Gene

KWMTBOMO02008

Annotation

PREDICTED:_chromatin_complexes_subunit_BAP18-like_[Amyelois_transitella]

Location

Bomo_Chr4(+):9830723-9832840      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.645 Nuclear   Reliability : 1.873

CDS

ATGAATAATTCCGCTGCTAAGGTTGGCGAAATTTTCACTGAAGCTGGCGCCGCTTTTAACAAATTGGCAGAAATGATAATGCTTCTTCATCCAATAGCTGAAACTACACCAAGTGTGCAGGCGAAAACCCCAGTAAAGCGAAAGGCTACAGATGAAAAATATGCACCAAGCACATCGGGTCAACACACCGTCCACACATCTATTTCACAACAAGTTACTCTCAATATGCTGAATGCTCCTGAACCAGAAATGGAAGTTGAAAGCCTGGGTGGTGATGTCAAGTTAGAGTTTGAGCCGAGCACAGAGGAAATTGTCACTTAA

Protein

MNNSAAKVGEIFTEAGAAFNKLAEMIMLLHPIAETTPSVQAKTPVKRKATDEKYAPSTSGQHTVHTSISQQVTLNMLNAPEPEMEVESLGGDVKLEFEPSTEEIVT

Uniprot

S4PGC5   A0A212FBD2   A0A2H1WYP7   A0A2A4K0Y9   A0A2P8XHR3   A0A1E1WR14   + More
A0A1B6GZV9   A0A1B6HNY7   A0A1E1WI23   A0A2A4K624   A0A2H1V4Z7   A0A1B6KIE9   A0A1Y1M2J2   A0A139WJH5   A0A2W1BBM0   A0A1B6C5Y2   A0A1B6LWI8   A0A067RE85   A0A1B6FVJ2   A0A1B6IV30   T1J454   A0A0P4VQK0   R4FKA4   A0A1B6LPY4   A0A1B6M3F6   J3JVA0   A0A088ATF8   A0A0T6BH31   A0A1B6KH57   A0A2A3EGP9   D2A128   A0A1B6LEA9   A0A087TMM5   A0A1L8DWI0   A0A232EMM7   K7INF2   A0A171ARI5   A0A0V0G9M1   A0A069DW54   A0A293MY83   A0A0P4WIG7   A0A0N0BGR2   A0A1B6KRA2   A0A1B6GQF4   A0A0A9WSB7   Q175P0   A0A1S4FEA1   A0A194RKX9   A0A310SDK7   A0A0L7RJL7   A0A1S3DJI0   A0A3B4XEC8   A0A3B4TNP1   A0A1S3KFG9   A0A0A9WZP5  

Pubmed

23622113    22118469    29403074    28004739    18362917    19820115    + More
28756777    24845553    27129103    22516182    23537049    28648823    20075255    26334808    25401762    26823975    17510324    26354079   

EMBL

GAIX01006240    JAA86320.1    AGBW02009346    OWR51051.1    ODYU01012043    SOQ58137.1    + More
NWSH01000331    PCG77340.1    PYGN01002090    PSN31535.1    GDQN01001604    JAT89450.1    GECZ01001800    JAS67969.1    GECU01031345    JAS76361.1    GDQN01004487    JAT86567.1    NWSH01000142    PCG79122.1    ODYU01000701    SOQ35911.1    GEBQ01028745    JAT11232.1    GEZM01044872    JAV78076.1    KQ971338    KYB28109.1    KZ150355    PZC71234.1    GEDC01028386    JAS08912.1    GEBQ01011963    JAT28014.1    KK852691    KDR18358.1    GECZ01015716    JAS54053.1    GECU01016907    JAS90799.1    JH431837    GDKW01001869    JAI54726.1    ACPB03022918    GAHY01001943    JAA75567.1    GEBQ01014212    JAT25765.1    GEBQ01009511    JAT30466.1    APGK01037630    BT127167    KB740948    KB632364    AEE62129.1    ENN77392.1    ERL93604.1    LJIG01000300    KRT86640.1    GEBQ01029483    JAT10494.1    KZ288253    PBC30963.1    EFA02597.1    GEBQ01017968    JAT22009.1    KK115914    KFM66364.1    GFDF01003310    JAV10774.1    NNAY01003330    OXU19610.1    GEMB01000745    JAS02393.1    GECL01001324    JAP04800.1    GBGD01003335    JAC85554.1    GFWV01019572    MAA44300.1    GDRN01045239    JAI66877.1    KQ435771    KOX75154.1    GEBQ01025988    JAT13989.1    GECZ01005186    JAS64583.1    GBHO01033283    GDHC01014218    JAG10321.1    JAQ04411.1    CH477398    EAT41763.1    KQ460207    KPJ16631.1    KQ797156    OAD46997.1    KQ414578    KOC71152.1    GBHO01033284    JAG10320.1   

Proteomes

UP000007151    UP000218220    UP000245037    UP000007266    UP000027135    UP000015103    + More
UP000019118    UP000030742    UP000005203    UP000242457    UP000054359    UP000215335    UP000002358    UP000053105    UP000008820    UP000053240    UP000053825    UP000079169    UP000261360    UP000261420    UP000085678   

Pfam

PF00249   Myb_DNA-binding

Interpro

IPR037931   BAP18        + More
IPR009057   Homeobox-like_sf       
IPR001005   SANT/Myb       
IPR017884   SANT_dom       

SUPFAM

SSF46689   SSF46689       

CDD

cd00167  SANT

ProteinModelPortal

S4PGC5   A0A212FBD2   A0A2H1WYP7   A0A2A4K0Y9   A0A2P8XHR3   A0A1E1WR14   + More
A0A1B6GZV9   A0A1B6HNY7   A0A1E1WI23   A0A2A4K624   A0A2H1V4Z7   A0A1B6KIE9   A0A1Y1M2J2   A0A139WJH5   A0A2W1BBM0   A0A1B6C5Y2   A0A1B6LWI8   A0A067RE85   A0A1B6FVJ2   A0A1B6IV30   T1J454   A0A0P4VQK0   R4FKA4   A0A1B6LPY4   A0A1B6M3F6   J3JVA0   A0A088ATF8   A0A0T6BH31   A0A1B6KH57   A0A2A3EGP9   D2A128   A0A1B6LEA9   A0A087TMM5   A0A1L8DWI0   A0A232EMM7   K7INF2   A0A171ARI5   A0A0V0G9M1   A0A069DW54   A0A293MY83   A0A0P4WIG7   A0A0N0BGR2   A0A1B6KRA2   A0A1B6GQF4   A0A0A9WSB7   Q175P0   A0A1S4FEA1   A0A194RKX9   A0A310SDK7   A0A0L7RJL7   A0A1S3DJI0   A0A3B4XEC8   A0A3B4TNP1   A0A1S3KFG9   A0A0A9WZP5  

KEGG

101743114    K23406 chromatin complexes subunit BAP18 | (RefSeq) uncharacterized LOC101743114

GO

GO:0016589   GO:0071339   GO:0003677  

PANTHER

PTHR21397:SF2  

Subcellular location

Nucleus  

Length:

106

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04932

Exp number, first 60 AAs:

0.04932

Total prob of N-in:

0.35695

outside

1  -  106

 

 

Pi

251.639645

Theta

196.122734

Tajima's D

0.877165

CLR

0.003457

CSRT

0.626868656567172

Interpretation

Uncertain