Gene

KWMTBOMO01960

Pre Gene Modal

BGIBMGA001342

Annotation

PREDICTED:_protein_brother-like_[Papilio_xuthus]

Location

Bomo_Chr4(+):8795042-8804170      View in EpiBrowser

Full name

Protein big brother      

Transcription factor

CBF

Location in the cell

Nuclear   Reliability : 1.056 PlasmaMembrane   Reliability : 1.53

CDS

ATGCCACGTGTAGTGCCCGATCAAAAAGCCAAATTCGAATCAGACGATCTCTTCAAAAGACTTAGCAGAGAAAGTGAGGTTAGATACACTGGATACCGAGACCGGCCTCCCGAAGAACGCCAGATGCGATTCATGAGCGGTTGCCGCGAGGGACACACGGAGATAGCGTTTACCGGTACCGGCACAAACCTTCAGCTTGTCTTCGATCACTCACCCTACAACAACCGTGGCTGCGACTTTCAAAAGGAAAATGGAAAAGCTCACATCGTATCCCGATTCATCATGAACGGTGTTTGTGTAAGATGGAGAGGTTGGATCGATCTGGAACGGCTCGATGGCGCCGGCTGTCTTGAGCTGGACGAGGAGAGAGCAGCGATTGAAGATGCAGCATTACGTGATCAGATCGAGAGGTACAATCAACGACTACGTGATTTTGAAGACAAGCAGCGGGCATACCGCGAACACGGGGAAGAGCTACGTTCACACTCCCACGTGCATGCCCAACGTTGCCACCAGCCGCGTCAGCCTCCACACGCCACCCATCCGACACATCCACACCCCCCACACCCACTGCATATTAAACCTCATTCACAGGGAGCTCTAATATCTTAA

Protein

MPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFMSGCREGHTEIAFTGTGTNLQLVFDHSPYNNRGCDFQKENGKAHIVSRFIMNGVCVRWRGWIDLERLDGAGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRSHSHVHAQRCHQPRQPPHATHPTHPHPPHPLHIKPHSQGALIS

Similarity

Belongs to the CBF-beta family.

Keywords

Complete proteome   Nucleus   Reference proteome  

Feature

chain  Protein big brother

Uniprot

H9IVR1   A0A0L7LVJ1   A0A212FH96   A0A2W1C3P8   A0A2H1WKU0   A0A2A4JU14   + More
A0A194RC19   A0A194PK66   A0A0A9YTZ4   A0A067RHV0   A0A023F594   A0A1B6CC91   F4W8K4   A0A195EIT1   A0A195BAT4   A0A158NKA4   A0A151WIS2   A0A1W4X255   A0A1W4WSI3   A0A1Y1LCZ7   E2BIL2   A0A087UT10   D6WK18   A0A139WHZ7   A0A1S3D275   A0A088A1Q2   A0A1B6EJG4   A0A1S3D271   A0A2A3EM14   A0A1B6HE40   A0A1B6M3V8   A0A1E1XML7   A0A1E1X284   B4J1W9   A0A293N708   A0A1W4W6S5   B4NSZ5   B4HVW7   Q24040   T1PIS4   A0A0M3QW93   A0A3B0J535   Q29DZ7   B4H454   B4N707   M9PGT9   B4PDQ5   B3NES2   A0A0J9RLU3   B4LBT4   B4L979   B3M7S4   A0A0L0BM53   A0A1B0FM96   A0A1A9XFL2   A0A1A9VVX0   A0A1B0BXT7   A0A1A9Z3R9   A0A1A9WRX6   D3TKJ2   A0A0L7R5K7   A0A1I8PVY7   B4N715   A0A3L8DAB3   A0A026WU33   A0A1I8PIH0   A0A034W391   A0A0A1X6V1   W8BM20   T1JHP7   A0A0P6CM72   E9GU54   A0A182QJH0   A0A182JGA9   A0A182Y4T0   A0A182FJ60   A0A182XBU5   Q7QF59   A0A182IAP1   A0A336MM43   A0A336MZ78   A0A2S2NUE3   A0A2S2Q724   Q178N2   A0A023EKE1   A0A0C9PLF5   A0A2H8TEK9   T1IRZ8   J9JXX5   A0A1Q3FQE6   B0XI71   A0A154P4T5   J9K1F7   A0A2H8TWN8   A0A2S2NV63   A0A2S2RAB5   V4A2E1   A0A1V0QB21   A0A1V0QB13   A0A2T7NGN6  

Pubmed

19121390    26227816    22118469    28756777    26354079    25401762    + More
26823975    24845553    25474469    21719571    21347285    28004739    20798317    18362917    19820115    29209593    28503490    17994087    8622696    10731132    12537572    12537569    25315136    15632085    12537568    12537573    12537574    16110336    17569856    17569867    17550304    22936249    26108605    20353571    30249741    24508170    25348373    25830018    24495485    21292972    25244985    12364791    14747013    17210077    17510324    24945155    26483478    23254933   

EMBL

BABH01042427    BABH01042428    JTDY01000001    KOB79533.1    AGBW02008527    OWR53087.1    + More
KZ149895    PZC78783.1    ODYU01009315    SOQ53648.1    NWSH01000672    PCG74900.1    KQ460398    KPJ15147.1    KQ459601    KPI93831.1    GBHO01007965    GDHC01008520    JAG35639.1    JAQ10109.1    KK852498    KDR22598.1    GBBI01002453    JAC16259.1    GEDC01026232    GEDC01003360    JAS11066.1    JAS33938.1    GL887908    EGI69495.1    KQ978881    KYN27769.1    KQ976537    KYM81330.1    ADTU01018757    KQ983082    KYQ47726.1    GEZM01061128    JAV70761.1    GL448516    EFN84459.1    KK121459    KFM80499.1    KQ971342    EFA03630.2    KYB27618.1    GECZ01031738    JAS38031.1    KZ288215    PBC32758.1    GECU01034709    JAS72997.1    GEBQ01009387    JAT30590.1    GFAA01002926    JAU00509.1    GFAC01005821    JAT93367.1    CH916366    EDV95894.1    GFWV01023492    MAA48219.1    CH982512    EDX15685.1    CH480817    EDW50082.1    U22177    AE014296    AY058784    KA648671    AFP63300.1    CP012525    ALC43743.1    OUUW01000002    SPP76725.1    CH379070    EAL30266.1    CH479208    EDW31169.1    CH964168    EDW80146.1    AGB93966.1    CM000159    EDW92870.2    CH954178    EDV50195.2    CM002912    KMY96898.1    CH940647    EDW68711.2    CH933816    EDW17254.2    CH902618    EDV38797.2    JRES01001646    KNC21205.1    CCAG010013603    JXJN01022368    EZ421924    EZ422543    ADD18220.1    ADD18819.1    KQ414652    KOC66128.1    EDW80154.1    QOIP01000011    RLU17276.1    KK107105    EZA59537.1    GAKP01010190    JAC48762.1    GBXI01007243    JAD07049.1    GAMC01015851    JAB90704.1    JH431407    GDIQ01089194    GDIQ01040087    LRGB01002384    JAN05543.1    KZS07960.1    GL732565    EFX77033.1    AXCN02001428    AAAB01008846    EAA06195.3    APCN01001292    UFQS01001663    UFQT01001663    SSX11781.1    SSX31346.1    UFQS01002565    UFQT01002565    SSX14272.1    SSX33687.1    GGMR01008166    MBY20785.1    GGMS01004167    MBY73370.1    CH477361    EAT42658.1    JXUM01031286    JXUM01031287    JXUM01061807    JXUM01061808    JXUM01061809    GAPW01003980    KQ562169    KQ560917    JAC09618.1    KXJ76521.1    KXJ80358.1    GBYB01001888    JAG71655.1    GFXV01000716    MBW12521.1    ABLF02013825    ABLF02033147    GFDL01005216    JAV29829.1    DS233269    EDS29029.1    KQ434819    KZC06936.1    ABLF02033148    GFXV01006898    MBW18703.1    GGMR01008482    MBY21101.1    GGMS01017407    MBY86610.1    KB202325    ESO90827.1    KY056583    ARE59197.1    KY056584    ARE59198.1    PZQS01000012    PVD20330.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000218220    UP000053240    UP000053268    + More
UP000027135    UP000007755    UP000078492    UP000078540    UP000005205    UP000075809    UP000192223    UP000008237    UP000054359    UP000007266    UP000079169    UP000005203    UP000242457    UP000001070    UP000192221    UP000000304    UP000001292    UP000000803    UP000095301    UP000092553    UP000268350    UP000001819    UP000008744    UP000007798    UP000002282    UP000008711    UP000008792    UP000009192    UP000007801    UP000037069    UP000092444    UP000092443    UP000078200    UP000092460    UP000092445    UP000091820    UP000053825    UP000095300    UP000279307    UP000053097    UP000076858    UP000000305    UP000075886    UP000075880    UP000076408    UP000069272    UP000076407    UP000007062    UP000075840    UP000008820    UP000069940    UP000249989    UP000007819    UP000002320    UP000076502    UP000030746    UP000245119   

PRIDE

H9IVR1    Q24040   

Pfam

PF02312   CBF_beta

Interpro

IPR003417   CBF_beta        + More
IPR036552   CBF_bsu_sf       

SUPFAM

SSF50723   SSF50723       

Gene 3D

2.40.250.10    

ProteinModelPortal

H9IVR1   A0A0L7LVJ1   A0A212FH96   A0A2W1C3P8   A0A2H1WKU0   A0A2A4JU14   + More
A0A194RC19   A0A194PK66   A0A0A9YTZ4   A0A067RHV0   A0A023F594   A0A1B6CC91   F4W8K4   A0A195EIT1   A0A195BAT4   A0A158NKA4   A0A151WIS2   A0A1W4X255   A0A1W4WSI3   A0A1Y1LCZ7   E2BIL2   A0A087UT10   D6WK18   A0A139WHZ7   A0A1S3D275   A0A088A1Q2   A0A1B6EJG4   A0A1S3D271   A0A2A3EM14   A0A1B6HE40   A0A1B6M3V8   A0A1E1XML7   A0A1E1X284   B4J1W9   A0A293N708   A0A1W4W6S5   B4NSZ5   B4HVW7   Q24040   T1PIS4   A0A0M3QW93   A0A3B0J535   Q29DZ7   B4H454   B4N707   M9PGT9   B4PDQ5   B3NES2   A0A0J9RLU3   B4LBT4   B4L979   B3M7S4   A0A0L0BM53   A0A1B0FM96   A0A1A9XFL2   A0A1A9VVX0   A0A1B0BXT7   A0A1A9Z3R9   A0A1A9WRX6   D3TKJ2   A0A0L7R5K7   A0A1I8PVY7   B4N715   A0A3L8DAB3   A0A026WU33   A0A1I8PIH0   A0A034W391   A0A0A1X6V1   W8BM20   T1JHP7   A0A0P6CM72   E9GU54   A0A182QJH0   A0A182JGA9   A0A182Y4T0   A0A182FJ60   A0A182XBU5   Q7QF59   A0A182IAP1   A0A336MM43   A0A336MZ78   A0A2S2NUE3   A0A2S2Q724   Q178N2   A0A023EKE1   A0A0C9PLF5   A0A2H8TEK9   T1IRZ8   J9JXX5   A0A1Q3FQE6   B0XI71   A0A154P4T5   J9K1F7   A0A2H8TWN8   A0A2S2NV63   A0A2S2RAB5   V4A2E1   A0A1V0QB21   A0A1V0QB13   A0A2T7NGN6  

PDB

4N9F     E-value=8.61523e-40,     Score=407

KEGG

101740476    no KO assigned | (RefSeq) protein big brother-like

GO

GO:0003713   GO:0005634   GO:0003712   GO:0003677   GO:0016513   GO:0008134   GO:0006357   GO:0046982   GO:0035206   GO:0017150   GO:0050660   GO:0008168   GO:0005737   GO:0016876   GO:0043039   GO:0004651  

PANTHER

PTHR10276  

Subcellular location

Nucleus  

Length:

203

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00626

Exp number, first 60 AAs:

0.00079

Total prob of N-in:

0.11413

outside

1  -  203

 

 

Pi

247.454007

Theta

176.257436

Tajima's D

0.804529

CLR

0.032589

CSRT

0.603469826508675

Interpretation

Uncertain