Gene

KWMTBOMO02014  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002947

Annotation

PREDICTED:_exonuclease_mut-7_homolog_[Bombyx_mori]

Location

Bomo_Chr4(+):10215026-10217790      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.912

CDS

ATGGAAAAGGACAGTCCGATTCAATTAGCTTCAGCAAACCAATCAGTTAAAATAGTACCCTCGATTGAAGAGTCTCTGCAGTCTATGGGTCTAAACATTTCTTTAGATGAACGCAGTATACTTTGGTGGCAGCAGTTACAAACCACTTGGAAGACCTGGAAAAAGAGTGAAACTGTAGAACAACTCATTGAAACATACTTTCAATCAATACGAGATCCCTTCAGAGTGACACTGATATTTATAACGCAATGCATAACTCAAGACTGTAAACCCAAAACACTACCTTATTTTGTTGTAGAAACATTACAAAAGTGGTCAAAAAATCAGGAGCTATCACCTGAAGAATCTATAAAATCACCAGCTTTCTACATTGCAATTCAGCAAAGAAATCCAAGTTTTCTAAATCTTATTGCTCATACGTATCAACTCTCTACCATAAAGCAAGTCATTCTTCCAAAAATTAAAGAAATGATAAAAAATGACAATTGCAAACTTGCTTCACAAATTGTTATGGCATTGGATTTATATGAAGATATTCCAGTTGAAGATTTATTATTTCCATTGATATTACAAGACAAGAATAATATTATTGACGAGTATCTAACAACATGTCCAAGCCAAGTTAAACCTTTGTTATTTTTCCTGGATAATTTACTAAACAAGTCATTCAAATTGCGTGATTATATTCAAAGTTATTTAGAAAATAACCAAATAAGTCAAATTAGATATGAAAAATTACATCATAAACCACTTGGTAAGTTGGTTGCGAGACTTTGTAGTAAATTTAACATACCCATAGAGACATGTAAGAACCTAAGCAAAAATAGAACAGCTGGGGGACTTCGATACTTAATTCATCAAAAATACACAGAAAATAACATAAGTTCTACAGTGTGGGATGACTTGGTCAAAGATTCACTAAGGCAAAATGTAGAAGCAGCTAATGAATTCATTGAAATGTTGTCAAAATATGATAAGAATGAAGCCTTGAAATGGATTGACTACTTAAATATTGGAAACGAAGAATTACCCACTTCTTTAAAGGCTATTTCTCTAGAACATAACAATGACGAGTCACATGATATTGAAAATTGGGATACAGAGTCTAGTAAAATAATCCCTAGTCAAGAGTACTATAAATTTACTCTCACTAGAGACTGTATTATTATAATTGATAATGGTGAAAAGTTTTATGATATGTTGAACAGCATAAAGATGTACAATGTTGTTAGTATAGATTGTGAATGGAAACCATCATTTGGAGCAGTACAATCACAAGTGGCCTTAATCCAAATTGCTACTTTCCATAATGTTTACTTGATAGATACATTAATTTTAAACAAACAAGAATATTCCAGTTTTTGGTACACTTTCAATAAATCATTTATGGAAAACGGTGAGGTTATCAAACTAGGACTTGGGCTTGAACAGGATTTAAAAGAAATGAAAGCATCTATAAATGGTTTGGGAAAAATAAATGTCAAAGGTGAAGGATTATTAGATTTGTCATTGTTATGGAAAAATATTATCAATAATGGTCTTGTTATACCAGGATGCTGTGACAGTATAGGAAATGGCCTAAGTTCTATTGTGCAATCATGTTTTGGATTGCCCTTGGAGAAATCAGAGCAATGTTCAAATTGGGAATTACGACCCTTAAGGGAGACCCAAATAATATATGCTGCTCTAGATGCACATGTTCTACTACAAGTTTATGATTTTTTACAAAAAATGTGTGTTCAACAAAATATAAATTTTGAAGATATTGTAAATGAAACAATGCACGAAACAAAAAAAAAGCTTCCTAAGAAAACAAAGGTGATTGATAGGCTACAATTTAATTTGTGTTCTATTGAACCCAAATTTGTTAATGATGTTAAATTTCTTGTTGAGCCGACCTTATCACATTTAATGGCATACTTGAGATATTGTGGATTGGATACCATTGTAGTGCCTGGAAGCTTGCAGTGGCATGATGTTGTAAACTGGGCGATATCAGATGATCGTCTAGTTCTAGTAGATAAACTTAAATGTTCACCAACACAAGATTTTCCTCAGAACTCTATATTAAATGTTGGAAATGACACAATTGTAAAACAATTACAAAAAATATTTGAAAATTTCAATATTAAAATTAGACAAACTGATCTTTTAAGATTATGTGTGAAATGCAATAGTAATGACATCAAGAAACTAAGTTTGAATGAGATAAAAAAAATATGTGATGACTACATTAATTTAATTCCTAAAAGTACACTCGTTAACACATACTTGGCAGATTTTGATGATGAAGATGCAAGTTATGAGAATTTTCTTAGTGATTCAGATGGTGATGGTGACGTTTTACAGCCAGTTCAAAATAGTTATTGCCCAAACCCAAAAAGCTGTTTAACTAGTAAAGGGGCTGCAATCGAAATTTCCAATCCACAAGGCTTAGTCCAAAAAAATAAACCAGCAGTTCTGTGTGAATACTGTGGTCAAATGTATTGGGATGAAGATGACTTGTTTAAATCAATCAGTGATATAATTTGTCAAATCACAAATTTTACAGTCTGGTAG

Protein

MEKDSPIQLASANQSVKIVPSIEESLQSMGLNISLDERSILWWQQLQTTWKTWKKSETVEQLIETYFQSIRDPFRVTLIFITQCITQDCKPKTLPYFVVETLQKWSKNQELSPEESIKSPAFYIAIQQRNPSFLNLIAHTYQLSTIKQVILPKIKEMIKNDNCKLASQIVMALDLYEDIPVEDLLFPLILQDKNNIIDEYLTTCPSQVKPLLFFLDNLLNKSFKLRDYIQSYLENNQISQIRYEKLHHKPLGKLVARLCSKFNIPIETCKNLSKNRTAGGLRYLIHQKYTENNISSTVWDDLVKDSLRQNVEAANEFIEMLSKYDKNEALKWIDYLNIGNEELPTSLKAISLEHNNDESHDIENWDTESSKIIPSQEYYKFTLTRDCIIIIDNGEKFYDMLNSIKMYNVVSIDCEWKPSFGAVQSQVALIQIATFHNVYLIDTLILNKQEYSSFWYTFNKSFMENGEVIKLGLGLEQDLKEMKASINGLGKINVKGEGLLDLSLLWKNIINNGLVIPGCCDSIGNGLSSIVQSCFGLPLEKSEQCSNWELRPLRETQIIYAALDAHVLLQVYDFLQKMCVQQNINFEDIVNETMHETKKKLPKKTKVIDRLQFNLCSIEPKFVNDVKFLVEPTLSHLMAYLRYCGLDTIVVPGSLQWHDVVNWAISDDRLVLVDKLKCSPTQDFPQNSILNVGNDTIVKQLQKIFENFNIKIRQTDLLRLCVKCNSNDIKKLSLNEIKKICDDYINLIPKSTLVNTYLADFDDEDASYENFLSDSDGDGDVLQPVQNSYCPNPKSCLTSKGAAIEISNPQGLVQKNKPAVLCEYCGQMYWDEDDLFKSISDIICQITNFTVW

Uniprot

H9J0B1   A0A2H1VLG9   A0A194R7L6   A0A194PKC5   A0A212ERM4   A0A2J7Q9J5   + More
A0A2J7Q9I3   A0A067QUT2   A0A1Y1N8X7   A0A139WKV3   N6TXM7   A0A1Y1NA17   A0A154P984   A0A411G7M5   A0A1B6KKD8   A0A1B6KEA9   A0A1B6GJ01   A0A1B6HKP1   A0A1B6IFJ8   A0A1J1IV78   A0A224Z4S8   W8C4H4   V5HYW4   W8B720   A0A1Q3F787   A0A224XI93   A0A131YNS2   A0A1B0AT11   A0A1A9YGV6   A0A2C9JMJ3   A0A034VJT7   A0A2T7NMS5   A0A0K8U6J1   A0A0K8UL68   A0A1S3K4A3   A0A2R7W965   A0A0L0BUK4   A0A1A9UV26   A0A1B0G7H2   A0A402FBQ7   A0A1I8PT58   A0A1A9X004   T1J5A6   A0A0A1XQ98   A0A224Z6P3   A0A1A9ZLL9   A0A2G8KUU5   A0A3M7S2Q7   K1QMQ0   V4ALW2   A0A3B4BIU7   A0A093H878  

Pubmed

19121390    26354079    22118469    24845553    28004739    18362917    + More
19820115    23537049    28797301    24495485    25765539    26830274    15562597    25348373    26108605    25830018    29023486    30375419    22992520    23254933    25463417   

EMBL

BABH01010622    BABH01010623    ODYU01003220    SOQ41680.1    KQ460597    KPJ13823.1    + More
KQ459601    KPI93777.1    AGBW02012969    OWR44148.1    NEVH01016349    PNF25252.1    PNF25253.1    KK852985    KDR12833.1    GEZM01012247    GEZM01012244    JAV93065.1    KQ971327    KYB28445.1    APGK01050964    KB741180    KB631768    KI210422    ENN73121.1    ERL86002.1    ERL96255.1    GEZM01012248    GEZM01012243    JAV93066.1    KQ434846    KZC08402.1    MH366094    QBB01903.1    GEBQ01028082    GEBQ01017065    JAT11895.1    JAT22912.1    GEBQ01030175    GEBQ01013987    JAT09802.1    JAT25990.1    GECZ01007353    JAS62416.1    GECU01032551    JAS75155.1    GECU01022014    JAS85692.1    CVRI01000061    CRL04117.1    GFPF01010865    MAA22011.1    GAMC01009596    JAB96959.1    GANP01004620    JAB79848.1    GAMC01009595    JAB96960.1    GFDL01011623    JAV23422.1    GFTR01008124    JAW08302.1    GEDV01008349    JAP80208.1    JXJN01003090    GAKP01017149    GAKP01017148    JAC41803.1    PZQS01000011    PVD22456.1    GDHF01030060    GDHF01023037    GDHF01004042    JAI22254.1    JAI29277.1    JAI48272.1    GDHF01025204    JAI27110.1    KK854479    PTY16223.1    JRES01001303    KNC23755.1    CCAG010007663    BDOT01000182    GCF53899.1    JH431855    GBXI01001160    JAD13132.1    GFPF01010864    MAA22010.1    MRZV01000356    PIK51788.1    REGN01002157    RNA29877.1    JH816855    EKC30115.1    KB201611    ESO95750.1    KL205999    KFV77846.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000235965    UP000027135    + More
UP000007266    UP000019118    UP000030742    UP000076502    UP000183832    UP000092460    UP000092443    UP000076420    UP000245119    UP000085678    UP000037069    UP000078200    UP000092444    UP000288954    UP000095300    UP000091820    UP000092445    UP000230750    UP000276133    UP000005408    UP000030746    UP000261520    UP000053584   

PRIDE

H9J0B1   

Pfam

PF01612   DNA_pol_A_exo1        + More
PF01927   Mut7-C

Interpro

IPR002562   3'-5'_exonuclease_dom        + More
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR002782   Mut7-C_RNAse_dom       
IPR037432   Mut-7_DEDDy_dom       

SUPFAM

SSF53098   SSF53098       

Gene 3D

3.30.420.10    

CDD

cd06146  mut-7_like_exo

ProteinModelPortal

H9J0B1   A0A2H1VLG9   A0A194R7L6   A0A194PKC5   A0A212ERM4   A0A2J7Q9J5   + More
A0A2J7Q9I3   A0A067QUT2   A0A1Y1N8X7   A0A139WKV3   N6TXM7   A0A1Y1NA17   A0A154P984   A0A411G7M5   A0A1B6KKD8   A0A1B6KEA9   A0A1B6GJ01   A0A1B6HKP1   A0A1B6IFJ8   A0A1J1IV78   A0A224Z4S8   W8C4H4   V5HYW4   W8B720   A0A1Q3F787   A0A224XI93   A0A131YNS2   A0A1B0AT11   A0A1A9YGV6   A0A2C9JMJ3   A0A034VJT7   A0A2T7NMS5   A0A0K8U6J1   A0A0K8UL68   A0A1S3K4A3   A0A2R7W965   A0A0L0BUK4   A0A1A9UV26   A0A1B0G7H2   A0A402FBQ7   A0A1I8PT58   A0A1A9X004   T1J5A6   A0A0A1XQ98   A0A224Z6P3   A0A1A9ZLL9   A0A2G8KUU5   A0A3M7S2Q7   K1QMQ0   V4ALW2   A0A3B4BIU7   A0A093H878  

PDB

6K1E     E-value=1.46121e-06,     Score=128

KEGG

101735434    no KO assigned | (RefSeq) exonuclease mut-7 homolog

GO

GO:0003676   GO:0008408   GO:0004527   GO:0006139   GO:0006412   GO:0005634   GO:0005737   GO:0016876   GO:0043039   GO:0004651  

Length:

852

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00393

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00014

outside

1  -  852

 

 

Pi

262.105728

Theta

189.981584

Tajima's D

1.201828

CLR

0.09971

CSRT

0.712364381780911

Interpretation

Uncertain