Silkworm Genome Informatics Database

Gene

KWMTBOMO01984 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005905

Annotation

PREDICTED:_uncharacterized_protein_LOC106127619_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr4(-):9117962-9123845 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.444

CDS

ATGCCCTACATTTTGATTAGAGGTAATTTGGCCTCTTACGGACACAAAAATCCTTGGCGCGTGTTAGTGTCTGGCTTGAAAGCGGAAGATATAGAAGAACTCAAGAGATTTGCGTGCGGAGGTTACTGTGACAATTCCACAATAGTCTACTTACAACATCCCTGCGTTATACTGAGTGCTTTAGAAGTTTTGGGTTACAAAGTAGTTGCTTCTAGTTCAACAGCAGTTAAACAAGATTATAATGAGTATATGTGGACAATGAGAAAAGAGTTTTCTGAACCAGAACCTTCAATTATTGTTGAGCAAGACAACATCACCAATTTTAGTAAAGAAGCAATGCACTTGAGCAACTACCACTCAAATAAAGACGACGAAAATGTTTTGAGCAACTTGTTAAATGCACCAATTGCACCAATAACTGAAGATGGTGTTGTTTACATTGCAATAAAAGGTTCTTTACATGCAAATGACAGTTCTGTATTTGGACTAGGTGAAGAAGAAATAAAAGCTCTTACAAAAAAGTACCCAGGATCCGGAGTAGTTGTTAATGGTGTCTCCATTAAAGCTAATGTACTTGATGCTATAAACTCTTTAGCTCAACTTGGTACTAATTCCTCAGTATGTCAAACATTGACAGAAATGGATTGGGAGAGGGGCTTGTGGTATGCAGCATTTCATGGGGACAAAGACAGAGTTCAGTATTTGATTGACAAAGCAAACAATGCCAAAGAAATAGTCAATGCTCCTGACAATTCTGGCTACACAGCTTTACATTATGCTGCTCGCAGTGGACATTTGGACATCTGCAAAATATTGTTACAAAATGGGGCTAACATTAATGCAGTGACCCACGGAAAAGTGACATCTCTCCACAAAGCTGTAGCTGCAGACATTAACTATATTATGTATGATGTTAAATTACATTTTATTGGTGAGAGGGAAACTGCCTATTTCTTATATAGTGAAGTGTTTGTAGTGAAATACTTAATACAATCTGGTGCGAAAATAGACTTGCAAGATAATGATGGCCAAACAGTTCTTCACAAGGCAGTTGAAAATAATAAATTGGACCTGATACCCATACTGCTTGATGCTTGCCCTGATCTCAAATTAATAAAAAACAATAAAGGACATTATGCTACTGAATTTATTTCATGA

Protein

MPYILIRGNLASYGHKNPWRVLVSGLKAEDIEELKRFACGGYCDNSTIVYLQHPCVILSALEVLGYKVVASSSTAVKQDYNEYMWTMRKEFSEPEPSIIVEQDNITNFSKEAMHLSNYHSNKDDENVLSNLLNAPIAPITEDGVVYIAIKGSLHANDSSVFGLGEEEIKALTKKYPGSGVVVNGVSIKANVLDAINSLAQLGTNSSVCQTLTEMDWERGLWYAAFHGDKDRVQYLIDKANNAKEIVNAPDNSGYTALHYAARSGHLDICKILLQNGANINAVTHGKVTSLHKAVAADINYIMYDVKLHFIGERETAYFLYSEVFVVKYLIQSGAKIDLQDNDGQTVLHKAVENNKLDLIPILLDACPDLKLIKNNKGHYATEFIS

Uniprot

A0A0L7L445 A0A2J7RF27 A0A154P0G0

Pubmed

26227816

EMBL

JTDY01003128 KOB70101.1 NEVH01004414 PNF39439.1 KQ434787 KZC05337.1 + More

Proteomes

UP000037510 UP000235965 UP000076502

Pfam

PF12796 Ank_2 + More
PF00023 Ank

Interpro

IPR020683   Ankyrin_rpt-contain_dom        + More
IPR002110   Ankyrin_rpt
IPR036770   Ankyrin_rpt-contain_sf
IPR036717   GFRP_sf

SUPFAM

SSF48403 SSF48403

Gene 3D

1.25.40.20 3.30.1410.10

CDD

cd00204 ANK

ProteinModelPortal

A0A0L7L445 A0A2J7RF27 A0A154P0G0

PDB

4J8Y E-value=1.94037e-14, Score=192

KEGG

101744846 no KO assigned | (RefSeq) ankyrin repeat domain-containing protein 39-like

GO

GO:0009890 GO:0005515 GO:0035023 GO:0008239 GO:0008168 GO:0005737 GO:0016876 GO:0043039 GO:0004651 GO:0005634

Length:

385

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01678

Exp number, first 60 AAs:

0.00543

Total prob of N-in:

0.00361

outside

1 - 385

Pi

194.899947

Theta

127.616984

Tajima's D

1.209446

CLR

0

CSRT

0.723113844307785

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics