Gene

KWMTBOMO01981

Pre Gene Modal

BGIBMGA005908

Annotation

PREDICTED:_homocysteine_S-methyltransferase_1-like_[Bombyx_mori]

Location

Bomo_Chr4(+):9058966-9073392      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.831 Nuclear   Reliability : 1.557

CDS

ATGACTCCACCTAGCAGCGAGAATACAGAAGCTCCGCACATAGTTGTGCTGGACGGTGGGTTCTCGACACAGCTGTCTTGCCACGTCGGGCATGTCATCGACGGTGATCCACTGTGGAGTGCTCGTTTTATCCACACACATCCAAACGAAGTTGTCAATACGCATCTCGATTTTTTGAGAGCCGGGGCTGATTTAATCATTACCAATACATACCAAGCTTCAGTGGAAGGCTTCGTAGAGCATCTGGGAGTAACGAAAGAACAAGGTTATGAATTAATAGCCCGCGCAGTTCAGCTCGCTAAACAAGCCCGCACCCTCTATCTGGAAGAATACCGTGACTACGTTCAAAATGATGACATTCCACTCATAGTGGGTTCAGTCGGACCATATGGAGCTCATCTTCACGACGGTTCCGAATACGATGGCAGCTATGCAGACACCACGTCAATAGAGACTATGCGGGAATGGCATCGGCCCCGAATTCAAGCGCTGGTAGAAGCGGGAGTAGACCTCCTCGCACTAGAGACAATTCCATGTCAAGAGGAAGCAGAGACATTGTGTGATCTTCTACGGGAGTTTCCGGGTACAAAGGCTTGGCTTGCATTCAGTTGTAAAGACGATCAAAGTATAGCCCATGGAGAAAGTTTTCAAAAAGTCGCCAAGAAGTGTTGGGAATTGAATCCGGATCAGTTAGTGGCTGTAGGCGTGAATTGTTGTGCTCCGTCTTTCGTCTCTAACTTAATGAAGGGCTTCAATGACGACAGGCCACAAGCCCCAATTCCGCTTATTGTTTACCCTAATTCGGGCGAAAAATATAATCCTCAAATAGGTTGGATAGACCGTGACAAGTGCGAGCCCGTGGAGATATACATACAGGAGTGGCTGGACCTCGGCGTGAGGTACGTGGGCGGCTGCTGTCGCACGTACGCCGCAGACGTGTCTCGCATCCAAAACCAGGTGCACCGCTGGAGGGACAGATACCGCTTCCAAACCAAATACCAGTCGAATAACGGCTTGCATTAG

Protein

MTPPSSENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLIITNTYQASVEGFVEHLGVTKEQGYELIARAVQLAKQARTLYLEEYRDYVQNDDIPLIVGSVGPYGAHLHDGSEYDGSYADTTSIETMREWHRPRIQALVEAGVDLLALETIPCQEEAETLCDLLREFPGTKAWLAFSCKDDQSIAHGESFQKVAKKCWELNPDQLVAVGVNCCAPSFVSNLMKGFNDDRPQAPIPLIVYPNSGEKYNPQIGWIDRDKCEPVEIYIQEWLDLGVRYVGGCCRTYAADVSRIQNQVHRWRDRYRFQTKYQSNNGLH

Cofactor

Zn(2+)

Uniprot

A0A212ELT0   A0A2A4K233   S4PEC4   A0A194RBC3   I4DMV1   A0A194PK47   + More
A0A2H1WNP6   I4DNS4   A0A2W1BWI5   A0A2A4JKR0   A0A2H1W404   H9J3W9   D6WLX1   Q2F5Q8   A0A1Y1LCX8   A0A194R3H2   J3JVJ7   U4UMM8   A0A067RCJ3   A0A1Y1LAQ5   U4UBH3   E0VF06   A0A194PP35   A0A1W4XFS4   A0A195D393   A0A2P8Y0L0   E9ICG8   A0A212EJZ0   A0A0C9QPL2   A0A154P8H4   A0A026WEJ3   A0A0L7REK7   A0A1L8E2J7   A0A195E497   A0A1L8E337   A0A088AT35   A0A2A3EG72   A0A0T6ATL9   A0A195BTA6   A0A151WY87   A0A195FJ34   A0A158P2C9   E2AY58   A0A310SFJ9   A0A154P9T7   F4WUP0   A0A1B6KMJ4   A0A026WE74   A0A0C9Q5P9   A0A0J7L8R3   A0A088AT34   E2C787   A0A3Q0J450   A0A310SDJ9   Q17C46   A0A023EN97   A0A182QEK5   A0A336M8B7   A0A2A3EHV7   A0A0L7REK0   A0A151WZD2   A0A336MWE8   U5ETW9   A0A1Q3FBT9   A0A195FJ39   E2C786   A0A084VU14   A0A182SIH0   A0A182FNB5   B4KJP9   F4W3V2   A0A336M1G8   A0A3B0JAR3   A0A195D388   A0A0Q9XDK6   Q7PNI0   A0A2M4AK33   A0A336MU23   B0WQ03   A0A182IBS8   A0A182U326   A0A182RWD1   A0A182UVJ0   A0A182L023   A0A1S4GYK3   A0A1A9WKZ6   B4JBY2   A0A182MAL1   B4MZM7   A0A182VSH6   K7IQX7   A0A182X199   A0A182NT72   A0A195BV07   A0A158P2C4   B4LSJ7   A0A2J7RKH1   A0A232EUN7   A0A1B0CMQ5  

Pubmed

22118469    23622113    26354079    22651552    28756777    19121390    + More
18362917    19820115    28004739    22516182    23537049    24845553    20566863    29403074    21282665    24508170    30249741    21347285    20798317    21719571    17510324    24945155    24438588    17994087    18057021    12364791    20966253    20075255    28648823   

EMBL

AGBW02013994    OWR42421.1    NWSH01000276    PCG77823.1    GAIX01004582    JAA87978.1    + More
KQ460398    KPJ15128.1    AK402619    BAM19241.1    KQ459601    KPI93811.1    ODYU01009901    SOQ54627.1    AK403113    BAM19564.1    KZ149915    PZC77984.1    NWSH01001243    PCG71992.1    ODYU01006119    SOQ47686.1    BABH01028971    KQ971343    EFA03390.1    DQ311365    ABD36309.1    GEZM01061138    GEZM01061137    JAV70748.1    KQ460949    KPJ10391.1    APGK01052429    APGK01052430    APGK01052431    BT127265    KB741212    AEE62227.1    ENN72721.1    KB632279    ERL91280.1    KK852595    KDR20626.1    GEZM01061142    JAV70739.1    ERL91279.1    DS235100    EEB11980.1    KQ459598    KPI94509.1    KQ976885    KYN07331.1    PYGN01001080    PSN37795.1    GL762293    EFZ21732.1    AGBW02014361    OWR41807.1    GBYB01005559    JAG75326.1    KQ434844    KZC08153.1    KK107250    QOIP01000002    EZA54368.1    RLU25884.1    KQ414609    KOC69269.1    GFDF01001180    JAV12904.1    KQ979657    KYN19978.1    GFDF01001179    JAV12905.1    KZ288254    PBC30755.1    LJIG01022831    KRT78495.1    KQ976408    KYM91171.1    KQ982661    KYQ52661.1    KQ981523    KYN40277.1    ADTU01007113    GL443762    EFN61654.1    KQ773364    OAD52390.1    KZC08154.1    GL888375    EGI62037.1    GEBQ01027299    JAT12678.1    EZA54367.1    RLU26186.1    GBYB01009423    JAG79190.1    LBMM01000233    KMR03564.1    GL453340    EFN76200.1    OAD52389.1    CH477313    EAT43856.1    GAPW01002715    JAC10883.1    AXCN02000728    UFQT01000244    SSX22298.1    PBC30756.1    KOC69268.1    KQ982639    KYQ53260.1    UFQT01002653    SSX33861.1    GANO01002589    JAB57282.1    GFDL01010082    JAV24963.1    KYN40282.1    EFN76199.1    ATLV01016628    KE525098    KFB41458.1    CH933807    EDW11494.1    KRG02721.1    GL887473    EGI71120.1    SSX22297.1    OUUW01000004    SPP79417.1    KYN07326.1    KRG02722.1    AAAB01008964    EAA12151.5    GGFK01007793    MBW41114.1    SSX33862.1    DS232031    EDS32593.1    APCN01000735    CH916368    EDW04085.1    AXCM01001483    CH963920    EDW77812.1    KYM91165.1    ADTU01007108    CH940649    EDW64819.1    NEVH01002770    PNF41320.1    NNAY01002107    OXU22063.1    AJWK01019066    AJWK01019067    AJWK01019068    AJWK01019069    AJWK01019070    AJWK01019071    AJWK01019072    AJWK01019073   

Proteomes

UP000007151    UP000218220    UP000053240    UP000053268    UP000005204    UP000007266    + More
UP000019118    UP000030742    UP000027135    UP000009046    UP000192223    UP000078542    UP000245037    UP000076502    UP000053097    UP000279307    UP000053825    UP000078492    UP000005203    UP000242457    UP000078540    UP000075809    UP000078541    UP000005205    UP000000311    UP000007755    UP000036403    UP000008237    UP000079169    UP000008820    UP000075886    UP000030765    UP000075901    UP000069272    UP000009192    UP000268350    UP000007062    UP000002320    UP000075840    UP000075902    UP000075900    UP000075903    UP000075882    UP000091820    UP000001070    UP000075883    UP000007798    UP000075920    UP000002358    UP000076407    UP000075884    UP000008792    UP000235965    UP000215335    UP000092461   

PRIDE

H9J3W9    Q2F5Q8   

Pfam

PF02574   S-methyl_trans        + More
PF00069   Pkinase

Interpro

IPR036589   HCY_dom_sf        + More
IPR017226   Betaine-hCys_S-MeTrfase_BHMT       
IPR003726   HCY_dom       
IPR009447   PIGW/GWT1       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       

SUPFAM

SSF82282   SSF82282        + More
SSF56112   SSF56112       

Gene 3D

3.20.20.330    

ProteinModelPortal

A0A212ELT0   A0A2A4K233   S4PEC4   A0A194RBC3   I4DMV1   A0A194PK47   + More
A0A2H1WNP6   I4DNS4   A0A2W1BWI5   A0A2A4JKR0   A0A2H1W404   H9J3W9   D6WLX1   Q2F5Q8   A0A1Y1LCX8   A0A194R3H2   J3JVJ7   U4UMM8   A0A067RCJ3   A0A1Y1LAQ5   U4UBH3   E0VF06   A0A194PP35   A0A1W4XFS4   A0A195D393   A0A2P8Y0L0   E9ICG8   A0A212EJZ0   A0A0C9QPL2   A0A154P8H4   A0A026WEJ3   A0A0L7REK7   A0A1L8E2J7   A0A195E497   A0A1L8E337   A0A088AT35   A0A2A3EG72   A0A0T6ATL9   A0A195BTA6   A0A151WY87   A0A195FJ34   A0A158P2C9   E2AY58   A0A310SFJ9   A0A154P9T7   F4WUP0   A0A1B6KMJ4   A0A026WE74   A0A0C9Q5P9   A0A0J7L8R3   A0A088AT34   E2C787   A0A3Q0J450   A0A310SDJ9   Q17C46   A0A023EN97   A0A182QEK5   A0A336M8B7   A0A2A3EHV7   A0A0L7REK0   A0A151WZD2   A0A336MWE8   U5ETW9   A0A1Q3FBT9   A0A195FJ39   E2C786   A0A084VU14   A0A182SIH0   A0A182FNB5   B4KJP9   F4W3V2   A0A336M1G8   A0A3B0JAR3   A0A195D388   A0A0Q9XDK6   Q7PNI0   A0A2M4AK33   A0A336MU23   B0WQ03   A0A182IBS8   A0A182U326   A0A182RWD1   A0A182UVJ0   A0A182L023   A0A1S4GYK3   A0A1A9WKZ6   B4JBY2   A0A182MAL1   B4MZM7   A0A182VSH6   K7IQX7   A0A182X199   A0A182NT72   A0A195BV07   A0A158P2C4   B4LSJ7   A0A2J7RKH1   A0A232EUN7   A0A1B0CMQ5  

PDB

5DMN     E-value=4.20282e-52,     Score=516

KEGG

101745086    K00547 homocysteine S-methyltransferase [EC:2.1.1.10] | (RefSeq) homocysteine S-methyltransferase 1-

PATHWAY

00270    Cysteine and methionine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0047150   GO:0009086   GO:0008270   GO:0046872   GO:0008168   GO:0050667   GO:0008898   GO:0046498   GO:0019284   GO:0016021   GO:0016746   GO:0006506   GO:0033528   GO:0004672   GO:0005524  

PANTHER

PTHR20661  

Length:

340

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00966999999999998

Exp number, first 60 AAs:

0.00588

Total prob of N-in:

0.01089

outside

1  -  340

 

 

Pi

333.252379

Theta

213.229129

Tajima's D

1.785317

CLR

0.209782

CSRT

0.847307634618269

Interpretation

Uncertain