Gene

KWMTBOMO01945

Pre Gene Modal

BGIBMGA006224

Annotation

PREDICTED:_transmembrane_protein_189_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr4(+):8365158-8377905      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.578

CDS

ATGGCTTTGCCGTTACCCATATCGCCTTGTGCTAAAAGAGGGGACGGTATCAGTGCTTTGGGCTGCGAGCGATTCGAATACGCAAGCACTATGGCCACAACCCTGTTAGCGCCGGTTAAAACTGAACGTGAGATCCTAGAGCATTCGATGTCGGAAGATGATCCTAACGCAAATACACAATTATCAAGTCAAGTTGGAACCCAACCACGTTGGGGTCCAAGGCATAAAGGCGCACAAGAACTTGCTGAATTGTATAGTCCAGGCAAGCGATTGCAGGAATGGGTATGTGTGGTATTATGTTGCACACTATGTGCCTCTGCCGGAATTTTAATGATCAGATATGTTCGGGCTGATGCTTCACTGGTACTGGCAGCTCTTGCAGGGGTCTTAACAGCAGATTTTGCTTCTGGAGTTGTGCACTGGGCAGCTGACACTTGGGGAGCAGTTGATCTACCAATAATAGGCAAAAACTTTCTCCGACCATTTCGAGAGCACCACATCGATCCTACATCAATCACCCGTCATGACTTTATTGAGACCAATGGTGATAATTTTGCTATAACGATACCTGTACTTGCACGAATAGTATGGCAACTAGTTACGTACGAAGAAGGAAAAGTACATGACCAATTTCATTGGATTGCATATTGGTATTTGTGCTGTATATTCGTGGCTATGACGAATCAGATTCACAAATGGTCGCACACATATTTTGGGTTGCCATCATGGGTGGTGTGGTTACAAGAGTGGCACATTGTGCTGCCTCGTCGCCATCATCGTATACATCACGTCGCACCGCACGAGACTTACTTTTGTATAACCACTGGCTGGCTTAACTGGCCATTAGAAAAACTTCACTTTTGGTCGACTTTAGAGACAATAATAGAAGCTGTAACTGGATGTAGACCACGAGCAGACGACCTTAAATGGGCACAAAAACGTTCCTAG

Protein

MALPLPISPCAKRGDGISALGCERFEYASTMATTLLAPVKTEREILEHSMSEDDPNANTQLSSQVGTQPRWGPRHKGAQELAELYSPGKRLQEWVCVVLCCTLCASAGILMIRYVRADASLVLAALAGVLTADFASGVVHWAADTWGAVDLPIIGKNFLRPFREHHIDPTSITRHDFIETNGDNFAITIPVLARIVWQLVTYEEGKVHDQFHWIAYWYLCCIFVAMTNQIHKWSHTYFGLPSWVVWLQEWHIVLPRRHHRIHHVAPHETYFCITTGWLNWPLEKLHFWSTLETIIEAVTGCRPRADDLKWAQKRS

Uniprot

H9J9N1   A0A194RBF5   A0A194PRT1   A0A212ETS7   A0A2A4K4E1   A0A2A4K3Y8   + More
A0A1Y1K217   A0A0L7LKH0   A0A0M8ZWY6   D6WJA6   A0A0J7NU39   E2AH55   E2C362   A0A2J7Q1N1   A0A026VVG2   A0A195FSP9   A0A2A3E7K3   A0A087ZV95   A0A195BKH0   A0A158NA45   A0A195DLN9   A0A195CWD2   A0A067QNV2   E9IXM8   F4X1E9   A0A151WWN7   A0A2P8XU89   A0A232EYF6   N6UB96   A0A182WGF5   A0A182Q206   A0A1B6D822   A0A182IQS6   A0A182MGV5   A0A1L8DSG0   A0A182F109   A0A182VDV7   A0A2W1C1G0   A0A182Y0K5   A0A1B6L8T3   A0A182LMA1   A0A336LYN7   A0A182NBN0   A0A182K6I3   W5J8I9   A0A1B6JK45   A0A0P4WH69   A0A0L7RG65   Q7Q1N6   A0A1I8NX02   A0A1I8MLN3   A0A034VBB6   A0A0K8WKU9   A0A0K8U0E0   A0A0L0C4V2   A0A0A1X1N5   K7IQQ7   A0A0A1WP99   A0A1J1ISL8   Q17LY2   A0A1S4EY35   A0A224ZBF3   A0A1A9UEY2   L7ME04   A0A1A9YF93   A0A1B0AH72   A0A1B0BX05   V5H9R1   A0A084WU94   A0A1A9WHG1   A0A2R5LK94   A0A293M839   W8BD85   W8C0T1   A0A182XFS8   A0A182HI63   A0A2P2I5P8   B4KEW2   A0A210PT33   A0A0R3NUI4   A0A0P8XFI4   B4GT61   B3MKV7   A0A3B0KCN5   Q29KL3   B4JQ98   A0A023F5Y2   A0A1W4VXW3   T1HYC9   B4M9M6   B4PBI3   B4I639   B4QAH5   K1P739   Q9V3B5   B3NKZ8   B4N7R2   A0A146LSV0   A0A0K8SDX3   A0A0A9W1H0  

Pubmed

19121390    26354079    22118469    28004739    26227816    18362917    + More
19820115    20798317    24508170    30249741    21347285    24845553    21282665    21719571    29403074    28648823    23537049    28756777    25244985    20966253    20920257    23761445    12364791    25315136    25348373    26108605    25830018    20075255    17510324    28797301    25576852    25765539    24438588    24495485    17994087    18057021    28812685    15632085    23185243    25474469    17550304    22936249    22992520    11076860    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26823975    25401762   

EMBL

BABH01005081    BABH01005082    KQ460398    KPJ15163.1    KQ459601    KPI93845.1    + More
AGBW02012530    OWR44905.1    NWSH01000172    PCG78778.1    PCG78779.1    GEZM01099226    JAV53426.1    JTDY01000738    KOB76053.1    KQ435830    KOX71746.1    KQ971343    EFA03149.1    LBMM01001664    KMQ95925.1    GL439483    EFN67172.1    GL452292    EFN77594.1    NEVH01019394    PNF22491.1    KK107796    QOIP01000013    EZA47625.1    RLU15229.1    KQ981305    KYN42929.1    KZ288348    PBC27484.1    KQ976455    KYM85110.1    ADTU01009965    KQ980734    KYN13793.1    KQ977276    KYN04464.1    KK853129    KDR10990.1    GL766762    EFZ14650.1    GL888529    EGI59744.1    KQ982686    KYQ52324.1    PYGN01001356    PSN35464.1    NNAY01001691    OXU23208.1    APGK01041724    KB740996    ENN75912.1    AXCN02000679    GEDC01015464    GEDC01011651    GEDC01011073    GEDC01006853    JAS21834.1    JAS25647.1    JAS26225.1    JAS30445.1    AXCM01003195    GFDF01004705    JAV09379.1    KZ149895    PZC78806.1    GEBQ01019860    JAT20117.1    UFQS01000320    UFQT01000320    SSX02828.1    SSX23196.1    ADMH02001955    ETN60281.1    GECU01008118    JAS99588.1    GDRN01052498    JAI66292.1    KQ414598    KOC69823.1    AAAB01008980    EAA14566.3    GAKP01018362    GAKP01018360    GAKP01018356    JAC40596.1    GDHF01013454    GDHF01000541    JAI38860.1    JAI51773.1    GDHF01032554    JAI19760.1    JRES01000914    KNC27277.1    GBXI01009622    JAD04670.1    GBXI01014039    JAD00253.1    CVRI01000055    CRL01521.1    CH477210    EAT47689.1    GFPF01013084    MAA24230.1    GACK01002824    JAA62210.1    JXJN01022022    GANP01010554    JAB73914.1    ATLV01027020    KE525421    KFB53788.1    GGLE01005773    MBY09899.1    GFWV01010571    MAA35300.1    GAMC01007296    GAMC01007295    JAB99260.1    GAMC01007294    JAB99261.1    APCN01005628    IACF01003753    LAB69363.1    CH933807    EDW11931.1    KRG02975.1    KRG02976.1    KRG02977.1    NEDP02005518    OWF39657.1    CH379061    KRT04786.1    KRT04787.1    CH902620    KPU73519.1    CH479189    EDW25570.1    EDV31638.1    KPU73518.1    KPU73520.1    KPU73521.1    OUUW01000010    SPP85980.1    EAL33161.2    CH916372    EDV99078.1    GBBI01002109    JAC16603.1    ACPB03007951    CH940654    EDW57902.1    KRF78003.1    KRF78004.1    KRF78005.1    KRF78006.1    CM000158    EDW90497.1    KRJ99218.1    KRJ99219.1    CH480822    EDW55845.1    CM000361    CM002910    EDX05592.1    KMY91134.1    JH816441    EKC19452.1    AF152361    AE014134    BT029029    BT126266    AAF00151.1    AAF53878.1    ABJ16962.1    ADV37105.1    AEB39627.1    AGB93155.1    AGB93156.1    CH954179    EDV54576.1    KQS61844.1    CH964214    EDW80401.1    KRF99275.1    GDHC01008787    JAQ09842.1    GBRD01014517    JAG51309.1    GBHO01041960    GBHO01041956    JAG01644.1    JAG01648.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000218220    UP000037510    + More
UP000053105    UP000007266    UP000036403    UP000000311    UP000008237    UP000235965    UP000053097    UP000279307    UP000078541    UP000242457    UP000005203    UP000078540    UP000005205    UP000078492    UP000078542    UP000027135    UP000007755    UP000075809    UP000245037    UP000215335    UP000019118    UP000075920    UP000075886    UP000075880    UP000075883    UP000069272    UP000075903    UP000076408    UP000075882    UP000075884    UP000075881    UP000000673    UP000053825    UP000007062    UP000095300    UP000095301    UP000037069    UP000002358    UP000183832    UP000008820    UP000078200    UP000092443    UP000092445    UP000092460    UP000030765    UP000091820    UP000076407    UP000075840    UP000009192    UP000242188    UP000001819    UP000007801    UP000008744    UP000268350    UP000001070    UP000192221    UP000015103    UP000008792    UP000002282    UP000001292    UP000000304    UP000005408    UP000000803    UP000008711    UP000007798   

PRIDE

H9J9N1    Q9V3B5   

Pfam

PF10520   TMEM189_B_dmain        + More
PF00831   Ribosomal_L29

Interpro

IPR019547   TMEM189_B_dmain        + More
IPR036049   Ribosomal_L29/L35_sf       
IPR001854   Ribosomal_L29/L35       
IPR018254   Ribosomal_L29_CS       

SUPFAM

SSF46561   SSF46561       

ProteinModelPortal

H9J9N1   A0A194RBF5   A0A194PRT1   A0A212ETS7   A0A2A4K4E1   A0A2A4K3Y8   + More
A0A1Y1K217   A0A0L7LKH0   A0A0M8ZWY6   D6WJA6   A0A0J7NU39   E2AH55   E2C362   A0A2J7Q1N1   A0A026VVG2   A0A195FSP9   A0A2A3E7K3   A0A087ZV95   A0A195BKH0   A0A158NA45   A0A195DLN9   A0A195CWD2   A0A067QNV2   E9IXM8   F4X1E9   A0A151WWN7   A0A2P8XU89   A0A232EYF6   N6UB96   A0A182WGF5   A0A182Q206   A0A1B6D822   A0A182IQS6   A0A182MGV5   A0A1L8DSG0   A0A182F109   A0A182VDV7   A0A2W1C1G0   A0A182Y0K5   A0A1B6L8T3   A0A182LMA1   A0A336LYN7   A0A182NBN0   A0A182K6I3   W5J8I9   A0A1B6JK45   A0A0P4WH69   A0A0L7RG65   Q7Q1N6   A0A1I8NX02   A0A1I8MLN3   A0A034VBB6   A0A0K8WKU9   A0A0K8U0E0   A0A0L0C4V2   A0A0A1X1N5   K7IQQ7   A0A0A1WP99   A0A1J1ISL8   Q17LY2   A0A1S4EY35   A0A224ZBF3   A0A1A9UEY2   L7ME04   A0A1A9YF93   A0A1B0AH72   A0A1B0BX05   V5H9R1   A0A084WU94   A0A1A9WHG1   A0A2R5LK94   A0A293M839   W8BD85   W8C0T1   A0A182XFS8   A0A182HI63   A0A2P2I5P8   B4KEW2   A0A210PT33   A0A0R3NUI4   A0A0P8XFI4   B4GT61   B3MKV7   A0A3B0KCN5   Q29KL3   B4JQ98   A0A023F5Y2   A0A1W4VXW3   T1HYC9   B4M9M6   B4PBI3   B4I639   B4QAH5   K1P739   Q9V3B5   B3NKZ8   B4N7R2   A0A146LSV0   A0A0K8SDX3   A0A0A9W1H0  

KEGG

101743272    K20656 transmembrane protein 189 | (RefSeq) transmembrane protein 189

GO

GO:0016021   GO:0003735   GO:0005840   GO:0006412  

Length:

315

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

60.10436

Exp number, first 60 AAs:

0.0024

Total prob of N-in:

0.05690

outside

1  -  315

 

 

Pi

239.883733

Theta

180.929119

Tajima's D

1.122914

CLR

0.92663

CSRT

0.690465476726164

Interpretation

Uncertain