Gene

KWMTBOMO01941  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005928

Annotation

ribosomal_protein_L35_[Bombyx_mori]

Location

Bomo_Chr4(-):8329939-8332477      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.139

CDS

ATGGGCAAAGTGAAGTGTTCAGAATTAAGGACAAAAGATAAAAAGGAGCTATTCAAACAGCTTGAGGAGCTAAAGACAGAATTAACAAATCTTCGGGTTGCTAAAGTTACTGGTGGAGTTGCTTCTAAACTGTCCAAGATCCGTGTTGTAAGAAAAGCTATCGCACGTGTTTACATTGTGTATCACCAGAAGATGAAGGTCAATCTTAGAAACCACTACAAAAACAAGAAATACAAGCCTTTAGATTTAAGAGCCAAGAAGACCCGTGCTATGCGCAAGGCTCTTACTAAACACGAAGCAAAGATCAAGACGAGGAAAGAGATCAGAAAGAAATCTCTCTTCCCACCTAGAGTCTATGCCGTTAAAGCTTGA

Protein

MGKVKCSELRTKDKKELFKQLEELKTELTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA

Uniprot

Q5UAQ4   A0A2H1WSZ0   H9J8T6   I4DIQ1   G0ZEH7   E7DZ59   + More
A0A2A4K3Z7   Q962T0   A0A0L7LBV6   A0A1E1WH18   A0A194RC33   A0A212ETR8   S4NVN3   A0A2W1BWT7   Q6F472   D1LYN7   Q8MUR3   A0A194PRT1   A0A2R7WHI3   A0A0V0G365   R4G506   A0A224Y147   A0A069DP19   R4WCN6   A0A0X7YDS3   A0A1B6G8E4   I3VPF6   A2IAE6   A0A0A9XF72   V5GS80   A0A1D1YAC0   D1M838   Q4GXA5   A0A1W4X4L5   J3JTD2   A0A067QZV8   Q4GXA6   A0A1B6LKP7   A0A0L7RAH0   A0A154PA67   A0A2A3E3M0   A0A087ZNY9   V9IF49   B4JKI5   Q4GXA4   E0VDC1   A2I3Z9   A0A1B6CRU3   B4M807   A0A0J7KI07   E2A6K4   Q29I12   B4H4G2   A0A0U2VCG1   A0A158N9X7   B4L641   A0A310SC70   B3MRX7   K7IRD6   A0A0U2LG34   A0A0U2T634   E9JBD2   A0A1B6GQV2   A0A0K8UGT3   A0A034VCF2   A0A0C9R390   A0A1S3D462   A0A1W4VSE3   A0A195C3G4   A0A195ELK8   F4WC96   A0A0K8TPQ8   A0A026WAT8   B4R508   B4I0L8   B3NV69   B4PZC7   A0A151XJP4   A0A2P8YGR8   A0A1J1IQ35   E2BG58   A0A1A9X038   A0A1I8MX56   B4MSG6   A0A0M4EKG7   Q9W499   A0A0N0U4X5   C6SV02   Q8MT59   A0A1L8EFB5   A0A0U2LGV3   A0A1L8EF90   A0A0L0CDI2   B4JKI8   B5M0R9   A0A1I8QDD3   A0A1A9XYE8   A0A1A9UUX1   A0A1B0ASW2   A0A1A9ZLR5  

Pubmed

19121390    22651552    14668217    26227816    26354079    22118469    + More
23622113    28756777    26334808    23691247    23049752    17437641    25401762    26823975    22516182    23537049    24845553    17994087    20566863    20798317    15632085    26621068    21347285    20075255    21282665    25348373    21719571    26369729    24508170    18057021    17550304    29403074    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    23636399    26109357    26109356    26108605    19166301   

EMBL

AY769304    AAV34846.1    ODYU01010437    SOQ55544.1    BABH01005076    BABH01005077    + More
BABH01005078    AK401169    BAM17791.1    JF265055    AEL28886.1    HQ424762    ADT80706.1    NWSH01000172    PCG78789.1    AF400196    AAK92168.1    JTDY01001786    KOB72880.1    GDQN01004751    JAT86303.1    KQ460398    KPJ15162.1    AGBW02012530    OWR44902.1    GAIX01012882    JAA79678.1    KZ149895    PZC78801.1    AB180418    BAD26662.1    GU084311    ACY95344.1    AF514335    AAM53950.1    KQ459601    KPI93845.1    KK854811    PTY18969.1    GECL01003562    JAP02562.1    ACPB03001467    GAHY01000910    JAA76600.1    GFTR01002073    JAW14353.1    GBGD01003498    JAC85391.1    AK417013    BAN20228.1    KC507358    AHB12481.1    GECZ01014262    GECZ01011108    JAS55507.1    JAS58661.1    JW050238    AFK82395.1    EF179460    ABM55466.1    GBHO01026146    GBRD01000129    GDHC01013192    JAG17458.1    JAG65692.1    JAQ05437.1    GALX01005368    JAB63098.1    GDJX01016355    JAT51581.1    GU120462    ACY71312.1    AM049118    CAJ17418.1    APGK01040621    BT126488    KB740984    KB630727    KB632357    AEE61452.1    ENN76198.1    ERL83827.1    ERL93434.1    KK852846    KDR15109.1    AM049117    CAJ17417.1    GEBQ01015702    JAT24275.1    KQ414618    KOC67907.1    KQ434857    KZC08799.1    KZ288443    PBC25691.1    JR040321    JR040322    AEY59086.1    AEY59087.1    CH916370    EDW00088.1    AM049119    CAJ17419.1    DS235073    EEB11377.1    EF070502    ABM55568.1    GEDC01021355    JAS15943.1    CH940653    EDW62283.1    LBMM01007291    KMQ89874.1    GL437132    EFN70961.1    CH379064    EAL31594.1    CH479209    EDW32713.1    KT754808    ALS04642.1    ADTU01009899    CH933812    EDW05837.1    KQ771982    OAD52526.1    CH902622    EDV34532.1    KT754990    ALS04824.1    KT755111    ALS04945.1    GL771003    EFZ09868.1    GECZ01005036    JAS64733.1    GDHF01026764    JAI25550.1    GAKP01019482    JAC39470.1    GBYB01007257    JAG77024.1    KQ978292    KYM95392.1    KQ978739    KYN28764.1    GL888070    EGI68076.1    GDAI01001211    JAI16392.1    KK107320    EZA52791.1    CM000366    EDX17157.1    CH480819    EDW53049.1    CH954180    EDV45917.1    KQS29760.1    CM000162    EDX01094.1    KRK05951.1    KQ982052    KYQ60609.1    PYGN01000608    PSN43433.1    CVRI01000057    CRL02272.1    GL448115    EFN85326.1    CH963851    EDW75055.1    CP012528    ALC49891.1    AE014298    BT044105    AAF46058.2    AAN09148.1    ACH92170.1    AHN59371.1    KQ435798    KOX73308.1    BT088994    ACT88135.1    AY118364    AAM48393.1    GFDG01001418    JAV17381.1    KT755422    ALS05256.1    GFDG01001419    JAV17380.1    JRES01000520    KNC30453.1    EDW00091.1    EU930255    ACH56883.1    JXJN01003017   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000053268    + More
UP000015103    UP000192223    UP000019118    UP000030742    UP000027135    UP000053825    UP000076502    UP000242457    UP000005203    UP000001070    UP000009046    UP000008792    UP000036403    UP000000311    UP000001819    UP000008744    UP000005205    UP000009192    UP000007801    UP000002358    UP000079169    UP000192221    UP000078542    UP000078492    UP000007755    UP000053097    UP000000304    UP000001292    UP000008711    UP000002282    UP000075809    UP000245037    UP000183832    UP000008237    UP000091820    UP000095301    UP000007798    UP000092553    UP000000803    UP000053105    UP000037069    UP000095300    UP000092443    UP000078200    UP000092460    UP000092445   

PRIDE

Q5UAQ4    H9J8T6    Q9W499    C6SV02    Q8MT59   

Pfam

PF00831   Ribosomal_L29        + More
PF10520   TMEM189_B_dmain

Interpro

IPR036049   Ribosomal_L29/L35_sf        + More
IPR001854   Ribosomal_L29/L35       
IPR018254   Ribosomal_L29_CS       
IPR019547   TMEM189_B_dmain       

SUPFAM

SSF46561   SSF46561       

ProteinModelPortal

Q5UAQ4   A0A2H1WSZ0   H9J8T6   I4DIQ1   G0ZEH7   E7DZ59   + More
A0A2A4K3Z7   Q962T0   A0A0L7LBV6   A0A1E1WH18   A0A194RC33   A0A212ETR8   S4NVN3   A0A2W1BWT7   Q6F472   D1LYN7   Q8MUR3   A0A194PRT1   A0A2R7WHI3   A0A0V0G365   R4G506   A0A224Y147   A0A069DP19   R4WCN6   A0A0X7YDS3   A0A1B6G8E4   I3VPF6   A2IAE6   A0A0A9XF72   V5GS80   A0A1D1YAC0   D1M838   Q4GXA5   A0A1W4X4L5   J3JTD2   A0A067QZV8   Q4GXA6   A0A1B6LKP7   A0A0L7RAH0   A0A154PA67   A0A2A3E3M0   A0A087ZNY9   V9IF49   B4JKI5   Q4GXA4   E0VDC1   A2I3Z9   A0A1B6CRU3   B4M807   A0A0J7KI07   E2A6K4   Q29I12   B4H4G2   A0A0U2VCG1   A0A158N9X7   B4L641   A0A310SC70   B3MRX7   K7IRD6   A0A0U2LG34   A0A0U2T634   E9JBD2   A0A1B6GQV2   A0A0K8UGT3   A0A034VCF2   A0A0C9R390   A0A1S3D462   A0A1W4VSE3   A0A195C3G4   A0A195ELK8   F4WC96   A0A0K8TPQ8   A0A026WAT8   B4R508   B4I0L8   B3NV69   B4PZC7   A0A151XJP4   A0A2P8YGR8   A0A1J1IQ35   E2BG58   A0A1A9X038   A0A1I8MX56   B4MSG6   A0A0M4EKG7   Q9W499   A0A0N0U4X5   C6SV02   Q8MT59   A0A1L8EFB5   A0A0U2LGV3   A0A1L8EF90   A0A0L0CDI2   B4JKI8   B5M0R9   A0A1I8QDD3   A0A1A9XYE8   A0A1A9UUX1   A0A1B0ASW2   A0A1A9ZLR5  

PDB

4V6W     E-value=6.73367e-20,     Score=233

KEGG

692706    K02918 large subunit ribosomal protein L35e | (RefSeq) RpL35; ribosomal protein L35

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0016021   GO:0022626   GO:0002181   GO:0022625   GO:0005622   GO:0000166   GO:0005737   GO:0016876   GO:0043039   GO:0004651   GO:0005634  

Length:

123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00144

Exp number, first 60 AAs:

0.00121

Total prob of N-in:

0.34887

outside

1  -  123

 

 

Pi

350.635966

Theta

220.293354

Tajima's D

1.831156

CLR

0

CSRT

0.853957302134893

Interpretation

Uncertain