SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01951
Pre Gene Modal
BGIBMGA005923
Annotation
uncharacterized_protein_LOC106127624_precursor_[Papilio_xuthus]
Full name
Actin-related protein 2/3 complex subunit 5      
Location in the cell
PlasmaMembrane   Reliability : 2.507
 

Sequence

CDS
ATGGTTCTGCTGTGTTACATATGGTGCGCTTTCGCATCTCATCATTCACATACTATCCCTGTGGAAGGTTATGAGACAGAACTACAAGACCTTGGACAACATGTTGAAATACCAGAAACGCCGGTGAAAGTGATCAAAATTACAAAGACAATTGCTGTTAAAATTCCAGTGCCTTATCCAGTGAAAATAAAGGAAAGGGTGCCTTATCCAGTGCACGTCGCTAAACCATACCCCGTTCCTGTACCGCAAATTATTAAAGTTCCACATATTGTAACACCGGGGAATGGACATAACAGTCATGAAGCATCGGAAGATGGTGTACAAAATAATTCCTATAATGTTCAAGAAAATCATGAACCATCTGATGGTGGGCAGTCGTATAGGCCTACGTCAAATATTCACTCCTTTGAAGGCAGCCCCAGTTATAGTCAAGATGCAGCCCAATTTAGTGAAGAATATGCAGGGACGCCGTCTGGGTATAACGCTCCAACATATAGCAATTACGGTAATTCTGGAAACGGTGATAATACTTTTGAACATAACCAATACGAGCAACTGAGAGACTTCCTCCCTCACAATCAAGGCGCCGCGCATTCGGACGGAGGAAATAGTTATTACCATTAG
Protein
MVLLCYIWCAFASHHSHTIPVEGYETELQDLGQHVEIPETPVKVIKITKTIAVKIPVPYPVKIKERVPYPVHVAKPYPVPVPQIIKVPHIVTPGNGHNSHEASEDGVQNNSYNVQENHEPSDGGQSYRPTSNIHSFEGSPSYSQDAAQFSEEYAGTPSGYNAPTYSNYGNSGNGDNTFEHNQYEQLRDFLPHNQGAAHSDGGNSYYH

Summary

Description
Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Arp2/3 complex plays a critical role in the control of cell morphogenesis via the modulation of cell polarity development.
Similarity
Belongs to the ARPC5 family.
Pfam
PF04699   P16-Arc
Interpro
IPR030075   ARPC5L        + More
IPR036743   ARPC5_sf       
IPR006789   ARPC5       
SUPFAM
SSF69103   SSF69103       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.848188
 
 
Length:
207
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01185
Exp number, first 60 AAs:
0.01185
Total prob of N-in:
0.05707
outside
1  -  207
 
 

Population Genetic Test Statistics

Pi
269.595823
Theta
198.260105
Tajima's D
1.357313
CLR
0
CSRT
0.752112394380281
Interpretation
Uncertain
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