Silkworm Genome Informatics Database

Gene

KWMTBOMO01932

Pre Gene Modal

BGIBMGA006219

Annotation

PREDICTED:_UPF0184_protein_AAEL002161_[Papilio_polytes]

Location

Bomo_Chr4(+):8241844-8243361 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.891

CDS

ATGGCATGTGATAATACAAAAAATGGTGGTGAAAATGAAAATGGATCTAATAAAAACATAGAACCTCCAGAAGATGATAACAATGAAGATATAACAGAAGAGTATGAATTATTAGAATCTACATTAGATGAACTTAATTCTGCATTGGATTTCTTGGAGCGTAAAAATGATGATATTCACCAACAATTGAAAGAGCTTTTGCAATCCAATATTGCAATTAGACAAGAAATGCGTGAAGAAAATAAGGAAGTCAACAACAGTAATTGA

Protein

MACDNTKNGGENENGSNKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKEVNNSN

Uniprot

H9J9M6 A0A2H1WYQ0 A0A2A4K4F8 A0A2W1C3S2 S4P9E7 T1E3D3 + More
A0A1L8EBP1 A0A1L8EEP7 A0A0L0CL97 A0A340YK12 G5ASF6 A0A0P6JG35 A0A091E9K8 A0A0P6IB20 A0A2P8ZG11 R4WQ95 F7H6A0

Pubmed

19121390 28756777 23622113 24330624 26108605 21993625 + More
29403074 23691247 17431167

EMBL

BABH01005068 ODYU01012086 SOQ58200.1 NWSH01000193 PCG78542.1 KZ149895 + More
PZC78813.1 GAIX01009095 JAA83465.1 GALA01000465 JAA94387.1 GFDG01002757 JAV16042.1 GFDG01001631 JAV17168.1 JRES01000333 KNC32229.1 JH166728 EHA99966.1 GEBF01000273 JAO03360.1 KN122233 KFO31891.1 GDIQ01023578 JAN71159.1 PYGN01000069 PSN55434.1 AK417866 BAN21081.1 JSUE03014116 JSUE03014117 JSUE03014118 JSUE03014119 JSUE03014120 JSUE03014121

Proteomes

UP000005204 UP000218220 UP000037069 UP000265300 UP000006813 UP000028990 + More
UP000245037 UP000006718

PRIDE

H9J9M6

Interpro

IPR005374 UPF0184_eukaryota

ProteinModelPortal

H9J9M6 A0A2H1WYQ0 A0A2A4K4F8 A0A2W1C3S2 S4P9E7 T1E3D3 + More
A0A1L8EBP1 A0A1L8EEP7 A0A0L0CL97 A0A340YK12 G5ASF6 A0A0P6JG35 A0A091E9K8 A0A0P6IB20 A0A2P8ZG11 R4WQ95 F7H6A0

KEGG

101741970 no KO assigned | (RefSeq) UPF0184 protein AAEL002161

GO

PANTHER

PTHR34344

Length:

88

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.53740

inside

1 - 88

Pi

202.234562

Theta

197.567218

Tajima's D

0.003454

CLR

0.902626

CSRT

0.368381580920954

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics