Gene

KWMTBOMO01988

Annotation

buffy_[Bombyx_mori]

Location

Bomo_Chr4(+):9345716-9394055      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.725 Nuclear   Reliability : 1.385

CDS

ATGCGTCGAAAGCTCAGCACTCCGCTTACCTCGCTAACCAGCGTTTCCGATGAATTGCCTGGCTTGAAAATTTCACCAAGTCGATCTCTTTCGCCGCTTGACCGCACCAAGCGACGGTTCAGCACAATGGTGACGAGCGCAGCCGCTGCAGCTGTGACTCGCCGCCTGTCCGCAACTATAGGATGGTACCTTGCCAGTCATACACAAGTCAAACCGCAGATCGTACGCCAAGGGCGTGCACTTTGCCTGCAATATATTAAAACACAGATACGAAGATCAACTACCTGTGTCAAAAAGCAGATAGTTATGAAGCGCCTTCAGCGTATGATCGAGACTGAGTGTGGAGAAGAGGCTACTTGTAATAGTGACACCGGGGTACTTTCTGCACTCCGCGCGCTATGTGCGGCGTTGGAGAGAAAGCGGCCGGAAGCATTCCGTCATGTCGCGCGGCAAGCGACCAGGGCTCCTTCAGCTATGCTACGCTCAGACACTGCACTTGCAGAACTTGCACTTGCACTCGCAAGACGGGTCACAAGGGAGAACATCACGTGGTCAAAGATTGCCGCTGTATATTGTATTTGCGGAGCACTGGCTAGGGAAGCTGCTGAGGCAGCAGAAGGAGAGCCATCATTAGAGCTAATCACAGCACCGGCTGCTGCAATTGCTGACGTCTTACACGAGGAGCCTGGATCATGGATCGCCTCTCATGGAGGATGGAATGGACTAATAGATCGTCTGCGCGCCAGCGAACGTGATCATACATCGGAGAAGAATTTACGTTTTATGATTGGATTCTTCGTGATGACCTTCTTGACACTGCTGCTGTTTCGATGGCTTTTACATACTAACCCAAGTTACGGCGACTCATATATAGTCTAA

Protein

MRRKLSTPLTSLTSVSDELPGLKISPSRSLSPLDRTKRRFSTMVTSAAAAAVTRRLSATIGWYLASHTQVKPQIVRQGRALCLQYIKTQIRRSTTCVKKQIVMKRLQRMIETECGEEATCNSDTGVLSALRALCAALERKRPEAFRHVARQATRAPSAMLRSDTALAELALALARRVTRENITWSKIAAVYCICGALAREAAEAAEGEPSLELITAPAAAIADVLHEEPGSWIASHGGWNGLIDRLRASERDHTSEKNLRFMIGFFVMTFLTLLLFRWLLHTNPSYGDSYIV

Uniprot

E9JEG2   A0A2A4JK15   A0A212F7C9   A0A1E1WNP7   A0A0A0PCY5   A0A194PLD1   + More
A0A194RCX2   A0A1L1YPM4   C1BRB5   A0A336LUP5   A0A1W4VCD0   A0A1B6IFX8   B3NSD8   B4HNS3   B4P621   A0A0J9TZ51   Q8T8Y5  

Pubmed

21040523    22118469    26354079    17994087    17550304    22936249    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

GQ426279    ADM32505.1    NWSH01001210    PCG72116.1    AGBW02009885    OWR49645.1    + More
GDQN01008860    GDQN01002430    JAT82194.1    JAT88624.1    KF836091    AHG99280.1    KQ459601    KPI93803.1    KQ460398    KPJ15120.1    KP271439    AKQ06238.1    BT077144    ACO11568.1    UFQS01000006    UFQT01000006    SSW96991.1    SSX17378.1    GECU01021882    JAS85824.1    CH954179    EDV56440.1    CH480816    EDW47438.1    CM000158    EDW90896.2    KRJ99503.1    CM002911    KMY93025.1    KMY93026.1    AE013599    AY075219    AAF58628.3    AAL68086.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000192221    UP000008711    + More
UP000001292    UP000002282    UP000000803   

PRIDE

E9JEG2    Q8T8Y5   

Pfam

PF00452   Bcl-2

Interpro

IPR002475   Bcl2-like        + More
IPR020726   Bcl2_BH2_motif_CS       
IPR026309   BOK       
IPR036834   Blc2-like_sf       
IPR026298   Blc2_fam       

SUPFAM

SSF56854   SSF56854       

Gene 3D

1.10.437.10    

ProteinModelPortal

E9JEG2   A0A2A4JK15   A0A212F7C9   A0A1E1WNP7   A0A0A0PCY5   A0A194PLD1   + More
A0A194RCX2   A0A1L1YPM4   C1BRB5   A0A336LUP5   A0A1W4VCD0   A0A1B6IFX8   B3NSD8   B4HNS3   B4P621   A0A0J9TZ51   Q8T8Y5  

KEGG

100533206    K20017 Bcl-2 family protein | (RefSeq) buffy

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)
04215    Apoptosis - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0042981   GO:0016021   GO:0016239   GO:0043068   GO:0043066   GO:0005783   GO:0009267   GO:0035234   GO:0006915   GO:0012501   GO:0007186   GO:0004983   GO:0008168   GO:0005737   GO:0016876   GO:0043039   GO:0004651   GO:0005634  

PANTHER

PTHR11256   PTHR11256:SF48  

Length:

292

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.28481

Exp number, first 60 AAs:

0.18733

Total prob of N-in:

0.88191

inside

1  -  260

TMhelix

261  -  280

outside

281  -  292

 

 

Pi

241.602587

Theta

178.61971

Tajima's D

0.907906

CLR

0.533677

CSRT

0.634718264086796

Interpretation

Uncertain