Silkworm Genome Informatics Database

Gene

KWMTBOMO01943

Pre Gene Modal

BGIBMGA006223

Annotation

PREDICTED:_uncharacterized_protein_LOC105842077_[Bombyx_mori]

Location

Bomo_Chr4(+):8351088-8352791 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.953 Nuclear Reliability : 3.103

CDS

ATGTCCAGATATAAACAACCAAATAAACTCGAAAAACTTGCACTAAAAAGTCTCGGCGAATGGGTGGCCGAACAAGCTCAGCATCATTTACAACCAATAACGAGCCTGTCTATGCGTGATACGAATGCTGCTCAATCACATCTTTCTAAAAGTATCAATAATTTACGGAACTATTTGGAATACAATGTTCCGTGGATGCTTCATGATTTACTAGCTGATGAGGCAATACGCGCATTGTCAGAACTATTAGAGAAAACAAAGAGTTCCTTAGGTTTTCGCGGTTGCATGGGAAAATTTGATCATTGTCAGGAGGTTGGAAAACCAGTGACATGGAAAATGCCGTAA

Protein

MSRYKQPNKLEKLALKSLGEWVAEQAQHHLQPITSLSMRDTNAAQSHLSKSINNLRNYLEYNVPWMLHDLLADEAIRALSELLEKTKSSLGFRGCMGKFDHCQEVGKPVTWKMP

Uniprot

H9J9N0 A0A2A4K3E7 A0A2H1WRF4 A0A0L7LCG0 A0A194PK81 A0A194RCG7 + More
A0A212ETX6 A0A232FJM9 A0A1B0CDD9 A0A1B0CBB6 A0A1B0DHY9 A0A1J1IY91

Pubmed

19121390 26227816 26354079 22118469 28648823

EMBL

BABH01005080 NWSH01000172 PCG78777.1 ODYU01010437 SOQ55542.1 JTDY01001786 + More
KOB72881.1 KQ459601 KPI93846.1 KQ460398 KPJ15164.1 AGBW02012530 OWR44904.1 NNAY01000110 OXU30885.1 AJWK01007723 AJWK01004996 AJVK01006082 AJVK01006083 AJVK01006084 AJVK01006085 CVRI01000061 CRL04110.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000053268 UP000053240 UP000007151 + More
UP000215335 UP000092461 UP000092462 UP000183832

PRIDE

H9J9N0

Pfam

PF08584 Ribonuc_P_40

Interpro

IPR006553   Leu-rich_rpt_Cys-con_subtyp        + More
IPR032675   LRR_dom_sf
IPR013893   RNase_P_Rpp40

Gene 3D

3.80.10.10

ProteinModelPortal

H9J9N0 A0A2A4K3E7 A0A2H1WRF4 A0A0L7LCG0 A0A194PK81 A0A194RCG7 + More
A0A212ETX6 A0A232FJM9 A0A1B0CDD9 A0A1B0CBB6 A0A1B0DHY9 A0A1J1IY91

KEGG

105842077 no KO assigned | (RefSeq) uncharacterized LOC105842077

GO

PANTHER

PTHR15396

Length:

114

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00037

Exp number, first 60 AAs:

6e-05

Total prob of N-in:

0.49788

inside

1 - 114

Pi

6.836223

Theta

8.193507

Tajima's D

-0.353855

CLR

0.808481

CSRT

0.284185790710464

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics