SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02009
Pre Gene Modal
BGIBMGA013568
Annotation
osiris_21_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.264 Mitochondrial   Reliability : 1.034
 

Sequence

CDS
ATGGATGCCGAGGATTACTCAGAGAACGAAATAGATAGTGGCAGAGCTGGGGAGAGCTCCTGGTGGCCGTCAGCCGAATTTGCCGTCTTACAGAAAGTTTATGATGACTGTAGCTCTCAGAAACATATGTCACTGTGTCTCAAGGGCAAAGCTTTGATTGCATTATCACGAGCGGTGGAGCAGGAGAGCATTCAGATCACTGATGGGTTATCGTTAGTGAAGGAGGGCGACGCTCCCTCAGCAGTAGCAGAGCCACGTTTCTTTCCAGGAATGACGAAAGAGGAGAAAATCGACTCTATGCTGCGCACTAAATTCGAGCAGTTAATGAACACTCATACAGTTTCTCTTGATCTTGCTACGGAAGGCAGAGGTAGAGGTAAAAAGGTCCTGCCTTATTTGCTCCTCGGTATCTTTTCTACCATGAGCATATTCGGAGGCATGGCATTGAAGACCCTAGCCGCTATCGCAGGCAAAGCCCTTATCGCCAGTAAAGTGGCTTTGACAATTGCAGGCATTATTGCCCTCAAGAAATTGTTCAGTCATGAGACGCCCACTGAAACGACGTTCCAAGTTCACGCAGACGGACACCATAGGCGGAATCTGTATGTGGTGAGACCAGTGAGCCCAAGTGCGGTGGACCCTTATCATTATGCTAAACCGACACTCGCTAAAGCTTAG
Protein
MDAEDYSENEIDSGRAGESSWWPSAEFAVLQKVYDDCSSQKHMSLCLKGKALIALSRAVEQESIQITDGLSLVKEGDAPSAVAEPRFFPGMTKEEKIDSMLRTKFEQLMNTHTVSLDLATEGRGRGKKVLPYLLLGIFSTMSIFGGMALKTLAAIAGKALIASKVALTIAGIIALKKLFSHETPTETTFQVHADGHHRRNLYVVRPVSPSAVDPYHYAKPTLAKA

Summary

EMBL
FJ176294    ACI23616.1    JTDY01000032    KOB79290.1    RSAL01000319    RVE42567.1    + More
ODYU01012043    SOQ58138.1    KQ460207    KPJ16632.1    KQ459601    KPI93781.1    AGBW02012969    OWR44143.1    NWSH01000331    PCG77343.1    UFQT01000773    SSX27118.1    CH478500    EAT32888.1    ADMH02002140    ETN58320.1    AXCM01002782    AXCN02000924    AAAB01008960    EAA11788.4    APCN01000106    CVRI01000055    CRL01248.1    AE014134    AAF53094.1    AJVK01016434    CM000157    EDW88068.1    DS231892    EDS44082.1    CH954177    EDV58901.1    DS232610    EDS44005.1    CH480818    EDW52584.1    CH933807    EDW13311.1    CM000361    CM002910    EDX04690.1    KMY89750.1    ATLV01022594    KE525334    KFB47827.1    JXUM01017677    KQ560490    KXJ82139.1    DS231937    EDS27815.1    CP012523    ALC39313.1    CH379060    EAL33870.1    CH479180    EDW29143.1    ADMH02000103    ETN67815.1    CH940649    EDW63407.1    OUUW01000004    SPP79508.1    CH477315    EAT43791.1    GDHF01019284    JAI33030.1    AXCM01000100    GAKP01000216    JAC58736.1    AAAB01008849    EAU77178.2    APCN01005115    CH916372    EDV98820.1    AXCN02002279    CH964182    EDW80249.1    CH902620    EDV30973.1    JRES01000668    KNC29416.1    CCAG010013204    JXJN01006757    GAMC01000215    JAC06341.1    GDHF01025048    JAI27266.1    GBXI01004642    JAD09650.1    CAQQ02019021    DS235812    EEB17434.1    KK854089    PTY11054.1    JXUM01054123    KQ561806    KXJ77475.1    CVRI01000003    CRK87120.1    PYGN01000289    PSN49205.1    DS231991    EDS30690.1    ATLV01014432    KE524972    KFB38742.1    CH477298    EAT44319.1    AXCN02001159   
Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676       

Ontologies

Topology

Length:
225
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
39.57591
Exp number, first 60 AAs:
0.00053
Total prob of N-in:
0.95188
inside
1  -  128
TMhelix
129  -  148
outside
149  -  152
TMhelix
153  -  175
inside
176  -  225
 
 

Population Genetic Test Statistics

Pi
288.970063
Theta
214.600115
Tajima's D
1.064086
CLR
0.067135
CSRT
0.674916254187291
Interpretation
Uncertain
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