGTCCCTAAAACAATCCGTACGATTGGCAGTGAAAATTTTTCCCATGGAAAGAGTGCGTGCTTCTATTGATAACTGGCCTCAACGTTTAAAGGACTGTATTGCAGCCAATGGAGACCACTTCGAATAA

Protein

MEWGDKENRIAVIALHKVGMEPNAIFKTLHTLGISNMFVYRAINRCNETSSVCDRKRSGRPRSVRTKKVVKAVRERIQRNPVRKQKILSREMKIAPRTMSRILKDDLGLAAYKRRTGHFLTDNLKENRVIKSKQLLKRYAKGGHRKILFTDDKIFTIEQHFNKQNDRIYAQSSKEASQLVDRVQRGHYPTSVMVWWGVSYEGVTGPYFCEKGIKTLAQVYQGTILEKVVKPLNNTMFNNQEWSFQQDSAPGRKARSTQSWLETKVLDCIRAEDWPSSSPDLNPLDYDLWSALESTACSKRHDNLESLKQSVRLAVKIFPMERVRASIDNWPQRLKDCIAANGDHFE

Uniprot

P90693   G3G3K1   Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   + More
B9A8E5   A0A226D9B6   A0A0N4XXA5   A0A016WKB6   A0A1L5BY18   A0A1I7SJQ8   E3NDP6   A0A2G5T9N6   E3N1H1   E3NHD7   E3M1J2   E3MQK2   A0A016TV39   E3N4H8   W6NUW0   E3MXK7   A0A1I7T5D4   A0A016W3L5   A0A2G5TN79   E3NJL6   A0A2G5VIT1   A0A2G5SZY0   A0A2G5SF52   E3NHK7   A0A016VJ32   A0A1I8CC25   A0A1I7SRX5   A0A2H2I0K4   A0A016WN34   E3M897   E3N749   A0A368H7I1   A0A368FVD9   A0A016WY15   A0A2G5TSG2   A0A0N4Y502   A0A016S0M1   A0A016S9F8   A0A183G443   A0A3P8B6H1   A0A2G5TZM3   A0A183FUJ2   A0A3P8A0U6   A0A0C2GWR6   A0A1I7RU52   E3ND45   A0A2G5TZ20   A0A1I7XB99   H3E4E9   T1PDL9   A0A1I7XK10   G2J6Z9   A0A3P8S822   A0A3P8RL19   A0A0N4XTP7   B6IH59   H3ESY7   B6IIC1   E3N6E8   A0A3P8SXY7   H3EE07   A0A3P8RUJ2   H3DS69   E3N9D7   A0A2G5VPS7   A0A1I7WPN1   A0A2G5TC57   E3NPT4   A0A0K9NHE3   H3ETI8   A0A1I7XN71   H3FLR7   A8XR49   H3DZR2   A0A1I7Z1I3   H3FB13   H3FF09   B6IIQ6   A0A2H2JB66   H3EXA9   A0A2H2I3U9   B6IL81   A0A3P8TI71  

Pubmed

9014339    12653938    25730766    25527032    21909270    26829753    + More
23874975    18806794    14624247    26814964    26392177   

EMBL

U47917    AAB47739.1    JF779677    AEO90418.1    AF461149    AAN06610.1    + More
AB363028    BAG15927.1    AB363006    AB363010    AB363014    BAG15923.1    BAG15924.1    AB363018    BAG15926.1    AB473770    BAH20555.1    LNIX01000030    OXA41211.1    UYSL01019905    VDL71189.1    JARK01000255    EYC39473.1    KX931010    APL98300.1    DS268612    EFO94085.1    PDUG01000005    PIC23776.1    DS268508    EFO83264.1    DS268673    EFO98001.1    DS268421    EFO88618.1    DS268466    EFP06959.1    JARK01001411    EYC06502.1    DS268525    EFO85497.1    CAVP010059404    CDL95787.1    DS268492    EFP11689.1    JARK01001337    EYC34439.1    PIC28734.1    DS268747    EFP00909.1    PDUG01000001    PIC51673.1    PDUG01000006    PIC20538.1    PDUG01000012    PIC13506.1    DS268679    EFO98285.1    JARK01001345    EYC27589.1    JARK01000176    EYC41234.1    DS268428    EFO94379.1    DS268545    EFO88382.1    JOJR01000015    RCN51257.1    JOJR01000583    RCN36166.1    JARK01000059    EYC44525.1    PIC29926.1    UYSL01020440    VDL74616.1    JARK01001658    EYB84158.1    JARK01001601    EYB87313.1    UZAH01029309    VDP05368.1    PDUG01000004    PIC32571.1    UZAH01027257    VDO90094.1    KN728607    KIH63514.1    DS268606    EFO93488.1    PIC32570.1    KA646003    AFP60632.1    HE601047    HE600964    CAS00660.1    CAS01013.1    UYSL01019770    VDL69590.1    HE601507    CAR99239.1    HE601437    CAR99651.1    DS268539    EFO88027.1    DS268565    EFO90304.1    PIC53815.1    PIC24955.1    DS269417    EFO83229.1    LFYR01002220    KMZ56176.1    HE600955    CAP35122.1    HE600938    CAR99786.1    CAS00634.1   

Proteomes

UP000198287    UP000038043    UP000271162    UP000024635    UP000095284    UP000008281    + More
UP000230233    UP000025227    UP000095282    UP000095286    UP000005237    UP000252519    UP000050761    UP000095283    UP000005239    UP000008549    UP000265080    UP000036987    UP000095287   

PRIDE

P90693    Q8ITJ9    B1Q3L9    B1Q3L5    B1Q3L8   

Pfam

PF13358   DDE_3        + More
PF00292   PAX
PF00250   Forkhead
PF13936   HTH_38

Interpro

IPR009057   Homeobox-like_sf        + More
IPR036388   WH-like_DNA-bd_sf       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
IPR036906   ATPase_V1_fsu_sf       
IPR025246   IS30-like_HTH       
IPR000792   Tscrpt_reg_LuxR_C       

SUPFAM

SSF46689   SSF46689        + More
SSF46785   SSF46785       

Gene 3D

1.10.10.10     3.40.50.10580    

CDD

cd00059  FH

ProteinModelPortal

P90693   G3G3K1   Q8ITJ9   B1Q3L9   B1Q3L5   B1Q3L8   + More
B9A8E5   A0A226D9B6   A0A0N4XXA5   A0A016WKB6   A0A1L5BY18   A0A1I7SJQ8   E3NDP6   A0A2G5T9N6   E3N1H1   E3NHD7   E3M1J2   E3MQK2   A0A016TV39   E3N4H8   W6NUW0   E3MXK7   A0A1I7T5D4   A0A016W3L5   A0A2G5TN79   E3NJL6   A0A2G5VIT1   A0A2G5SZY0   A0A2G5SF52   E3NHK7   A0A016VJ32   A0A1I8CC25   A0A1I7SRX5   A0A2H2I0K4   A0A016WN34   E3M897   E3N749   A0A368H7I1   A0A368FVD9   A0A016WY15   A0A2G5TSG2   A0A0N4Y502   A0A016S0M1   A0A016S9F8   A0A183G443   A0A3P8B6H1   A0A2G5TZM3   A0A183FUJ2   A0A3P8A0U6   A0A0C2GWR6   A0A1I7RU52   E3ND45   A0A2G5TZ20   A0A1I7XB99   H3E4E9   T1PDL9   A0A1I7XK10   G2J6Z9   A0A3P8S822   A0A3P8RL19   A0A0N4XTP7   B6IH59   H3ESY7   B6IIC1   E3N6E8   A0A3P8SXY7   H3EE07   A0A3P8RUJ2   H3DS69   E3N9D7   A0A2G5VPS7   A0A1I7WPN1   A0A2G5TC57   E3NPT4   A0A0K9NHE3   H3ETI8   A0A1I7XN71   H3FLR7   A8XR49   H3DZR2   A0A1I7Z1I3   H3FB13   H3FF09   B6IIQ6   A0A2H2JB66   H3EXA9   A0A2H2I3U9   B6IL81   A0A3P8TI71  

PDB

5HOO     E-value=2.11268e-09,     Score=148

KEGG

NA   

GO

GO:0003677   GO:0016021   GO:0006355   GO:0003700   GO:0043565   GO:0005634   GO:0004519   GO:0034220   GO:0016020   GO:0007156   GO:0005886   GO:0007155   GO:0005737   GO:0016876   GO:0043039   GO:0004651  

Subcellular location

Nucleus  

Length:

346

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10277

Exp number, first 60 AAs:

0.09085

Total prob of N-in:

0.03697

outside

1  -  346

 

 

Pi

81.448024

Theta

83.008054

Tajima's D

-0.272533

CLR

0.002398

CSRT

0.297285135743213

Interpretation

Uncertain