SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01980
Pre Gene Modal
BGIBMGA005912
Annotation
hypothetical_protein_KGM_03031_[Danaus_plexippus]
Location
Bomo_Chr4(-):9011871-9038111      View in EpiBrowser
Full name
Dipeptidase      
Location in the cell
Mitochondrial   Reliability : 1.592 Nuclear   Reliability : 1.947
 

Sequence

CDS
ATGGTTGATGGAGAAGCCAGCGGCCACGGTGCTACGGTCGGAAACCCACCGTCGGATTGTGTTGATTGTGAAGCTTGCATAGCATTAGCTGCCCAGCGACAGTGTCTAAGTGAACACATATCAAAACATGATTTAGACTTAGTTTGCAATTGTAATATACAACAGAACAACTACCTAAACTGTCATCGAAATGTTTCTGATCATCGAGGCCACACTCTAAATATTTATGATTTAGAGAGAATCAAAAGAGAAACCGATAGAAGTCTAATAAACGTGGGATCACACCAAAGTCTCGACAGAAAACAAACAAGAAATAAATCCATTGGTGTCTCTAATTATATTTCGAAACAATTAATATCGTATGACCCAAGAAATACTCTTGTCCAAAAAATCAAGAGAAAACTATCTAATTTGAAAAAAATCGGCGGAGATGCTATCACCAAGAAACATCAAAACGCTGTCCAACTCGCCGATATAGCATCCGGGTCTACCAGCTCCCTCAAAAAACTATCTATGCTGTCGATTGCGGACAAACCACAAAGAAGAGTTAACAGCCATAGCAACATATATCCATCGACGACAGTAAATAGAGACGACTACAAACACAAAGCGTCAACATACGCAAATTTTTCTGGTAACGTGGACCAATGCTTTGATAGACTGAAAGATTCCAATACAGTCATGGATATAAACAATACGACACAAAAAATAAGAACTTTTGATAACAATCAGGAGCTGATCCGCAGGAATAATGTGGATATAGATGCAATGAAATTTTCTACTTTAGACAATCGAAGCAGATGTAGAAGTATCCGTAGACAACTATCATACAACGATTTTCCTAGTGATCGATGCAAGGAGAAAATCACGGAGACATGGATGACAAATGAAAATACTATTGAGTCCAGGAGTACTCGAAGTGATTTAGTCGACGATGATGTCCACACGTTTATTGACAACGACGTAGTGGCAATGACAGGAACGAGGCCGACACACGCACATTGTACCTGCACCCAGAGCTATGATAATAGAATGCCTTCTTTATTCTACGACTCGCAAGGCAAGAAACGGTCGGCGCCAGCACCTGACGTGACAGAGCGTAGTCAAGGGACTCGCGCAAACGTTTGTAGCGCTTGCAAAGTACCGCAATGGATATCTACTGGTACAACATCGACTACAAGCCACAGTTCAACTACAACTGGAAATTCTTCTCGTTTTTCAATATGGCACCGTCGATGGTGCTGCGTAGCAGTTTTAGTACTGGTAGCCGGGACCGCGTGCGTAGCAGGCCCTCTTGCTTTGAGAGCTCCTCCAGGCGCTCCGATGCATGAAAGACTTCGACTGGCCGAAAGACTATTACACGATACGCCTCTTATCGACGGACACAACGACTTGCCTTGGAATATAAGAAAATTTCTACACAACAAGATTAAAGACTTTTCGTTTGATGAGGACTTGAGGACGATATCACCATGGGCGACGAGCTCGTGGAGCCACACTGATTTGCCGAGGTTAAAACAAGGCAGGGTCGCTGCTCAGTTCTGGGCGGCGTACGTGCCTTGCGATGCGCAACACCGCGACGCCGTGCAGCTGACGTTCGAGCAAATTGACCTCATCCAGCGACTCACTGAAAAATATCAACCTCAGCTTACAATGTGCACTTCTGCCGAAGATATTAAAATAGCGCACGCTAATCATCGTGTATGCTCGTTGATTGGTGTCGAAGGCGGTCACGCTATTGGCAGTTCTCTTGGGGTGCTAAGAACACTGTACCAGGTCGGCGTTCGTTACTTGACATTGACCTCTACTTGTGACACGCCCTGGGCTGAGTGCGCTTCTGCTGACAGAGTTGAACCATCGCCCCGGGGAGGACTCACGGCTTTTGGAAAGGTAGTAATAAAGGAAATGAACAGATTGGGAATGCTAGTGGATTTATCTCACGTGTCAGAGCGAACTATGCGTGATGCTCTGGCTGTCTCACGAGCACCAGTGCTTTTTTCTCACTCTTCTGCACGAGCTCTTTGCAACGTTACTCGTAACGTTCCTGACACAATACTGAGAATGTTAGCTGCCAACAAAGGACTCATAATGGTGAATTTTTATACTTCATTCCTGACTTGTAAGGAAACAGCAACCGTTCAAGATGCGATTGCTCACATAAATCATATACGGAACGTGGCCGGTGTGGACAGCGTCGGCCTTGGCGCCGGGTACGATGGGATTAATTATACACCACAAGGTCTGGAAGATGTATCATCCTATCCATTGTTATTTGCCGAGCTGATGGAGGCAGGCTGGAGCATAGAAGATCTTCGTAAGCTTGCCGGACTGAATCTACTCCGGGTAATGGGCGCAACAGAGAGGGTAGCTAAAGAATTGGCAGCTGCTCGTGTTGTACCTTACGAAGACGTGCCACCGCGAATTTTCGACGCTCATAACTGCTCCAGTCAAGATGTTTAA
Protein
MVDGEASGHGATVGNPPSDCVDCEACIALAAQRQCLSEHISKHDLDLVCNCNIQQNNYLNCHRNVSDHRGHTLNIYDLERIKRETDRSLINVGSHQSLDRKQTRNKSIGVSNYISKQLISYDPRNTLVQKIKRKLSNLKKIGGDAITKKHQNAVQLADIASGSTSSLKKLSMLSIADKPQRRVNSHSNIYPSTTVNRDDYKHKASTYANFSGNVDQCFDRLKDSNTVMDINNTTQKIRTFDNNQELIRRNNVDIDAMKFSTLDNRSRCRSIRRQLSYNDFPSDRCKEKITETWMTNENTIESRSTRSDLVDDDVHTFIDNDVVAMTGTRPTHAHCTCTQSYDNRMPSLFYDSQGKKRSAPAPDVTERSQGTRANVCSACKVPQWISTGTTSTTSHSSTTTGNSSRFSIWHRRWCCVAVLVLVAGTACVAGPLALRAPPGAPMHERLRLAERLLHDTPLIDGHNDLPWNIRKFLHNKIKDFSFDEDLRTISPWATSSWSHTDLPRLKQGRVAAQFWAAYVPCDAQHRDAVQLTFEQIDLIQRLTEKYQPQLTMCTSAEDIKIAHANHRVCSLIGVEGGHAIGSSLGVLRTLYQVGVRYLTLTSTCDTPWAECASADRVEPSPRGGLTAFGKVVIKEMNRLGMLVDLSHVSERTMRDALAVSRAPVLFSHSSARALCNVTRNVPDTILRMLAANKGLIMVNFYTSFLTCKETATVQDAIAHINHIRNVAGVDSVGLGAGYDGINYTPQGLEDVSSYPLLFAELMEAGWSIEDLRKLAGLNLLRVMGATERVAKELAAARVVPYEDVPPRIFDAHNCSSQDV

Summary

Catalytic Activity
Hydrolysis of dipeptides.
Cofactor
Zn(2+)
Subunit
Homodimer; disulfide-linked.
Similarity
Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
Uniprot
A0A2W1BF33   A0A2H1X0H7   A0A2A4K2D5   A0A194RCY2   A0A194PLE1   A0A212ELR9   + More
EC Number
3.4.13.19
Pubmed
28756777    26354079    22118469   
EMBL
KZ150090    PZC73692.1    ODYU01012447    SOQ58752.1    NWSH01000276    PCG77840.1    + More
KQ460398    KPJ15130.1    KQ459601    KPI93813.1    AGBW02013994    OWR42423.1   
Proteomes
UP000218220    UP000053240    UP000053268    UP000007151   
Pfam
PF01244   Peptidase_M19
Interpro
IPR000180   Dipep_AS        + More
IPR032466   Metal_Hydrolase       
IPR008257   Pept_M19       
SUPFAM
SSF51556   SSF51556       
CDD
cd01301  rDP_like
ProteinModelPortal
A0A2W1BF33   A0A2H1X0H7   A0A2A4K2D5   A0A194RCY2   A0A194PLE1   A0A212ELR9   + More
PDB
1ITU     E-value=3.13976e-89,     Score=841

Ontologies

KEGG
101746499    K01273 membrane dipeptidase [EC:3.4.13.19] | (RefSeq) dipeptidase 1-like
GO
GO:0008239   GO:0008235   GO:0031225   GO:0046872   GO:0016805   GO:0006508   GO:0008168   GO:0005737   GO:0016876   GO:0043039   GO:0004651   GO:0005634  
PANTHER
PTHR10443  

Topology

Subcellular location
Membrane  
Length:
819
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.36746
Exp number, first 60 AAs:
0
Total prob of N-in:
0.10477
outside
1  -  819
 
 

Population Genetic Test Statistics

Pi
278.525844
Theta
184.635232
Tajima's D
1.608109
CLR
0.005763
CSRT
0.807909604519774
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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