Gene

KWMTBOMO01972

Annotation

thioredoxin_family_Trp26_[Bombyx_mori]

Location

Bomo_Chr4(+):8923862-8928277      View in EpiBrowser

Full name

PITH domain-containing protein CG6153       + More
PITH domain-containing protein GA19395      
PITH domain-containing protein 1      

Location in the cell

Nuclear   Reliability : 3.582

CDS

ATGTCTCATCATCATTGTAACCATGACCATGATCACGGTAGTGTTGAAGATATTGGTATACAATACAATCTTCATGAAAAGATTGATTTGGACCACTTGGAATGTTTGAACGAATCCCTTGAGGGTTCGGGTAAAAGTGTTTTTAAACCTTGGGACAAAAGATTGGATAGAAGCAAATTTGTTGAAAGTGATGCTGATGAAGAACTGTTGTTTAATATACCATTCACTGGAAATATAAAACTTAAAGGAATAAAGGTTGCATCAGAAGATACAGATTCACATCCATCAAAATTAAGATTGTTTAAAAACAGGCCAAATATGACTTTTGATGATGTTATGATTGAACCTGATCAAGTATTTGAGCTACAAAAGGATACAGATGGAATACTTGAATACTGTCCAAAGATTGTTACATTTTCTTCAGTATCACATCTAACAATGCACTTTCCAAAGAACTTTGGGGCAGAAACAACAAAAATTTATTACATTGGATTAAAAGGAGAATGGACACCTAGTCATAGGCATGGTGTTACCTTATGCTCATATGAGGTTATGCCCAATCTAGATGATCATAAGTTGAAGCACTTAGATTCTGTAGCCAGGACAATAGAATAA

Protein

MSHHHCNHDHDHGSVEDIGIQYNLHEKIDLDHLECLNESLEGSGKSVFKPWDKRLDRSKFVESDADEELLFNIPFTGNIKLKGIKVASEDTDSHPSKLRLFKNRPNMTFDDVMIEPDQVFELQKDTDGILEYCPKIVTFSSVSHLTMHFPKNFGAETTKIYYIGLKGEWTPSHRHGVTLCSYEVMPNLDDHKLKHLDSVARTIE

Similarity

Belongs to the PITHD1 family.

Keywords

Complete proteome   Reference proteome  

Feature

chain  PITH domain-containing protein CG6153

Uniprot

Q2F5U9   A0A2W1BJ17   A0A2A4K2F5   A0A212ELQ6   A0A2H1VDL3   S4PFI0   + More
A0A194PRQ6   A0A194RBD2   A0A1I8PDQ6   A0A0L0CB51   A0A1B6EDN5   A0A1I8MHK5   A0A1W4WGH4   A0A2P8XTX9   A0A034WMF6   A0A1W4V5X1   A0A1B0AGT1   A0A0K8VUC6   B3N3D5   B3MNJ6   B4P2I0   A0A182KBW3   E1JHG8   Q9VK68   A0A1Y1K585   A0A1W4UTK1   A0A1A9YFP6   A0A1B0APY3   A0A069DQI4   B4MZA5   A0A182JD90   A0A182KJU4   B4IEB3   B4Q483   A0A182UPR7   A0A1A9VH78   A0A0A1XDG5   A0A182XM89   A0A1S4H3G1   A0A182I0S6   Q7Q0N8   A0A0V0GEP3   E0VEM5   A0A3B0JP20   A0A182RAA7   A0A131XY12   A0A182PK63   A0A1B6HQ51   V5GC65   A0A023F8N1   B0W9T5   A0A0P4W2K9   T1I987   D6WMZ6   A0A182VSW5   A0A1B0FC68   A0A182YHE7   Q16TB2   A0A182SBW9   B7PLM3   R4WDW5   A0A182G8D0   A0A182Q9T6   B4HB35   Q29L80   B4LSY6   A0A1B6KMR1   A0A067QQA2   W8C8X9   A0A182N8S5   A0A182M834   A0A0A9XJ37   B4JCD3   B4KEQ0   A0A1Q3F9M2   J3JZI6   A0A2R5LI37   A0A131XHU5   A0A1E1X4P9   A0A3M6V6G2   A0A182UFU6   S4R656   A0A131Z2M1   A0A023GG31   A0A1E1XRT2   A0A224Z0T2   E9G347   F7D6T5   A0A1A9WME5   A0A1L8HFT1   Q6DJI5   A0A1U8CB77   F7I905   A0A2K5SI08   A5PK88   D2GWC7   H0VCT1   A0A2M3Z9V9   A0A1L8DU14   H9F8F2  

Pubmed

28756777    22118469    23622113    26354079    26108605    25315136    + More
29403074    25348373    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    28004739    26334808    20966253    22936249    25830018    12364791    20566863    25474469    27129103    18362917    19820115    25244985    17510324    23691247    26483478    15632085    24845553    24495485    25401762    26823975    22516182    28049606    28503490    30382153    26830274    29209593    28797301    21292972    17495919    27762356    26319212    28071753    25243066    19393038    20010809    21993624    25319552   

EMBL

DQ311324    ABD36268.1    KZ150090    PZC73684.1    NWSH01000276    PCG77822.1    + More
AGBW02013994    OWR42430.1    ODYU01001982    SOQ38929.1    GAIX01004002    JAA88558.1    KQ459601    KPI93820.1    KQ460398    KPJ15138.1    JRES01000753    KNC28699.1    GEDC01001267    JAS36031.1    PYGN01001356    PSN35463.1    GAKP01003118    JAC55834.1    GDHF01010159    JAI42155.1    CH954177    EDV58775.1    CH902620    EDV32104.1    CM000157    EDW88210.1    AE014134    ACZ94252.2    AY060988    GEZM01094668    JAV55621.1    JXJN01001608    GBGD01002953    JAC85936.1    CH963913    EDW77378.2    CH480831    EDW45940.1    CM000361    CM002910    EDX04833.1    KMY89948.1    GBXI01005311    JAD08981.1    AAAB01008980    APCN01005252    EAA13935.2    GECL01000295    JAP05829.1    DS235093    EEB11831.1    OUUW01000006    SPP82102.1    GEFM01003897    JAP71899.1    GECU01030907    GECU01027149    JAS76799.1    JAS80557.1    GALX01006852    JAB61614.1    GBBI01000990    JAC17722.1    DS231866    EDS40502.1    GDKW01000847    JAI55748.1    ACPB03017049    KQ971343    EFA03260.1    CCAG010022267    CH477653    CH477411    EAT37759.1    EAT41454.1    ABJB010904078    ABJB010982645    DS741094    EEC07495.1    AK417919    BAN21134.1    JXUM01047683    KQ561529    KXJ78265.1    AXCN02001863    CH479247    EDW37838.1    CH379061    CH940649    EDW64897.1    GEBQ01027232    JAT12745.1    KK853138    KDR10778.1    GAMC01002649    JAC03907.1    AXCM01001249    GBHO01023973    GBRD01017829    GDHC01006402    JAG19631.1    JAG47998.1    JAQ12227.1    CH916368    EDW04166.1    CH933807    EDW12950.1    GFDL01010847    JAV24198.1    BT128668    AEE63625.1    GGLE01005040    MBY09166.1    GEFH01003375    JAP65206.1    GFAC01004938    JAT94250.1    RCHS01000074    RMX61178.1    GEDV01002908    JAP85649.1    GBBM01002526    JAC32892.1    GFAA01001668    JAU01767.1    GFPF01012330    MAA23476.1    GL732530    EFX86154.1    CM004468    OCT94943.1    BC075194    GAMT01008242    GAMS01007093    GAMS01007092    GAMR01002754    GAMR01002753    GAMQ01005143    GAMP01009333    GAMP01009332    JAB03619.1    JAB16043.1    JAB31178.1    JAB36708.1    JAB43422.1    BC142400    AAI42401.1    ACTA01089707    GL192357    EFB27140.1    AAKN02028680    GGFM01004563    MBW25314.1    GFDF01004190    JAV09894.1    JU327154    JU327155    AFE70911.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000053240    UP000095300    UP000037069    + More
UP000095301    UP000192223    UP000245037    UP000192221    UP000092445    UP000008711    UP000007801    UP000002282    UP000075881    UP000000803    UP000092443    UP000092460    UP000007798    UP000075880    UP000075882    UP000001292    UP000000304    UP000075903    UP000078200    UP000076407    UP000075840    UP000007062    UP000009046    UP000268350    UP000075900    UP000075885    UP000002320    UP000015103    UP000007266    UP000075920    UP000092444    UP000076408    UP000008820    UP000075901    UP000001555    UP000069940    UP000249989    UP000075886    UP000008744    UP000001819    UP000008792    UP000027135    UP000075884    UP000075883    UP000001070    UP000009192    UP000275408    UP000075902    UP000245300    UP000000305    UP000002280    UP000091820    UP000186698    UP000189706    UP000008225    UP000233040    UP000009136    UP000008912    UP000005447   

PRIDE

Q2F5U9    E1JHG8    Q9VK68    Q6DJI5   

Pfam

PF06201   PITH

Interpro

IPR010400   PITH_dom        + More
IPR037047   PITH_dom_sf       
IPR008979   Galactose-bd-like_sf       

SUPFAM

SSF49785   SSF49785       

Gene 3D

2.60.120.470    

ProteinModelPortal

Q2F5U9   A0A2W1BJ17   A0A2A4K2F5   A0A212ELQ6   A0A2H1VDL3   S4PFI0   + More
A0A194PRQ6   A0A194RBD2   A0A1I8PDQ6   A0A0L0CB51   A0A1B6EDN5   A0A1I8MHK5   A0A1W4WGH4   A0A2P8XTX9   A0A034WMF6   A0A1W4V5X1   A0A1B0AGT1   A0A0K8VUC6   B3N3D5   B3MNJ6   B4P2I0   A0A182KBW3   E1JHG8   Q9VK68   A0A1Y1K585   A0A1W4UTK1   A0A1A9YFP6   A0A1B0APY3   A0A069DQI4   B4MZA5   A0A182JD90   A0A182KJU4   B4IEB3   B4Q483   A0A182UPR7   A0A1A9VH78   A0A0A1XDG5   A0A182XM89   A0A1S4H3G1   A0A182I0S6   Q7Q0N8   A0A0V0GEP3   E0VEM5   A0A3B0JP20   A0A182RAA7   A0A131XY12   A0A182PK63   A0A1B6HQ51   V5GC65   A0A023F8N1   B0W9T5   A0A0P4W2K9   T1I987   D6WMZ6   A0A182VSW5   A0A1B0FC68   A0A182YHE7   Q16TB2   A0A182SBW9   B7PLM3   R4WDW5   A0A182G8D0   A0A182Q9T6   B4HB35   Q29L80   B4LSY6   A0A1B6KMR1   A0A067QQA2   W8C8X9   A0A182N8S5   A0A182M834   A0A0A9XJ37   B4JCD3   B4KEQ0   A0A1Q3F9M2   J3JZI6   A0A2R5LI37   A0A131XHU5   A0A1E1X4P9   A0A3M6V6G2   A0A182UFU6   S4R656   A0A131Z2M1   A0A023GG31   A0A1E1XRT2   A0A224Z0T2   E9G347   F7D6T5   A0A1A9WME5   A0A1L8HFT1   Q6DJI5   A0A1U8CB77   F7I905   A0A2K5SI08   A5PK88   D2GWC7   H0VCT1   A0A2M3Z9V9   A0A1L8DU14   H9F8F2  

PDB

1XOY     E-value=1.14636e-09,     Score=148

KEGG

692914    no KO assigned | (RefSeq) thioredoxin family Trp26

GO

GO:0005634  

Length:

204

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00324

Exp number, first 60 AAs:

0

Total prob of N-in:

0.19415

outside

1  -  204

 

 

Pi

55.288142

Theta

15.208341

Tajima's D

-1.248369

CLR

2.406284

CSRT

0.0947452627368632

Interpretation

Uncertain