SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01919
Pre Gene Modal
BGIBMGA005935
Annotation
PREDICTED:_frizzled-7-B_[Amyelois_transitella]
Full name
Frizzled-7-B       + More
Frizzled-7-A      
Frizzled-7      
Location in the cell
Cytoplasmic   Reliability : 1.151 Nuclear   Reliability : 2.775
 

Sequence

CDS
ATGGCAAAATTTTGGAAACATTATGTTATTATATTCAGTCTGTTATGTCTTTTTGCGTTAACAAAAGGTTCTCGAGAGATTGTTTATCAAGGCGATAGTCTACCTCAACATGGACGTTGTGAACCCATTACCATTCAGTTTTGTCAGAAATTGCGTTATAATCAAACCATTTTTCCGAATATTTTAAATCAAGCACGACAAGAAGATGCAGCCGCAAACATGCTTCTGTTTACAACTCTCATTAAACTGAATTGCTCTCCTGATCTAAGATTCTTCTTGTGTTCAGTTTATGCACCCGTTTGCACGATACTAGATTCTGCGATACCGCCTTGTCGTCATTTATGTGAAGCTGCAAAACAAAGCTGTGATGTCGTCATACGAAAATTTGATTTTCCTTGGCCCCCTGAGCTTGAATGTTCTGAATTTCCTGAAGTATCTGATAATAACATATGTGTTGGTGACAATAATACTGCCCATGAATCTCGAAAACGCACTGATACCAAGTTTCGTAAGGTTGACTTCAAATCTAACATGGAGAGAGATCCGACTAGATTGCATGAGTTTGTGTGCCCAGTGCAGTTTAAAGTACCAAGACATTTAGATCTTGAATACTCTTTTAAAGTTGGAAATAGAGTTGAACATGACTGTGGAGCCCCATGCAATGGAATGTTCTTCAGTAAAGATGAAAAGAATTTTTCAAGGCTCTGGATTGGAATCTGGGCAGTCCTGTGTGCACTCAGTTGCCTTTTTACTGTGCTAACATTTTTAATAGATACAGATAGATTCAGGTATCCAGAAAGACCCATAATATTTTTGTCAGTTTGTTATCTAATGGTAGCTATTGCCTACATAATGGGTTGGAGTGCAGGTGATAATATAAGCTGCCAAGGGCCTTTTGTTTCTGCTGTCAGTGGAACAAGATTACCCAACATATCAGTTATCACACAAGGTACAAAACATGAGCCATGCACAATACTGTTTATGATAGTATATTTCTTTAGTATGGCTTCGAGTATATGGTGGGTCATATTAACCCTGACATGGTTTTTGGCTGCTGGCCTAAAATGGGGACATGAAGCAATAGAAGCAAATTCCCAATATTTTCATCTTGCTGCTTGGGCAGTACCAGCTGTGAAGACAATATCTATTCTAGCAATGGGGAAAGTAGATGGTGATGTACTGTCAGGTGTATGTTACGTTGGATTATGGGATGCAGAAGCTTTAAGAGGATTTGTGTTGGCACCTTTATGTGTCTATTTAGTGTTTGGAACAATCTTTCTTCTAGCTGGCTTTGTCTCACTGTTTCGGATCAGAACTGTCATGAAACATGATGGGACTAAAACTGATAAATTAGAGAAACTGATGATTCGCATTGGTGTGTTTGGTGTACTATACACCGTGCCTGCCCTCATAGTCATAGCATGTTTGTTCTATGAACAAGTTAATTTTGACAAATGGATGATTGCATGGCAACGAGACATGTGTTCGATACGACAATACTCAATTCCTTGTCCGATAATTCATGAAGAGATAGAAGGACCAAAGTTTGAAATGTTTATGATTAAATATCTAATGACAATGATTGTTGGTATAACATCTAGCTTTTGGATATGGTCTGGTAAAACTTTGATATCATGGTCTCAATTTTTTGACAAAGTTAAAGGTCGCAGAGTAGAAGCCTATGTGTAA
Protein
MAKFWKHYVIIFSLLCLFALTKGSREIVYQGDSLPQHGRCEPITIQFCQKLRYNQTIFPNILNQARQEDAAANMLLFTTLIKLNCSPDLRFFLCSVYAPVCTILDSAIPPCRHLCEAAKQSCDVVIRKFDFPWPPELECSEFPEVSDNNICVGDNNTAHESRKRTDTKFRKVDFKSNMERDPTRLHEFVCPVQFKVPRHLDLEYSFKVGNRVEHDCGAPCNGMFFSKDEKNFSRLWIGIWAVLCALSCLFTVLTFLIDTDRFRYPERPIIFLSVCYLMVAIAYIMGWSAGDNISCQGPFVSAVSGTRLPNISVITQGTKHEPCTILFMIVYFFSMASSIWWVILTLTWFLAAGLKWGHEAIEANSQYFHLAAWAVPAVKTISILAMGKVDGDVLSGVCYVGLWDAEALRGFVLAPLCVYLVFGTIFLLAGFVSLFRIRTVMKHDGTKTDKLEKLMIRIGVFGVLYTVPALIVIACLFYEQVNFDKWMIAWQRDMCSIRQYSIPCPIIHEEIEGPKFEMFMIKYLMTMIVGITSSFWIWSGKTLISWSQFFDKVKGRRVEAYV

Summary

Description
Receptor for Wnt proteins. Acts in both canonical and non-canonical Wnt pathways. Although different papers report differing Wnt preferences, wnt5a, wnt8b and wnt11 have been proposed as synergists. In the canonical Wnt pathway, acts via beta-catenin to promote the expression of the dorsal genes siamois, twin and nodal3 and to establish the dorsal axis of the embryo and induce dorsal mesoderm formation. In a non-canonical Wnt/planar cell polarity (PCP) pathway, acts with sdc4 and dvl2/dsh to regulate convergent extension cell movements during gastrulation. Triggers phosphorylation of dvl2/dsh and its translocation to the plasma membrane. In a third branch of Wnt signaling, acts in a non-canonical pathway via trimeric G proteins, and independently of dvl2/dsh, to recruit protein kinase C (PKC) to the membrane and thus activate PKC. PKC signaling controls cell sorting and tissue separation during gastrulation.
Receptor for Wnt proteins. Acts in both canonical and non-canonical Wnt pathways. Although different papers report differing Wnt preferences, wnt5a, wnt8b and wnt11 have been proposed as synergists. In the canonical Wnt pathway, acts via beta-catenin to promote the expression of the dorsal genes siamois, twin and nodal3 and to establish the dorsal axis of the embryo and induce dorsal mesoderm formation. In a non-canonical Wnt/planar cell polarity (PCP) pathway, acts with sdc4 and dvl2/dsh to regulate convergent extension movements in gastrulation. Triggers phosphorylation of dvl2/dsh and its translocation to the plasma membrane. In a third branch of Wnt signaling, acts in a non-canonical pathway via trimeric G proteins, and independently of dvl2/dsh, to recruit protein kinase C (PKC) to the membrane and thus activate PKC. PKC signaling controls cell sorting and tissue separation during gastrulation (By similarity).
Subunit
Interacts with wnt11 and sdc4. The extracellular domain interacts with the extracellular domain of pcdh8/papc (By similarity). Interacts (via C-terminus) with dvl1 (via PDZ domain).
Interacts with wnt11 and sdc4. The extracellular domain interacts with the extracellular domain of pcdh8/papc.
Interacts with wnt11 and sdc4. The extracellular domain interacts with the extracellular domain of pcdh8/papc (By similarity).
Similarity
Belongs to the G-protein coupled receptor Fz/Smo family.
Keywords
Cell membrane   Developmental protein   Disulfide bond   Endosome   G-protein coupled receptor   Glycoprotein   Membrane   Receptor   Signal   Transducer   Transmembrane   Transmembrane helix   Wnt signaling pathway   Complete proteome   Reference proteome  
Feature
chain  Frizzled-7-B
EMBL
BABH01005049    KU291212    AMR93992.1    KZ149895    PZC78827.1    NWSH01000193    + More
PCG78523.1    ODYU01002642    SOQ40415.1    GDQN01000490    JAT90564.1    KQ460398    KPJ15186.1    JTDY01000698    KOB76184.1    GECZ01030998    GECZ01016509    JAS38771.1    JAS53260.1    KK853378    KDR08023.1    GEDC01007942    JAS29356.1    KQ981490    KYN41115.1    AAZX01011865    GL446556    EFN87644.1    GL439579    EFN67013.1    GBBI01003040    JAC15672.1    KZ288312    PBC28411.1    QOIP01000009    RLU18831.1    KQ434893    KZC10688.1    KK107119    EZA58747.1    GEZM01001643    JAV97627.1    GBHO01044156    GBHO01036410    GBHO01010232    JAF99447.1    JAG07194.1    JAG33372.1    GBRD01018111    GDHC01020404    JAG47716.1    JAP98224.1    KB632006    ERL87962.1    APGK01034123    KB740904    ENN78450.1    KQ971342    EFA04653.1    LN849082    CRI73784.1    JH431585    GFTR01006734    JAW09692.1    KK113932    KFM61394.1    GANP01012075    JAB72393.1    ABJB010293041    DS703155    EEC05379.1    GACK01006785    JAA58249.1    PZQS01000001    PVD39003.1    GEDV01004944    JAP83613.1    KC690271    AHB53231.1    GL732530    EFX86266.1    JT416322    AHH42008.1    AJ301617    CAC37335.1    BC056280    AAH56280.2    CR407547    BC068322    AAH68322.2    KB200430    ESP01680.1    AFYH01133944    MG711509    AUT31435.1    AF336123    AAK49948.1    AERX01013317    RJVU01059775    ROJ66271.1    JARO02005224    KPP67133.1    BX927225    AF437316    AF336124    AF510101    AAL87635.1    AAM00192.1    AAN03844.1    GG666505    EEN61413.1    AF159106    BC042228    AAH42228.1    RJVU01051519    ROL41742.1    HADW01019494    SBP20894.1    AHAT01034647    CP026243    AWO97156.1    AFYH01065303    AHAT01004650    CM004482    OCT63845.1    AF039215    AJ243323    AF179213    AF114151    BC049397    AAH49397.1    CM001264    EHH21587.1    AQIA01015569    AC149036    CR759995    BC090579    AAH90579.1    AAZ06130.1    CAJ82817.1    RJVU01051648    ROL41476.1    AERX01048603    AAMC01057529    AEMK02000100    DQIR01145990    HDB01467.1    AANG04002752    AEYP01060373    CM004483    OCT61339.1    GFFV01001978    JAV37967.1    AAQR03032755   
Pfam
PF01392   Fz        + More
PF01534   Frizzled
Interpro
IPR015526   Frizzled/SFRP        + More
IPR026552   FZD7       
IPR036790   Frizzled_dom_sf       
IPR017981   GPCR_2-like       
IPR020067   Frizzled_dom       
IPR000539   Frizzled/Smoothened_TM       
IPR026550   FZD2       
IPR026548   FZD1       
SUPFAM
SSF63501   SSF63501       
Gene 3D
PDB
6BD4     E-value=3.52885e-86,     Score=813

Ontologies

Topology

Subcellular location
Cell membrane   Associated to the plasma membrane in the presence of FZD7 and phosphatidylinositol 4,5-bisphosphate (PIP2). Localized in recycling endosomes in other conditions.   With evidence from 2 publications.
Endosome membrane   Associated to the plasma membrane in the presence of FZD7 and phosphatidylinositol 4,5-bisphosphate (PIP2). Localized in recycling endosomes in other conditions.   With evidence from 2 publications.
SignalP
Position:   1 - 23,         Likelihood:  0.989725
 
 
Length:
562
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
163.3181
Exp number, first 60 AAs:
10.03284
Total prob of N-in:
0.47247
POSSIBLE N-term signal
sequence
outside
1  -  234
TMhelix
235  -  257
inside
258  -  269
TMhelix
270  -  289
outside
290  -  331
TMhelix
332  -  354
inside
355  -  366
TMhelix
367  -  386
outside
387  -  411
TMhelix
412  -  434
inside
435  -  454
TMhelix
455  -  477
outside
478  -  523
TMhelix
524  -  546
inside
547  -  562
 
 

Population Genetic Test Statistics

Pi
140.565563
Theta
178.964311
Tajima's D
-0.874882
CLR
1184.20175
CSRT
0.161941902904855
Interpretation
Uncertain
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