Gene

KWMTBOMO01929  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006217

Annotation

PREDICTED:_uncharacterized_protein_LOC106693211_[Microplitis_demolitor]

Location

Bomo_Chr4(+):8217044-8220232      View in EpiBrowser

Full name

120.7 kDa protein in NOF-FB transposable element      

Location in the cell

PlasmaMembrane   Reliability : 4.849

CDS

ATGCCACCTGTAGCAGCTGTGCCGGTTGATTTAGCTGTGAAAGTATTAAAAAAATACATTGCTCATTTCGCCAATGATGAATTTCCACAATGGAAGTCAGAAGTCTGGAAAAAAATTGCAAACGATCCTGAGCTGGAGGGTAAATGGTCTATTGGTAGCGTAAGAACGAATGTTAGAGAAGATAGAAGAGGCATTTTGAGTGAAGCCAGAAGACAGTGTGGTATCACTGTAAATATCATATCTAATAAAAAATCAAACGTAAATGAAAATTGTGACATCTCCAAAGAGTCACATGAAGATTGTGATGAGGATAATTTGAATGAAGAATCAGATTCTGAGAACGATGATATTCATAAGCATGAACGTTTTACTGTAGAAATTTCCCGGGATCTGTGGAATGAAATACACAGCCTTCAGCCTCTGGTTTACAAAGGTCGAAAATATGTTGGGTTTAAACCCAAGGTGTGGACCAATGCAGTATCTAATGCTTTTTGGAAGCAGCACCATTTAAAGTGTGCTTTCGTGTTTAAAAGAGGCAGAATTACACAACATGGAAGAAGTTATGCGACTATAATCGGACGCTGTCGAGCTAAAGATTGTCACAATCCAGTGAAAGGAATAATTAAAGACTGTCCAGGAGAGGTCGGGCCCGTATATATTGAAATGTTTTGTCGTGATACTCGTTTCGTAAAACACGAAGATGTCAAAAGACCCCTTAACGGAACAGAACGTCTGAAAGTGCAAGCAGAACTTTTGAAAACTCATGCTTCTGCTTGGAGGAAGGAGAAAGCCAAAGATAATATAGATCCGGGAGATACTGGTTCGCCGTTTGTATATAATCTGAATACTCTGCATCAAGCAAAGAAAGAAACTAACATCAAGAAACTTGGTATTAAAACTGATGACATGCGAGACATGATTTTAGCGATTAGAAACATGTATGTTGATCCGTCTTATGTTAATTCTATTTTGGCGATTGGTGATACACCATTTTATGTATTTTATGCAACTCCAACTGCAATATATTTCTTGAACTTATAA

Protein

MPPVAAVPVDLAVKVLKKYIAHFANDEFPQWKSEVWKKIANDPELEGKWSIGSVRTNVREDRRGILSEARRQCGITVNIISNKKSNVNENCDISKESHEDCDEDNLNEESDSENDDIHKHERFTVEISRDLWNEIHSLQPLVYKGRKYVGFKPKVWTNAVSNAFWKQHHLKCAFVFKRGRITQHGRSYATIIGRCRAKDCHNPVKGIIKDCPGEVGPVYIEMFCRDTRFVKHEDVKRPLNGTERLKVQAELLKTHASAWRKEKAKDNIDPGDTGSPFVYNLNTLHQAKKETNIKKLGIKTDDMRDMILAIRNMYVDPSYVNSILAIGDTPFYVFYATPTAIYFLNL

Keywords

Nucleus   Transposable element  

Feature

chain  120.7 kDa protein in NOF-FB transposable element

Uniprot

H9J9M4   A0A0J7K7I5   A0A0J7KJK3   A0A0J7K7A6   A0A0C9PUU9   A0A0C9RRN0   + More
A0A0C9QGK2   A0A0J7KL71   A0A0C9QSH7   A0A0C9PYU4   A0A0C9R0V9   A0A0C9R7J6   A0A0C9QYG9   A0A0C9RJP6   X1WLI9   J9LGK7   J9M4S9   A0A0C9S2M8   J9L4Y2   J9JNM3   P16320   A0A232ET40   F8UZB2   J9LJ91   J9LWR2   J9L454   J9KEU5   J9M0Q9   K7JLC4   J9LQL0   J9LCG7  

Pubmed

19121390    2548860    2174013    28648823    23685284    20075255    + More

EMBL

BABH01005066    LBMM01012049    KMQ86448.1    LBMM01006475    KMQ90588.1    LBMM01012154    + More
KMQ86378.1    GBYB01005188    JAG74955.1    GBYB01010021    JAG79788.1    GBYB01013698    JAG83465.1    LBMM01005871    KMQ91138.1    GBYB01006689    JAG76456.1    GBYB01006688    JAG76455.1    GBYB01009773    GBYB01009774    GBYB01009779    GBYB01009780    JAG79540.1    JAG79541.1    JAG79546.1    JAG79547.1    GBYB01004000    JAG73767.1    GBYB01008814    JAG78581.1    GBYB01008419    GBYB01008420    JAG78186.1    JAG78187.1    ABLF02012842    ABLF02042922    ABLF02005314    ABLF02005316    ABLF02009076    ABLF02009077    GBYB01015158    GBYB01015161    JAG84925.1    JAG84928.1    ABLF02010792    ABLF02027882    ABLF02019238    ABLF02019242    X15469    X51937    NNAY01002332    OXU21528.1    JF970224    AEI70330.1    ABLF02005523    ABLF02005899    ABLF02019553    ABLF02041465    ABLF02041466    ABLF02005606    ABLF02008252    ABLF02052237    ABLF02060345    ABLF02015773    ABLF02015776    ABLF02014639    ABLF02009572    AAZX01008256    ABLF02015913    ABLF02067192    ABLF02006276    ABLF02006277    ABLF02023267    ABLF02050579   

Proteomes

UP000005204    UP000036403    UP000007819    UP000215335    UP000002358   

PRIDE

H9J9M4    P16320    F8UZB2   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF00078   RVT_1

Interpro

IPR038765   Papain-like_cys_pep_sf        + More
IPR029526   PGBD       
IPR001969   Aspartic_peptidase_AS       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       

SUPFAM

SSF54001   SSF54001        + More
SSF50630   SSF50630       

Gene 3D

2.40.70.10    

ProteinModelPortal

H9J9M4   A0A0J7K7I5   A0A0J7KJK3   A0A0J7K7A6   A0A0C9PUU9   A0A0C9RRN0   + More
A0A0C9QGK2   A0A0J7KL71   A0A0C9QSH7   A0A0C9PYU4   A0A0C9R0V9   A0A0C9R7J6   A0A0C9QYG9   A0A0C9RJP6   X1WLI9   J9LGK7   J9M4S9   A0A0C9S2M8   J9L4Y2   J9JNM3   P16320   A0A232ET40   F8UZB2   J9LJ91   J9LWR2   J9L454   J9KEU5   J9M0Q9   K7JLC4   J9LQL0   J9LCG7  

KEGG

101741636    no KO assigned | (RefSeq) uncharacterized LOC101741636

GO

GO:0016021   GO:0005634   GO:0004190  

Subcellular location

Nucleus  

Length:

346

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.45104

Exp number, first 60 AAs:

0.00155

Total prob of N-in:

0.04948

outside

1  -  346

 

 

Pi

228.950585

Theta

156.562878

Tajima's D

1.655558

CLR

0.38639

CSRT

0.819409029548523

Interpretation

Uncertain