Silkworm Genome Informatics Database

Gene

KWMTBOMO01996 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013563

Annotation

PREDICTED:_tensin_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr4(+):9624323-9638762 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.913

CDS

ATGGACTCGGGCATTTCGTCGGCGGGGCGGCGTGCGGCGCCCAGCCCACCCGACGAGCTGGACGCGCTGCTCGGCGACATGCTGCGCACGGTGAGCGCGCTGCCGGACCTACCGCACTCGCACTCCGACCGCCCGACCGACATACCGTACCACGCGCGCGCAGACTCCGCGCCCTTCACCTACGGAGCGCCCGGCCTTCGTCCTGGCATGCTGCGTGCCTCCAACCGTCTCGCCAGCCCCGACCTGGTGAGGCGAGCCCTAGGATCTGATACTAATTATCAGCCCATCGAGGATGATGACGACGAACGTACCGTCACTCCGGAGCCATCGCCGAGAGCTCCTCTGTCTCCGCTGACGCTTCGAAAGTTCACGCACGAGGATGTCATCACTACTACAACCACCGCGACCTTACCGCCGCCCTCCTCTCCCGCTCGGAACGGCAGATGGTTGAACGGTGAGGCGGAGTGGACAGAACGAACGCCAGCTAACGCAAGAAAAGCTATACCGGAAAATGGAACGCGGCGTTCGAACAGTACTATTGGATGGCACGAGAGTACACGAGCTCGGGAGCCGCGCAGATCCGAAGGAAGCGTAGAACCGAACTCCGGACTCACGTGGCTACAACGACAACAGCAAAGGCTTCGAGAAAAGAAAGAGGCAAGGGAAAGAGTCGCTCGACTACCGCTCGAGTGGGATACTGCGACTTCCCGGCATGTGCGGCGATCAGCTAGTCATCGGGTCGATGGATACACGAGCGACACGACGGCCTTCGCTGACGACGATGACGACTTCAGTGTTCCCTTACACGTGAATACGCGCACACCTCACAGAACGGACAGCATCAGCCCACAGGCTCCCGACAGGACCTCATCTAGAAAGTTCATGTATGAAAAGATGACAATGCGCGAATGGAGTTCTTCCACAACACCGACGAACACCACCGCGCCCGGTCTATTGTCACTTGCGGAGCACTCTAATACCGATACTATTGAGCGCAGAGAGAGCAGTTCCCGCGCCGGCACCCCCGCGTTCCCGACACACCCGCGCACCCCCTACCCGCCCACGCCTACGCCTTCACTGAGCGCGCGACCACCACGCTCGCCCACTGTCGCCAGGAAAGAGCGGGAAGGCAGTCCGGAGTCCGAATACCGCACGTACAACGGCAGCGTGGGGTCGCACTCGCGCCGCTCCAGCGTGAGCGAGCCGCACCACGTGGCGCCGGACCGCGTGCGGTTCGCGAGGGACACCAGCCACTACTGGTACAAACCCAACATCTCCAGGGACGATGCGGTGGCAGCGCTCCAGCAGCTAGAGGAGGGTTCTTTCATCGTGCGGGACTCGAACTCGTTCCCGGGCGCGTTTGGAGTGGCGGTGCGCGCGGGGGGCGGCGTGCGTCACTTCCTAGTGGAGACGGCTCCGCGCGGGGTGCGCCTGCGCGGATCGCCCGACGAGCCAGTCTTCAGCTCGCTCTCGGCACTCGTGTACCAGCACTCTGTCACACCGCTCGCGCTGCCCGTGCCACTGCGCTTGCCCGATAGGGATCCATGGTCAGACGGCACCCCCAACGCGGCAGCACGCGCCCTACTGGCGACCGGCGCCGCGTGCCACGTGCTGCTACTAGGCTCCGAGAACACAGAGGCTCTAACGGGACCGGCGGCCGTCAAGAGAGCCGTCGGAAATGTACTGCAGAGGAAGAGCGCAGGTCACGTGGTCCACTTGAAGGTGTTCGGCGGCGGCATCACGCTTACGGACTCGGCGCGCAAACTGTTCTTCCGGCGCCACTACCCCGCCGCCGCCGTCTCGTATGCAGGACTCGATCCCGACGAGCGCCGGTACACACACGTAGACAACGCTACGCAAACCGAAAAACGGATATTCGCATTCGTCGCTCGGTCCGCATCAGGGCAAGACAACCAGTGCCACGTGTTCGCCGAACTCGAACCTGAGCAGCCGGCTACTGCCATCGTCAACTTTGTTAACAAGGCTCTGCTGGGAAATGTTCAGAAGAGGGACATTCTATAA

Protein

MDSGISSAGRRAAPSPPDELDALLGDMLRTVSALPDLPHSHSDRPTDIPYHARADSAPFTYGAPGLRPGMLRASNRLASPDLVRRALGSDTNYQPIEDDDDERTVTPEPSPRAPLSPLTLRKFTHEDVITTTTTATLPPPSSPARNGRWLNGEAEWTERTPANARKAIPENGTRRSNSTIGWHESTRAREPRRSEGSVEPNSGLTWLQRQQQRLREKKEARERVARLPLEWDTATSRHVRRSASHRVDGYTSDTTAFADDDDDFSVPLHVNTRTPHRTDSISPQAPDRTSSRKFMYEKMTMREWSSSTTPTNTTAPGLLSLAEHSNTDTIERRESSSRAGTPAFPTHPRTPYPPTPTPSLSARPPRSPTVARKEREGSPESEYRTYNGSVGSHSRRSSVSEPHHVAPDRVRFARDTSHYWYKPNISRDDAVAALQQLEEGSFIVRDSNSFPGAFGVAVRAGGGVRHFLVETAPRGVRLRGSPDEPVFSSLSALVYQHSVTPLALPVPLRLPDRDPWSDGTPNAAARALLATGAACHVLLLGSENTEALTGPAAVKRAVGNVLQRKSAGHVVHLKVFGGGITLTDSARKLFFRRHYPAAAVSYAGLDPDERRYTHVDNATQTEKRIFAFVARSASGQDNQCHVFAELEPEQPATAIVNFVNKALLGNVQKRDIL

Uniprot

H9JVK0 A0A212ET20 A0A2A4JZB6 A0A2A4K097 A0A2A4JZW5 A0A2A4K100 + More
A0A2H1VV32 A0A2A4JZB2 A0A194PM31 A0A194RBA5 A0A0L7LST3

Pubmed

19121390 22118469 26354079 26227816

EMBL

BABH01038982 AGBW02012699 OWR44594.1 NWSH01000331 PCG77347.1 PCG77348.1 + More
PCG77349.1 PCG77350.1 ODYU01004333 SOQ44084.1 PCG77351.1 KQ459601 KPI93794.1 KQ460398 KPJ15108.1 JTDY01000158 KOB78533.1

Proteomes

UP000005204 UP000007151 UP000218220 UP000053268 UP000053240 UP000037510 + More

PRIDE

H9JVK0

Pfam

PF08416   PTB        + More
PF00017   SH2
PF10409   PTEN_C2

Interpro

IPR006020   PTB/PI_dom        + More
IPR033929   Tensin_PTB
IPR011993   PH-like_dom_sf
IPR013625   PTB
IPR036860   SH2_dom_sf
IPR000980   SH2
IPR029021   Prot-tyrosine_phosphatase-like
IPR014020   Tensin_C2-dom
IPR029023   Tensin_phosphatase

SUPFAM

SSF55550 SSF55550 + More
SSF52799 SSF52799

Gene 3D

2.30.29.30 3.30.505.10 3.90.190.10

CDD

cd01213 PTB_tensin

ProteinModelPortal

H9JVK0 A0A212ET20 A0A2A4JZB6 A0A2A4K097 A0A2A4JZW5 A0A2A4K100 + More
A0A2H1VV32 A0A2A4JZB2 A0A194PM31 A0A194RBA5 A0A0L7LST3

PDB

2GJY E-value=7.00711e-31, Score=337

KEGG

101741810 K18080 tensin | (RefSeq) tensin-2

GO

GO:0005515 GO:0004743 GO:0006096 GO:0030955 GO:0003824 GO:0005737 GO:0016876 GO:0043039 GO:0004651 GO:0005634

Length:

673

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01158

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00023

outside

1 - 673

Pi

227.558938

Theta

167.158551

Tajima's D

1.167053

CLR

0

CSRT

0.704514774261287

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics