Gene

KWMTBOMO01966  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005918

Annotation

PREDICTED:_nucleolar_protein_10_[Bombyx_mori]

Location

Bomo_Chr4(+):8844552-8849780      View in EpiBrowser

Full name

Nucleolar protein 10      

Location in the cell

Nuclear   Reliability : 4.549

CDS

ATGCAAGTTTCCGAAATAGATAATGTAAAAATTTACAATTTAAGTGTTGGAAAATCTATACCAGATTGGCTCTCTGAGAGGAAAAAACGTGCCTTATTAAAGAAAAATGTAGACTTACGAAGAAGAATAGAACTCATTCAAGAGTTTGATATGCCTGGTGTGAGCACCTGTCTAAAAGTGTCGAAAGATGGGCAGTACATAATGGCAACTGGTATTTACAAACCTAGAATTAAATGTTTTGATGTTAATAACTTATCATTGAAATTTGAGAGGTGTATGGATTCTGAAGTCATTAAATTTGAAATTCTAAGTGAAGACTACACAAAGATTGTGTTTTTACAATGTGATAGATATGTTGAGTTTCATGTGGGTCATGGCCGACATTATAGACTCCGAGTTCCACGTTTCGGAAGAGATATAGCATACCACAAACCTTCTTGTGACCTCTTTGTAGTTGGAAATTCCTCGGAAATTTATAGATTGAATTTAGAAATTGGCCAATTTTTAGCACCATATTCTACCAAAGCAACTGAAATGAACTGTTGTTCTGTGAATGAAGAACATGGCTTATTGGTTACTGGAACAGAAACTGGACATGTTGAAGCTTGGGATCCGCGCACAAAGACGCAACAAGGAATTTTAGATTGCGCTATGCATTGTACGGATTCTAAATATGGAAACTGTAAACTGCCTGCTATAACTGCATTAAAATTTGACGGTGCACTAAATATGGGTGTTGGAACATCTACTGGACATATACTTCTTTATGATATAAGATCTAGTAAGCCTCTTCTAATTAAAGATCATATGAACGAAACGCCCATAAAATGTATCGAATTTCACAAAAGCATGAACTATATATATTCCATGGATTCTGCAGTTGTAAAAATTTGGGATAAAACTACTGGGAAGCAATATACCAGCATAGAATCATCAGTGGATTTCAATGATTTGTGTGTTATACCTAACACAGGATTAAGTATGATGGCAGTCGAAGACCAAAAAATGCAAATATACTACATACCATCATTAGGTCCTGCTCCGAGGTGGTGTGCCTTTTTAGATAATTTGACAGATGAACTTGAAAGTTCTGCTGCACAGACTGTTTATGATGATTATAAATTTGTGACAAAACAAGAACTAGAATCTTTAGGCTTGGATCACTTGCTTGGCACTAATCTTTTAAGAGCATATATGCATGGATACTTTGTGGATATACGACTTTACAAGAGGGCAAAATCGATAGCTGAACCATTTGCATTTGAAAACTATAAGAAACAGAAAATAAGGGAAAAGATTGAAGAGGAAAGACCATCTAGATTAAAAGTAGACGAAAATCTTCCTAAAGTCAATAGGGAGTTGGCATCTAGGATATTGGGAGATGAAGGGCGTAAGAAAAAATACACCAGCAATTTGCTTAAAGATGAAAGATTTAAGGAATTATTTGAGAATCCTGATTTTGAAGTAGATAAAGATGCTGCAGAATATCGTTTACTTAATCCAGTTTTGTCGAGAAGGGATAAAAACAAAGAAAACAATTCAGAGAGCCAGATCGCACAGGTGCCTGAAGCGGCAGAAAAAGATTCTGACGCCGAGCTATACGAGTCGAGCGATGACGATGCTGGGAGCTCGGACGAGGACCGTTCCTGGGTCAAAGAAGTTAAAAAACAACACAAAATAATTCGCAAGAAACATGAACTAGAAGAGGACCTTGCAACAGACGGGAAATTCTACGAATTGAATAGTGCACCGAAAACTACAAGTAGTATTAAGAGCATAACAAGAGTAAGCAAGAAAAGCTTGGGCGATCGGCTAGCTAACGAAGGCTTCACAATGGTCACTGGGACCAGCGGAAATAGAGAAATGAAATTTACAATGCGAGGGAAGAAATCTATATCAGATAATCAGAAAAAAATGAGGAAGCATCACCAAGAGAGGAGGCAGATTGTCCGAAAAACGGGATATTTAATGAAAAAGAAATTAAGTAAAATGTGA

Protein

MQVSEIDNVKIYNLSVGKSIPDWLSERKKRALLKKNVDLRRRIELIQEFDMPGVSTCLKVSKDGQYIMATGIYKPRIKCFDVNNLSLKFERCMDSEVIKFEILSEDYTKIVFLQCDRYVEFHVGHGRHYRLRVPRFGRDIAYHKPSCDLFVVGNSSEIYRLNLEIGQFLAPYSTKATEMNCCSVNEEHGLLVTGTETGHVEAWDPRTKTQQGILDCAMHCTDSKYGNCKLPAITALKFDGALNMGVGTSTGHILLYDIRSSKPLLIKDHMNETPIKCIEFHKSMNYIYSMDSAVVKIWDKTTGKQYTSIESSVDFNDLCVIPNTGLSMMAVEDQKMQIYYIPSLGPAPRWCAFLDNLTDELESSAAQTVYDDYKFVTKQELESLGLDHLLGTNLLRAYMHGYFVDIRLYKRAKSIAEPFAFENYKKQKIREKIEEERPSRLKVDENLPKVNRELASRILGDEGRKKKYTSNLLKDERFKELFENPDFEVDKDAAEYRLLNPVLSRRDKNKENNSESQIAQVPEAAEKDSDAELYESSDDDAGSSDEDRSWVKEVKKQHKIIRKKHELEEDLATDGKFYELNSAPKTTSSIKSITRVSKKSLGDRLANEGFTMVTGTSGNREMKFTMRGKKSISDNQKKMRKHHQERRQIVRKTGYLMKKKLSKM

Similarity

Belongs to the WD repeat NOL10/ENP2 family.

Keywords

Coiled coil   Nucleus   Repeat   WD repeat  

Feature

chain  Nucleolar protein 10

Uniprot

A0A2A4JP21   A0A1E1VZW3   A0A194RC14   A0A2W1BUQ5   A0A194PK61   S4P9D9   + More
A0A154PRQ7   A0A0T6AW88   N6T5F3   U4UR33   D6WM93   E2AQ01   A0A0J7KWI0   A0A2J7RB14   A0A1Y1N4N5   A0A0M8ZZZ3   B0W9D7   A0A232F1I7   A0A195C2B6   A0A1Q3EZ28   K7IQ04   A0A087ZP40   A0A026WCB1   A0A2A3EPW5   A0A310SQD3   F4WA64   A0A195E2Z8   A0A158NHK7   A0A1S4FZG8   Q16J33   E2B8U2   A0A151WGI3   A0A195AUV9   A0A0V0G8A4   K1R4I9   E0VRE3   A0A1B6I2H7   A0A1D2NCY1   A0A1I8MKS0   A0A1B6EAU7   G1KMW7   A0A1B6FCC2   A0A1I8PFB3   A0A0J9R2B7   B4P0K4   Q9V3P2   B4HXG4   A0A0L0BZ62   E1BXP3   V9KAD6   A0A0M4E2Q1   B3MLN7   B4JEB3   A0A1B0DMT6   B4MZB7   A0A218VBM6   A0A1J1INK9   G1NMK8   A0A1L8GBC6   B4M8S5   Q7T0Q5   A0A2I0UA43   A0A2D4EZ70   A0A1V4JNF0   A0A2I0MTI9   A0A0B8RU73   A0A091HJA4   A0A2D4Q3R9   A0A2D4KKC6   Q29KB7   B4KEI5   A0A3B0JJD8   B4GX72   J3S971   U3IR06   A0A0F7Z6T7   H2P6Z0   A0A1S3H7K4   A0A3P9MDA6   T1DA29   A7SEV8   A0A0K8UB80   A0A3P4LVB5   H0ZS45   A0A0A1WX37   A0A3B3XW02   A0A087XVJ5   A0A3B3V0Q5   U6CQM7   A0A2Y9HUF6   A0A1U7RX59   B4Q5I9   A0A034W360   A0A3P9L1P5   A0A2Y9K6G5   A0A336M9U5   U3IR03   A0A2B4SQF4   W8C1Y9  

Pubmed

26354079    28756777    23622113    23537049    18362917    19820115    + More
20798317    28004739    28648823    20075255    24508170    30249741    21719571    21347285    17510324    22992520    20566863    27289101    25315136    22936249    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    15592404    24402279    20838655    27762356    23371554    25476704    15632085    23025625    23749191    17554307    23758969    17615350    20360741    25830018    25348373    24495485   

EMBL

NWSH01000880    PCG73741.1    GDQN01010786    JAT80268.1    KQ460398    KPJ15142.1    + More
KZ149895    PZC78778.1    KQ459601    KPI93826.1    GAIX01005536    JAA87024.1    KQ435090    KZC14596.1    LJIG01022707    KRT79133.1    APGK01051866    KB741207    ENN72903.1    KB632327    ERL92520.1    KQ971343    EFA04238.1    GL441645    EFN64488.1    LBMM01002572    KMQ94643.1    NEVH01006564    PNF38020.1    GEZM01012955    GEZM01012954    JAV92853.1    KQ435784    KOX74560.1    DS231863    EDS39996.1    NNAY01001260    OXU24581.1    KQ978350    KYM94730.1    GFDL01014488    JAV20557.1    KK107293    QOIP01000005    EZA53311.1    RLU22944.1    KZ288204    PBC33312.1    KQ761343    OAD57878.1    GL888041    EGI68920.1    KQ979763    KYN19287.1    ADTU01015915    ADTU01015916    CH478033    EAT34275.1    GL446384    EFN87882.1    KQ983167    KYQ46949.1    KQ976737    KYM75961.1    GECL01001987    JAP04137.1    JH819089    EKC28841.1    DS235465    EEB15949.1    GECU01026569    JAS81137.1    LJIJ01000094    ODN02846.1    GEDC01002278    JAS35020.1    GECZ01021912    JAS47857.1    CM002910    KMY90241.1    CM000157    EDW88998.1    AE014134    AY051935    AAF53389.1    AAK93359.1    CH480818    EDW51744.1    JRES01001125    KNC25305.1    AADN05000843    JW862296    AFO94813.1    CP012523    ALC39941.1    CH902620    EDV30758.1    CH916368    EDW03633.1    AJVK01007133    CH963913    EDW77390.1    MUZQ01000014    OWK63336.1    CVRI01000055    CRL01322.1    CM004474    OCT81229.1    CH940654    EDW57601.1    BC043816    BC056086    KZ505948    PKU42919.1    IACJ01037920    LAA40538.1    LSYS01006902    OPJ73565.1    AKCR02000002    PKK32993.1    GBSH01001835    JAG67191.1    KL217498    KFO95891.1    IACN01108752    LAB64156.1    IACL01068707    LAB09160.1    CH379061    EAL33258.1    CH933807    EDW11864.1    OUUW01000006    SPP82477.1    CH479195    EDW27399.1    JU175279    AFJ50803.1    ADON01036004    ADON01036005    GBEX01002294    JAI12266.1    ABGA01231989    ABGA01231990    ABGA01231991    ABGA01231992    ABGA01231993    ABGA01231994    ABGA01231995    ABGA01231996    ABGA01231997    ABGA01231998    NDHI03003434    PNJ52275.1    GAAZ01001659    JAA96284.1    DS469639    EDO37775.1    GDHF01028709    JAI23605.1    CYRY02002147    VCW66807.1    ABQF01001314    ABQF01001315    ABQF01001316    GBXI01010895    JAD03397.1    AYCK01001308    HAAF01001104    CCP72930.1    CM000361    EDX05033.1    GAKP01008921    JAC50031.1    UFQS01000547    UFQT01000547    SSX04784.1    SSX25147.1    LSMT01000040    PFX31110.1    GAMC01003357    GAMC01003356    JAC03199.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000076502    UP000019118    UP000030742    + More
UP000007266    UP000000311    UP000036403    UP000235965    UP000053105    UP000002320    UP000215335    UP000078542    UP000002358    UP000005203    UP000053097    UP000279307    UP000242457    UP000007755    UP000078492    UP000005205    UP000008820    UP000008237    UP000075809    UP000078540    UP000005408    UP000009046    UP000094527    UP000095301    UP000001646    UP000095300    UP000002282    UP000000803    UP000001292    UP000037069    UP000000539    UP000092553    UP000007801    UP000001070    UP000092462    UP000007798    UP000197619    UP000183832    UP000001645    UP000186698    UP000008792    UP000190648    UP000053872    UP000054308    UP000001819    UP000009192    UP000268350    UP000008744    UP000016666    UP000001595    UP000085678    UP000265180    UP000001593    UP000007754    UP000261480    UP000028760    UP000261500    UP000248481    UP000189705    UP000000304    UP000248482    UP000225706   

PRIDE

Q9V3P2    E1BXP3    Q7T0Q5   

Pfam

PF08159   NUC153        + More
PF08675   RNA_bind
PF04857   CAF1
PF00400   WD40
PF01871   AMMECR1

Interpro

IPR012580   NUC153        + More
IPR040382   NOL10/Enp2       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR011045   N2O_reductase_N       
IPR001374   R3H_dom       
IPR035979   RBD_domain_sf       
IPR006941   RNase_CAF1       
IPR012337   RNaseH-like_sf       
IPR014789   PolyA-riboNase_RNA_binding       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR036397   RNaseH_sf       
IPR036867   R3H_dom_sf       
IPR027485   AMMECR1_N       
IPR002733   AMMECR1_domain       
IPR036071   AMMECR1_dom_sf       
IPR023473   AMMECR1       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50974   SSF50974       
SSF53098   SSF53098       
SSF82708   SSF82708       
SSF54928   SSF54928       
SSF143447   SSF143447       

Gene 3D

2.130.10.10     3.30.1370.50     3.30.420.10     3.30.70.330     3.30.700.20    

ProteinModelPortal

A0A2A4JP21   A0A1E1VZW3   A0A194RC14   A0A2W1BUQ5   A0A194PK61   S4P9D9   + More
A0A154PRQ7   A0A0T6AW88   N6T5F3   U4UR33   D6WM93   E2AQ01   A0A0J7KWI0   A0A2J7RB14   A0A1Y1N4N5   A0A0M8ZZZ3   B0W9D7   A0A232F1I7   A0A195C2B6   A0A1Q3EZ28   K7IQ04   A0A087ZP40   A0A026WCB1   A0A2A3EPW5   A0A310SQD3   F4WA64   A0A195E2Z8   A0A158NHK7   A0A1S4FZG8   Q16J33   E2B8U2   A0A151WGI3   A0A195AUV9   A0A0V0G8A4   K1R4I9   E0VRE3   A0A1B6I2H7   A0A1D2NCY1   A0A1I8MKS0   A0A1B6EAU7   G1KMW7   A0A1B6FCC2   A0A1I8PFB3   A0A0J9R2B7   B4P0K4   Q9V3P2   B4HXG4   A0A0L0BZ62   E1BXP3   V9KAD6   A0A0M4E2Q1   B3MLN7   B4JEB3   A0A1B0DMT6   B4MZB7   A0A218VBM6   A0A1J1INK9   G1NMK8   A0A1L8GBC6   B4M8S5   Q7T0Q5   A0A2I0UA43   A0A2D4EZ70   A0A1V4JNF0   A0A2I0MTI9   A0A0B8RU73   A0A091HJA4   A0A2D4Q3R9   A0A2D4KKC6   Q29KB7   B4KEI5   A0A3B0JJD8   B4GX72   J3S971   U3IR06   A0A0F7Z6T7   H2P6Z0   A0A1S3H7K4   A0A3P9MDA6   T1DA29   A7SEV8   A0A0K8UB80   A0A3P4LVB5   H0ZS45   A0A0A1WX37   A0A3B3XW02   A0A087XVJ5   A0A3B3V0Q5   U6CQM7   A0A2Y9HUF6   A0A1U7RX59   B4Q5I9   A0A034W360   A0A3P9L1P5   A0A2Y9K6G5   A0A336M9U5   U3IR03   A0A2B4SQF4   W8C1Y9  

PDB

5WLC     E-value=7.77836e-104,     Score=966

KEGG

101735555    K14788 ribosome biogenesis protein ENP2 | (RefSeq) nucleolar protein 10

GO

GO:0005634   GO:0016021   GO:0005730   GO:0032040   GO:0000462   GO:0046872   GO:0006402   GO:0005737   GO:0004535   GO:0003723   GO:0005515   GO:0008352   GO:0051013   GO:0008168   GO:0016876   GO:0043039   GO:0004651  

PANTHER

PTHR14927  

Subcellular location

  

Length:

664

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01295

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00221

outside

1  -  664

 

 

Pi

19.750037

Theta

23.59782

Tajima's D

0.374524

CLR

0.543379

CSRT

0.484025798710065

Interpretation

Uncertain