SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02010  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013570
Annotation
Uncharacterized_protein_OBRU01_11172_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 2.169
 

Sequence

CDS
ATGCTTAAACGCTTTTGTGTGTTGTTTATAGCGCTTGCTGTATTTGGTGAATGTTCAGTAACAACCTTCCCAAAGACTCATACACAACCAGAATGGGAAGCCCACGTGAAAGACTTTATAAAATTGATCGACGTTCAGAAATTAATGAGTATTGCGGTTAACTACATTTCCGATCCAGAAGTTATGAACTTCGTCGAGTTCCTGTTAAGTCCGGAATTCAAGAAAATAATTTGGGAAATAGAAATCATGCCAGAGTTCAGAGAAGCTTATGGATATTTGAAAGTCAAGGGCTATGATTTTGGATTCGCGTTCGACTTTATTAATAACGCTTTAAATATGCCGCCGTTTGAACCAAAAACACCATTGAGGAATAAAAAAGGAATATCTGGAGTGTTTGAAGAAATGATGGCTGCGTTGCCCTTTGAAGAAATGAAAAAACTTTTCGAAGATAAACTAGAGACGAGTACCGAAATTTCCGAACTCTTCAAGATTATCAATTCTGAAGAATATTTGTCAATTATAAAGAGGATGTCCGCTAATCAAGAGTTTATTGAAATTAAGAATATTTTAACATTATACGGATTTAAATTTGATTATATATGTTCGTTTGCTAAGGGTATCTTCGGCGAATATTATCAGGGTATCTTTTGTGCTTAA
Protein
MLKRFCVLFIALAVFGECSVTTFPKTHTQPEWEAHVKDFIKLIDVQKLMSIAVNYISDPEVMNFVEFLLSPEFKKIIWEIEIMPEFREAYGYLKVKGYDFGFAFDFINNALNMPPFEPKTPLRNKKGISGVFEEMMAALPFEEMKKLFEDKLETSTEISELFKIINSEEYLSIIKRMSANQEFIEIKNILTLYGFKFDYICSFAKGIFGEYYQGIFCA

Summary

EMBL
BABH01039015    JTDY01001668    KOB73202.1    AGBW02012969    OWR44144.1    KY661332    + More
AVA17419.1    U78970    AAC34312.1    AF072222    AAD13533.1    U69261    AAC34737.1    U69957    AAB82404.1    GU301883    ADB92492.1    KK853323    KDR08524.1    PYGN01000332    PSN48368.1    AF072220    AAD13531.1    EF202179    ABP04045.1    AF072221    AAD13532.1    AF072219    AAD13530.2    PYGN01000874    PSN39804.1    GBYB01000663    JAG70430.1    NEVH01006723    PNF37061.1    PNF37062.1    DS232267    EDS38794.1    EZ933295    ADJ57676.1    KQ434783    KZC04901.1    GL437123    EFN71014.1    AJWK01028468    EU124571    ABV60289.1    KQ414633    KOC67099.1    KQ435729    KOX77672.1    KK107077    QOIP01000001    EZA60607.1    RLU26326.1    RLU26700.1    KOC67096.1    EDS38791.1    GL888486    EGI60214.1    EDS38790.1    DS231908    EDS45562.1    PYGN01003836    PSN29414.1    KZ288364    PBC26914.1    KQ977279    KYN04372.1    KOX77673.1    GL768066    EFZ12622.1    PYGN01000306    PSN48846.1    KQ982182    KYQ59195.1    GL447038    EFN86980.1    KQ981791    KYN35782.1    PBC26913.1    KQ979440    KYN21516.1    CH477978    CH477559    EAT34668.1    EAT38996.1    GEHC01000476    JAV47169.1    PBC26912.1    ADTU01014245    KQ976464    KYM84538.1    KOC67090.1    KOC67092.1    EZA60591.1    GANO01000999    JAB58872.1    AY050565    CH478060    CH477662    AAL05408.1    EAT34153.1    EAT34155.1    EAT37592.1    EAT34154.1    AXCN02001866    AY009156    AAG35193.1    EAT38997.1    GFDF01005162    JAV08922.1    EAT34669.1    KOC67094.1    ATLV01020699    KE525305    KFB45603.1    GFDF01005188    JAV08896.1    GFDF01005189    JAV08895.1    AY038041    AAK72505.2    EAT37594.1    RLU27030.1    EAT34666.1    MK075200    AYV99603.1    LBMM01005495    KMQ91470.1    EAT37595.1    GFDF01005164    JAV08920.1    RSAL01000319    RVE42568.1    EAT38998.1    EZ933291    ADJ57672.1    GFDF01005163    JAV08921.1    AY009155    AAG35192.1    JXUM01006083    KQ560208    KXJ83828.1    JXUM01044727    KQ561411    KXJ78663.1    GAMD01000177    JAB01414.1    CH477705    EAT37044.1    GAPW01004424    JAC09174.1    CH477222    EAT47242.1    EU031911    ABV44704.1    EFZ12575.1    EU124577    ABV60295.1   
Pfam
PF06757   Ins_allergen_rp
Interpro
IPR010629   Ins_allergen       
PDB
4JRB     E-value=1.17888e-19,     Score=234

Ontologies

GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.989705
 
 
Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.66043
Exp number, first 60 AAs:
1.60338
Total prob of N-in:
0.10509
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
78.128955
Theta
85.400068
Tajima's D
-0.221115
CLR
4.902734
CSRT
0.314084295785211
Interpretation
Uncertain
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