Gene

KWMTBOMO01952

Annotation

PREDICTED:_actin-related_protein_2/3_complex_subunit_5_[Papilio_xuthus]

Location

Bomo_Chr4(-):8492957-8495167      View in EpiBrowser

Full name

Actin-related protein 2/3 complex subunit 5      

Location in the cell

Extracellular   Reliability : 2.034

CDS

ATGGCAAAAAATACTTTAAGCTCAGCATTCCGGAAAATAGACATAGATCAATACAATGAAGACAACTTCAAAGAAGACGAAGCAGAACAAGCCGGCCCTACTGGACCAGATGAAGGCGAAGTGTGTTCGTTGTTAAATCAAGGCAGACATATTGATGCACTCAAGCTAGTGTTAAATAATGCTCCACTTGGATCATCTAATCAACAGGTAAAGGAAAACGCATTAACTCTGACTTTGAAGGTGTTGCTTGCAATCAAATCTGCACAAATAGAGGAAGCAGTTGGAAGTTTGTCTTTAGATGATATAGATAATCTTATGAAGTATATCTATAAAGGTTTTGAATTTCCATCAGAGGGTTCAAGTGGCCATCTGTTGTTATGGCATGATAAAGCATACAGTGTAGGTGGTCTTGGTTGTATAGCAAGAGTTCTTTCAGACAGAATGAGAGTGTAA

Protein

MAKNTLSSAFRKIDIDQYNEDNFKEDEAEQAGPTGPDEGEVCSLLNQGRHIDALKLVLNNAPLGSSNQQVKENALTLTLKVLLAIKSAQIEEAVGSLSLDDIDNLMKYIYKGFEFPSEGSSGHLLLWHDKAYSVGGLGCIARVLSDRMRV

Description

Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.

Similarity

Belongs to the ARPC5 family.

Uniprot

X4YSR2   S4PSD7   A0A2A4K3E4   A0A1E1WC57   A0A2W1BYS1   A0A194RCF7   + More
A0A212ETV3   D6WJE2   A0A2P8YGY4   A0A1Y1LRR7   A0A2J7QPE2   H9J8T0   A0A067QXV4   A0A1B6GNU7   A0A1B6MMA5   A0A1B6C4F2   J3JZI1   A0A0K8TT87   A0A1W4WYI6   A0A0K8RL91   E9FWA9   Q16WY4   A0A023EH24   Q06DG1   A0A023NKT7   A0A1S3D007   A0A023FEE3   A0A023FWL2   A0A1S4GZI4   A0A182I793   A0A0P6EI95   A0A131XPY0   A0A1E1WZ40   T1E889   A0A2M4CTL7   A0A2M3Z752   A0A2M4ALG5   A0A2M4C312   A0A0P6EM95   A0A0P6B477   A0A2M4C262   A0A023FGT2   A0A023GHK9   A0A0P5MRK8   A0A1A9V887   A0A1A9XEP7   A0A1B0C0M9   A0A1A9Z7V9   D3TQE4   A0A224Y010   A0A0P4VSN7   A0A023F9K7   A0A069DPE4   R4FL54   A0A1B0DE32   A0A1Q3FYH8   A0A1A9WKK5   A0A0K8VDG9   A0A034WU90   A0A0C9PY04   A0A2R5LIF7   A0A182P896   W8BZL3   A0A182JMC2   A0A1D2N991   L7M3J1   A0A0P5J589   A0A224YIQ8   A0A131YHB7   B4JDB9   A0A1L8E5G9   A0A0A9XR81   A0A0M4EH08   A0A293MRH5   A0A1B0GJH2   B4N0E3   A0A0L0CMS0   A0A0V0G767   B4KL36   Q9VQD8   A0A1W4UTV1   B3N1Y1   B7PCP7   E0VEQ7   A0A3B0JHQ8   Q29KY0   A0A087TMW3   B4NWR8   A0A0M3QT04   B4I2M4   B4Q8H1   B0X003   B3NA30   A0A084VYP9   A0A336KR97   A0A2H1WR56   B4LUR9   A0A0L7LN81   A0A1I8PTV9   J9JPQ6  

Pubmed

23622113    28756777    26354079    22118469    18362917    19820115    + More
29403074    28004739    19121390    24845553    22516182    26369729    21292972    17510324    24945155    26483478    17244545    24733187    12364791    28049606    28503490    20353571    27129103    25474469    26334808    25348373    24495485    27289101    25576852    28797301    26830274    17994087    25401762    26823975    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20566863    15632085    17550304    22936249    24438588    26227816   

EMBL

KJ187402    AHV90277.1    GAIX01000020    JAA92540.1    NWSH01000172    PCG78781.1    + More
GDQN01006537    JAT84517.1    KZ149895    PZC78795.1    KQ460398    KPJ15154.1    AGBW02012530    OWR44897.1    KQ971342    EFA03688.2    PYGN01000608    PSN43434.1    GEZM01052813    JAV74266.1    NEVH01012093    PNF30457.1    BABH01005095    BABH01005096    KK852846    KDR15108.1    GECZ01005667    JAS64102.1    GEBQ01021342    GEBQ01002903    JAT18635.1    JAT37074.1    GEDC01029109    JAS08189.1    BT128663    AEE63620.1    GDAI01000031    JAI17572.1    GADI01001946    JAA71862.1    GL732526    EFX87860.1    CH477551    EAT39104.1    JXUM01118365    GAPW01005447    GAPW01005446    KQ566177    JAC08151.1    KXJ70340.1    DQ910364    ABI83786.1    KF780490    AHX02954.1    GBBK01004126    JAC20356.1    GBBL01002202    JAC25118.1    AAAB01008984    APCN01003371    GDIQ01069128    JAN25609.1    GEFH01000159    JAP68422.1    GFAC01006903    JAT92285.1    GAMD01002983    JAA98607.1    GGFL01004482    MBW68660.1    GGFM01003583    MBW24334.1    GGFK01008299    MBW41620.1    GGFJ01010257    MBW59398.1    GDIQ01246717    GDIQ01143488    GDIQ01088220    GDIQ01061578    GDIQ01042887    JAN33159.1    GDIP01021538    JAM82177.1    GGFJ01010256    MBW59397.1    GBBK01004127    JAC20355.1    GBBM01002940    JAC32478.1    GDIQ01152997    JAK98728.1    JXJN01023698    CCAG010002037    EZ423646    ADD19922.1    GFTR01002543    JAW13883.1    GDKW01001108    JAI55487.1    GBBI01000526    JAC18186.1    GBGD01003333    JAC85556.1    ACPB03001109    GAHY01002234    JAA75276.1    AJVK01014708    GFDL01002513    JAV32532.1    GDHF01015325    JAI36989.1    GAKP01000773    JAC58179.1    GBYB01006398    JAG76165.1    GGLE01005079    MBY09205.1    GAMC01011851    JAB94704.1    LJIJ01000138    ODN01807.1    GACK01006454    JAA58580.1    GDIQ01210813    JAK40912.1    GFPF01005699    MAA16845.1    GEDV01010632    JAP77925.1    CH916368    EDW03292.1    GFDF01000168    JAV13916.1    GBHO01020362    GBHO01020361    GBRD01017813    GDHC01021686    GDHC01010347    GDHC01006475    JAG23242.1    JAG23243.1    JAG48014.1    JAP96942.1    JAQ08282.1    JAQ12154.1    CP012523    ALC40130.1    GFWV01018684    MAA43412.1    AJWK01021692    CH963920    EDW77556.1    JRES01000186    KNC33512.1    GECL01002341    JAP03783.1    CH933807    EDW12786.1    AE014134    AY089678    AAF51237.1    AAL90416.1    CH902667    EDV30591.1    ABJB010147304    ABJB010519794    ABJB010620500    DS685053    EEC04369.1    DS235093    EEB11863.1    OUUW01000006    SPP81877.1    CH379061    EAL33044.1    KK115962    KFM66452.1    CM000157    EDW87410.1    ALC38039.1    CH480820    EDW54019.1    CM000361    CM002910    EDX03488.1    KMY87695.1    DS232223    EDS37878.1    CH954177    EDV57493.1    ATLV01018386    KE525231    KFB43093.1    UFQS01000716    UFQS01000742    UFQT01000716    UFQT01000742    SSX06374.1    SSX06511.1    SSX26728.1    ODYU01010437    SOQ55549.1    CH940649    EDW64246.1    JTDY01000569    KOB76646.1    ABLF02028122    ABLF02028125   

Proteomes

UP000218220    UP000053240    UP000007151    UP000007266    UP000245037    UP000235965    + More
UP000005204    UP000027135    UP000192223    UP000000305    UP000008820    UP000069940    UP000249989    UP000079169    UP000075840    UP000078200    UP000092443    UP000092460    UP000092445    UP000092444    UP000015103    UP000092462    UP000091820    UP000075885    UP000075880    UP000094527    UP000001070    UP000092553    UP000092461    UP000007798    UP000037069    UP000009192    UP000000803    UP000192221    UP000007801    UP000001555    UP000009046    UP000268350    UP000001819    UP000054359    UP000002282    UP000001292    UP000000304    UP000002320    UP000008711    UP000030765    UP000008792    UP000037510    UP000095300    UP000007819   

PRIDE

H9J8T0    Q9VQD8    B7PCP7   

Pfam

PF04699   P16-Arc

Interpro

IPR030075   ARPC5L        + More
IPR006789   ARPC5       
IPR036743   ARPC5_sf       

SUPFAM

SSF69103   SSF69103       

Gene 3D

1.25.40.190    

ProteinModelPortal

X4YSR2   S4PSD7   A0A2A4K3E4   A0A1E1WC57   A0A2W1BYS1   A0A194RCF7   + More
A0A212ETV3   D6WJE2   A0A2P8YGY4   A0A1Y1LRR7   A0A2J7QPE2   H9J8T0   A0A067QXV4   A0A1B6GNU7   A0A1B6MMA5   A0A1B6C4F2   J3JZI1   A0A0K8TT87   A0A1W4WYI6   A0A0K8RL91   E9FWA9   Q16WY4   A0A023EH24   Q06DG1   A0A023NKT7   A0A1S3D007   A0A023FEE3   A0A023FWL2   A0A1S4GZI4   A0A182I793   A0A0P6EI95   A0A131XPY0   A0A1E1WZ40   T1E889   A0A2M4CTL7   A0A2M3Z752   A0A2M4ALG5   A0A2M4C312   A0A0P6EM95   A0A0P6B477   A0A2M4C262   A0A023FGT2   A0A023GHK9   A0A0P5MRK8   A0A1A9V887   A0A1A9XEP7   A0A1B0C0M9   A0A1A9Z7V9   D3TQE4   A0A224Y010   A0A0P4VSN7   A0A023F9K7   A0A069DPE4   R4FL54   A0A1B0DE32   A0A1Q3FYH8   A0A1A9WKK5   A0A0K8VDG9   A0A034WU90   A0A0C9PY04   A0A2R5LIF7   A0A182P896   W8BZL3   A0A182JMC2   A0A1D2N991   L7M3J1   A0A0P5J589   A0A224YIQ8   A0A131YHB7   B4JDB9   A0A1L8E5G9   A0A0A9XR81   A0A0M4EH08   A0A293MRH5   A0A1B0GJH2   B4N0E3   A0A0L0CMS0   A0A0V0G767   B4KL36   Q9VQD8   A0A1W4UTV1   B3N1Y1   B7PCP7   E0VEQ7   A0A3B0JHQ8   Q29KY0   A0A087TMW3   B4NWR8   A0A0M3QT04   B4I2M4   B4Q8H1   B0X003   B3NA30   A0A084VYP9   A0A336KR97   A0A2H1WR56   B4LUR9   A0A0L7LN81   A0A1I8PTV9   J9JPQ6  

PDB

4XF2     E-value=1.71718e-34,     Score=359

KEGG

101743942    K05754 actin related protein 2/3 complex, subunit 5 | (RefSeq) actin-related protein 2/3 complex sub

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0034314   GO:0005885   GO:0051015   GO:0005737   GO:0016477   GO:0000902   GO:0030027   GO:0030833   GO:0003779   GO:0005200   GO:0015629   GO:0006480   GO:0008168   GO:0016876   GO:0043039   GO:0004651   GO:0005634  

PANTHER

PTHR12644   PTHR12644:SF2  

Length:

150

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06044

Exp number, first 60 AAs:

0

Total prob of N-in:

0.20371

outside

1  -  150

 

 

Pi

224.949068

Theta

188.012394

Tajima's D

0.600881

CLR

0.370777

CSRT

0.541722913854307

Interpretation

Uncertain