Gene

KWMTBOMO01896  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005943

Annotation

PREDICTED:_FAD-dependent_oxidoreductase_domain-containing_protein_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr4(-):7508823-7515958      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.246 Nuclear   Reliability : 2.967 PlasmaMembrane   Reliability : 1.667

CDS

ATGATAAAAACTTGGAATATAATGACGAAATCTAATACAAGATTTTCGTACCCAGAAAATACTGATATTGTTATAATAGGTGGTGGTATAATAGGAGCAGCAACAGCTTATTGGTTAAAGCGCAGAGCTGGTGATGGTCTCTCAGTAGTGGTCATAGAAAAAGATTTTTCCTATAAACAAGCTCAAAGGCACCTTCAGCATGGAACACTTTCACAACATTTCACACTACCAGAAAATTTGTTCCTATCGCAATTCAGTGCATTCTTCCTTAGAAACATTAGAGAACATCTTGGTGAAGATATAAATGTTGAATATTGTCCAACTGGGTCATTAGTACTGGCGAGTAACGACTATGCACAAAAATTAGAAGAAACTTCTTCATTATTGAAGGAACATGGGTCACCAAATGAACTTTTGTCTCCTAAGGAAATAAATAAAAAGTTTCCATGGATAAATACTGCAGATATCAAGTTAGGATGCATGGGTGTAGAATCTGAGGGAACATTTAATGGATGGGAACTACATAAAGGCTTTGTAAAAAAGTCAAAAGAACTTGGAGCATTATATATTAATGCTGAAGTAGTTGGTTTTGATTTGGAGCAACAGCGAGATGTTCTAATGGAAGGTGTCACCCCAGGTGCATTTGAAAGGATAATGCGAGTTAGATACATGACAGAAGAAAATGAAGAATATGGAATAAAATTTGCTGGATGCATATTAACAGCTGGTTCTGATTCTAGTGAAATAGCTAAATTTGCAAAAGTAGGTACTGGTGATGGAATGCTCATGGTACCATTACCTGTTGAGAAAAGAAAACATGAAGTTTATTCTCTTGAAGGAAATAATACAGAAATTGGTCTTAATACTCCCATGATAATGGATACAACTGGGTTATGGTTACAAAGAAAAGGTTTAGGAAAGGACTTCTTAGGTGGATATTTACCTTCACTAGATCAAAATGATAATCTTGTTGATACAGAACAGTATTTGAAAACAACTTTTCTATCATCATTAATGCATAGAATCCCTAGCTGTAATAATGCTCAGGTACAAAGCCATAGCAGTTTGTATTATGATTGCACCACATACGACAATTCAGGAATATTGGGACCACATCCTTATCATAATAATTTGTATATTGCTGCAGGATTTGGTCAGCTAGGTTGTCAACATGCTCCGGGTTTGGGAAGAGCTCTAACGGAACTAATCATAGACAGTCAGTTCAATACTATCGACTTGACAAGGCTTGGATTTGACAGATTATTAACTGATCAACCTATGATGGAATGCAATGCTTATTGA

Protein

MIKTWNIMTKSNTRFSYPENTDIVIIGGGIIGAATAYWLKRRAGDGLSVVVIEKDFSYKQAQRHLQHGTLSQHFTLPENLFLSQFSAFFLRNIREHLGEDINVEYCPTGSLVLASNDYAQKLEETSSLLKEHGSPNELLSPKEINKKFPWINTADIKLGCMGVESEGTFNGWELHKGFVKKSKELGALYINAEVVGFDLEQQRDVLMEGVTPGAFERIMRVRYMTEENEEYGIKFAGCILTAGSDSSEIAKFAKVGTGDGMLMVPLPVEKRKHEVYSLEGNNTEIGLNTPMIMDTTGLWLQRKGLGKDFLGGYLPSLDQNDNLVDTEQYLKTTFLSSLMHRIPSCNNAQVQSHSSLYYDCTTYDNSGILGPHPYHNNLYIAAGFGQLGCQHAPGLGRALTELIIDSQFNTIDLTRLGFDRLLTDQPMMECNAY

Uniprot

H9J8V1   A0A194PMC2   A0A194R250   A0A2A4IXJ2   A0A2W1BZ34   A0A212F0T4   + More
S4PPD5   A0A2H1X2X9   A0A1L8DAR2   A0A1L8DAP0   A0A182R9S2   A0A084VMC5   B0WCQ5   A0A182LU44   Q16HC9   A0A182H861   Q16N12   A0A182IKV2   A0A182WGX2   A0A2J7Q5Q8   A0A1I8N1X4   T1PF41   A0A182QTS3   A0A2J7Q5P7   A0A182YFG1   A0A182T3I5   A0A1W4WG11   Q7PW61   A0A1I8NZ45   A0A2M4BJZ3   A0A2M4BJX5   A0A067RS91   A0A1S4H017   A0A182KUS6   A0A182I4X0   A0A182X2Y4   A0A182ULX1   U5EGT3   A0A182NEV9   A0A2J7Q5P8   W5J8I6   A0A182UG59   A0A1Y1LDJ0   A0A182K3Q1   A0A2M4AG96   A0A2J7Q5P0   A0A1Q3FJ94   A0A1B0A538   A0A2M4AG02   A0A1A9W064   A0A182PDF3   D3TRX6   B4LS15   A0A0M4ERA7   A0A0L0BQE6   A0A0C9PVC0   B4KE65   A0A1B0B7N6   A0A1A9XL17   D6WK94   A0A1A9V9I0   A0A182F5I7   B4N0X8   A0A0L7KY90   Q9VJ10   A0A2J7Q5P6   T1GPK0   A0A3B0KKA3   Q29PI3   B4I5Q4   B4GKT6   B4Q9F3   N6TM66   B3NMA3   A0A0A1X617   J3JYT6   W8BW46   A0A1W4VXU0   A0A1J1I3D8   B4PAF9   A0A0A1XB41   A0A0K8UR91   B3MNQ8   A0A2J7Q5P9   A0A034VRX3   A0A034W0E1   A0A034W2Y0   A0A0M3QVD2   W8C9U3   A0A0K8VT08   K7IRF3   B4KNI5   B3MIP7   A0A1B6F1W8   A0A2M3ZIC9   B4J6J4   B4LK08   A0A195F9S8   A0A2M3Z9K5   T1I709  

Pubmed

19121390    26354079    28756777    22118469    23622113    24438588    + More
17510324    26483478    25315136    25244985    12364791    24845553    20966253    20920257    23761445    28004739    20353571    17994087    26108605    18057021    18362917    19820115    26227816    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    22936249    23537049    25830018    22516182    24495485    17550304    25348373    20075255   

EMBL

BABH01005005    BABH01005006    KQ459601    KPI93884.1    KQ460870    KPJ11772.1    + More
NWSH01005932    PCG63833.1    KZ149895    PZC78844.1    AGBW02011047    OWR47311.1    GAIX01000312    JAA92248.1    ODYU01012586    SOQ58994.1    GFDF01010528    JAV03556.1    GFDF01010556    JAV03528.1    ATLV01014585    KE524975    KFB39119.1    DS231890    EDS43781.1    AXCM01001875    CH478183    EAT33646.1    JXUM01028759    KQ560831    KXJ80698.1    CH477842    EAT35741.1    NEVH01017553    PNF23905.1    KA647309    AFP61938.1    AXCN02002830    PNF23904.1    AAAB01008984    EAA14740.4    GGFJ01004234    MBW53375.1    GGFJ01004235    MBW53376.1    KK852451    KDR23675.1    APCN01003737    GANO01003313    JAB56558.1    PNF23907.1    ADMH02001866    ETN60772.1    GEZM01060706    JAV70951.1    GGFK01006490    MBW39811.1    PNF23903.1    GFDL01007451    JAV27594.1    GGFK01006404    MBW39725.1    CCAG010004816    EZ424178    ADD20454.1    CH940649    EDW63691.1    CP012523    ALC39675.1    JRES01001517    KNC22310.1    GBYB01005368    JAG75135.1    CH933807    EDW11810.2    KRG02923.1    JXJN01009696    KQ971342    EFA03961.2    CH963920    EDW78140.1    JTDY01004557    KOB68014.1    AE014134    AY113419    AAF53748.1    AAM29424.1    PNF23906.1    CAQQ02036668    OUUW01000010    SPP86216.1    CH379058    EAL34310.1    CH480822    EDW55710.1    CH479184    EDW37252.1    CM000361    CM002910    EDX05460.1    KMY90931.1    APGK01018911    KB740085    ENN81544.1    CH954179    EDV54703.1    GBXI01009090    GBXI01007705    JAD05202.1    JAD06587.1    BT128417    AEE63374.1    GAMC01009074    JAB97481.1    CVRI01000038    CRK94290.1    CM000158    EDW90367.1    GBXI01006096    JAD08196.1    GDHF01023110    JAI29204.1    CH902620    EDV31145.1    PNF23908.1    GAKP01012895    GAKP01012891    JAC46061.1    GAKP01009892    GAKP01009891    JAC49061.1    GAKP01009893    GAKP01009890    JAC49059.1    CP012524    ALC42173.1    GAMC01001854    JAC04702.1    GDHF01010331    JAI41983.1    CH933808    EDW08944.1    CH902619    EDV38123.1    GECZ01025622    JAS44147.1    GGFM01007518    MBW28269.1    CH916367    EDW01995.1    CH940648    EDW61662.1    KQ981727    KYN36804.1    GGFM01004367    MBW25118.1    ACPB03005126   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000075900    + More
UP000030765    UP000002320    UP000075883    UP000008820    UP000069940    UP000249989    UP000075880    UP000075920    UP000235965    UP000095301    UP000075886    UP000076408    UP000075901    UP000192223    UP000007062    UP000095300    UP000027135    UP000075882    UP000075840    UP000076407    UP000075903    UP000075884    UP000000673    UP000075902    UP000075881    UP000092445    UP000091820    UP000075885    UP000092444    UP000008792    UP000092553    UP000037069    UP000009192    UP000092460    UP000092443    UP000007266    UP000078200    UP000069272    UP000007798    UP000037510    UP000000803    UP000015102    UP000268350    UP000001819    UP000001292    UP000008744    UP000000304    UP000019118    UP000008711    UP000192221    UP000183832    UP000002282    UP000007801    UP000002358    UP000001070    UP000078541    UP000015103   

PRIDE

H9J8V1    Q9VJ10   

Pfam

PF01266   DAO        + More
PF13445   zf-RING_UBOX
PF00240   ubiquitin

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR006076   FAD-dep_OxRdtase       
IPR001876   Znf_RanBP2       
IPR036443   Znf_RanBP2_sf       
IPR017907   Znf_RING_CS       
IPR013083   Znf_RING/FYVE/PHD       
IPR001841   Znf_RING       
IPR027370   Znf-RING_LisH       
IPR000626   Ubiquitin_dom       
IPR029071   Ubiquitin-like_domsf       

SUPFAM

SSF51905   SSF51905        + More
SSF90209   SSF90209       
SSF54236   SSF54236       

Gene 3D

3.50.50.60     3.30.40.10    

ProteinModelPortal

H9J8V1   A0A194PMC2   A0A194R250   A0A2A4IXJ2   A0A2W1BZ34   A0A212F0T4   + More
S4PPD5   A0A2H1X2X9   A0A1L8DAR2   A0A1L8DAP0   A0A182R9S2   A0A084VMC5   B0WCQ5   A0A182LU44   Q16HC9   A0A182H861   Q16N12   A0A182IKV2   A0A182WGX2   A0A2J7Q5Q8   A0A1I8N1X4   T1PF41   A0A182QTS3   A0A2J7Q5P7   A0A182YFG1   A0A182T3I5   A0A1W4WG11   Q7PW61   A0A1I8NZ45   A0A2M4BJZ3   A0A2M4BJX5   A0A067RS91   A0A1S4H017   A0A182KUS6   A0A182I4X0   A0A182X2Y4   A0A182ULX1   U5EGT3   A0A182NEV9   A0A2J7Q5P8   W5J8I6   A0A182UG59   A0A1Y1LDJ0   A0A182K3Q1   A0A2M4AG96   A0A2J7Q5P0   A0A1Q3FJ94   A0A1B0A538   A0A2M4AG02   A0A1A9W064   A0A182PDF3   D3TRX6   B4LS15   A0A0M4ERA7   A0A0L0BQE6   A0A0C9PVC0   B4KE65   A0A1B0B7N6   A0A1A9XL17   D6WK94   A0A1A9V9I0   A0A182F5I7   B4N0X8   A0A0L7KY90   Q9VJ10   A0A2J7Q5P6   T1GPK0   A0A3B0KKA3   Q29PI3   B4I5Q4   B4GKT6   B4Q9F3   N6TM66   B3NMA3   A0A0A1X617   J3JYT6   W8BW46   A0A1W4VXU0   A0A1J1I3D8   B4PAF9   A0A0A1XB41   A0A0K8UR91   B3MNQ8   A0A2J7Q5P9   A0A034VRX3   A0A034W0E1   A0A034W2Y0   A0A0M3QVD2   W8C9U3   A0A0K8VT08   K7IRF3   B4KNI5   B3MIP7   A0A1B6F1W8   A0A2M3ZIC9   B4J6J4   B4LK08   A0A195F9S8   A0A2M3Z9K5   T1I709  

PDB

1Y56     E-value=1.15064e-05,     Score=117

KEGG

101738537    K18166 FAD-dependent oxidoreductase domain-containing protein 1 | (RefSeq) FAD-dependent oxidoreduct

GO

GO:0016491   GO:0016021   GO:0005747   GO:0005737   GO:0032981   GO:0046872   GO:0000502   GO:0005262   GO:0030176   GO:0032469   GO:0003723   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634   GO:0055114  

Length:

433

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

16.98302

Exp number, first 60 AAs:

16.97781

Total prob of N-in:

0.88852

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  39

outside

40  -  433

 

 

Pi

241.102236

Theta

173.66334

Tajima's D

0.27653

CLR

0.330032

CSRT

0.450677466126694

Interpretation

Uncertain