Gene

KWMTBOMO01895  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006200

Annotation

PREDICTED:_transmembrane_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr4(+):7503759-7508805      View in EpiBrowser

Full name

Calcium load-activated calcium channel      

Location in the cell

PlasmaMembrane   Reliability : 2.571

CDS

ATGTGGAGCGATTCTCTCTTAATAGTTTTCATCTCTATCTGCACTGCGTTCTTAGGAGAAGGCTTAACATGGGTCTTAGTCTACAGAACGGAGAAATATCAAAAACTGAAAGTGGAAGTCGAACGACAGAGTAAAAAATTAGAGAAACGTAAGGAAGCTCATGGAGACTCACTAGACAGACAACAAAAGAAAAAAATTGAAAGAGAAGAAGAGAGACTCAAAAACAATAACAGAGACTTGTCTTTGGTGAAAATGAAATCAATGTTTGCAATTGGTTTTGCTTTTACTGCCTTGCTCAGCATGTTTAATAGTATATTTGATGGCAGAGTAGTGGCTAAACTTCCATTTTATCCTATTTCATGGATTCAAGGTCTGAGCCATAGGAATTTACCTGGTGATGATTACACAGATTGTTCTTTCATATTTTTGTACATTCTGTGTACAATGAGCATCAGACAAAACATACAAAAGTTGCTTGGTTTTGCACCTTCTCGAGCTGCTTCAAAACAAGGTGGTGCTCTATTTGCTGCACCTCAGACACAATTCAAATGA

Protein

MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDRQQKKKIEREEERLKNNNRDLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAPQTQFK

Description

Calcium-selective channel required to prevent calcium stores from overfilling.

Similarity

Belongs to the TMCO1 family.

Uniprot

H9J9K7   A0A2H1WG97   A0A2W1BYW6   S4NNQ0   A0A2A4IXD2   A0A194R7C6   + More
A0A212F0Q7   A0A1E1WII0   A0A3B0JVW0   A0A1B6MUL9   A0A1B6G5C0   A0A1B6HQD4   Q29PI2   B4GKT5   A0A154PCM7   A0A1E1WE61   A0A026WQH3   A0A2A3E2H9   A0A088AAI1   A0A232EG62   K7IRF4   A0A0J7NIQ4   E1ZYH3   A0A1B6DZX5   A0A195DLY3   A0A195FRS8   F4X1F7   A0A158NA82   A0A1Y1LBB5   A0A195BKJ5   D6WNP6   A0A146LY39   A0A0A9X7M7   Q16HD0   A0A023EJ13   A0A0L7RIG5   B4KE66   B0WCQ4   A0A2J7RG00   E2B8A0   A0A195CBA0   A0A1Q3FAS9   A0A1W4W8T0   B4LS16   B4N0X9   B3MNQ9   A0A0M5IWM4   A0A2P8YZN4   W8B8E0   A0A0K8UBG6   A0A034WWQ9   B4JAM2   A0A1I8M3K4   B4PAF8   B4I5Q3   B3NMA4   B4Q9F2   Q9VJ11   R4UNJ8   A0A1A9XL16   A0A1A9V9J0   A0A1B0B7N4   R4WDD7   J3JXQ8   A0A1L8D937   A0A336LRJ4   C4WTZ9   A0A224XLK2   R4G4H6   A0A067QH92   A0A182JA20   A0A1L8EE97   A0A1S4H037   A0A182PDF2   A0A182V3M2   A0A182U5Y7   A0A182X2Y3   A0A182I4X1   A0A2R7W0I2   A0A1I8P0X4   A0A182K3Q2   A0A182LXX3   A0A182Q355   A0A182YFG8   A0A182WGX3   A0A182S9R9   A0A0T6AUX6   A0A182NEV8   A0A2M3Z704   A0A2M4C0V7   W5J9U7   A0A182F5I6   U5EUK2   A0A2M4A761   A0A0P4WA22   A0A151X7J0   A0A1Z5L749   A0A0N0BIU6   A0A2R5LHX3   A0A0K8RGK0  

Pubmed

19121390    28756777    23622113    26354079    22118469    15632085    + More
17994087    24508170    30249741    28648823    20075255    20798317    21719571    21347285    28004739    18362917    19820115    26823975    25401762    17510324    24945155    26483478    29403074    24495485    25348373    25315136    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23691247    22516182    23537049    24845553    12364791    25244985    20920257    23761445    28528879   

EMBL

BABH01005005    ODYU01008466    SOQ52098.1    KZ149895    PZC78845.1    GAIX01013841    + More
JAA78719.1    NWSH01005932    PCG63842.1    KQ460870    KPJ11771.1    AGBW02011047    OWR47312.1    GDQN01004231    JAT86823.1    OUUW01000010    SPP86215.1    GEBQ01000364    JAT39613.1    GECZ01012124    JAS57645.1    GECU01030891    JAS76815.1    CH379058    EAL34311.1    CH479184    EDW37251.1    KQ434870    KZC09571.1    GDQN01005786    JAT85268.1    KK107131    QOIP01000012    EZA58183.1    RLU15616.1    KZ288444    PBC25684.1    NNAY01004866    OXU17324.1    LBMM01004458    KMQ92395.1    GL435215    EFN73770.1    GEDC01006094    JAS31204.1    KQ980734    KYN13851.1    KQ981305    KYN42992.1    GL888529    EGI59685.1    ADTU01010074    GEZM01060706    GEZM01060705    JAV70952.1    KQ976455    KYM85168.1    KQ971342    EFA03833.1    GDHC01009721    GDHC01009413    GDHC01006550    JAQ08908.1    JAQ09216.1    JAQ12079.1    GBHO01026877    GBHO01022848    GBHO01016329    GBHO01001921    GBHO01001918    GBHO01001917    GBHO01001916    GBHO01001915    GBRD01004945    JAG16727.1    JAG20756.1    JAG27275.1    JAG41683.1    JAG41686.1    JAG41687.1    JAG41688.1    JAG41689.1    JAG60876.1    CH478183    CH477842    EAT33645.1    EAT35740.1    JXUM01028759    GAPW01004849    KQ560831    JAC08749.1    KXJ80697.1    KQ414585    KOC70521.1    CH933807    EDW11811.1    DS231890    EDS43780.1    NEVH01004408    PNF39753.1    GL446286    EFN88102.1    KQ978009    KYM98139.1    GFDL01010437    JAV24608.1    CH940649    EDW63692.1    CH963920    EDW78141.1    CH902620    EDV31146.1    CP012523    ALC39674.1    PYGN01000266    PSN49707.1    GAMC01009075    JAB97480.1    GDHF01028403    JAI23911.1    GAKP01000754    JAC58198.1    CH916368    EDW02808.1    CM000158    EDW90366.1    CH480822    EDW55709.1    CH954179    EDV54704.1    CM000361    CM002910    EDX05459.1    KMY90930.1    AE014134    BT023490    AAF53747.1    AAY84890.1    KC740921    AGM32745.1    JXJN01009696    AK417588    BAN20803.1    APGK01040621    BT128029    KB740984    KB630727    KB632357    AEE62990.1    ENN76191.1    ERL83820.1    ERL93442.1    GFDF01011113    JAV02971.1    UFQS01000134    UFQT01000134    SSX00262.1    SSX20642.1    ABLF02034886    ABLF02034891    ABLF02050279    AK340839    AK340840    AK340841    AK340842    BAH71369.1    GFTR01003060    JAW13366.1    ACPB03005126    GAHY01000766    JAA76744.1    KK853699    KDQ96171.1    GFDG01001834    JAV16965.1    AAAB01008984    APCN01003737    KK854217    PTY13222.1    AXCM01001875    AXCN02002830    LJIG01022778    KRT78765.1    GGFM01003534    MBW24285.1    GGFJ01009788    MBW58929.1    ADMH02001866    ETN60771.1    GANO01002286    JAB57585.1    GGFK01003298    MBW36619.1    GDRN01074834    JAI63165.1    KQ982446    KYQ56337.1    GFJQ02003870    JAW03100.1    KQ435727    KOX77964.1    GGLE01004791    MBY08917.1    GADI01003526    JAA70282.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000268350    UP000001819    + More
UP000008744    UP000076502    UP000053097    UP000279307    UP000242457    UP000005203    UP000215335    UP000002358    UP000036403    UP000000311    UP000078492    UP000078541    UP000007755    UP000005205    UP000078540    UP000007266    UP000008820    UP000069940    UP000249989    UP000053825    UP000009192    UP000002320    UP000235965    UP000008237    UP000078542    UP000192221    UP000008792    UP000007798    UP000007801    UP000092553    UP000245037    UP000001070    UP000095301    UP000002282    UP000001292    UP000008711    UP000000304    UP000000803    UP000092443    UP000078200    UP000092460    UP000019118    UP000030742    UP000007819    UP000015103    UP000027135    UP000075880    UP000075885    UP000075903    UP000075902    UP000076407    UP000075840    UP000095300    UP000075881    UP000075883    UP000075886    UP000076408    UP000075920    UP000075901    UP000075884    UP000000673    UP000069272    UP000075809    UP000053105   

PRIDE

H9J9K7    Q9VJ11   

Pfam

PF01956   EMC3_TMCO1

Interpro

IPR008559   TMCO1        + More
IPR002809   EMC3/TMCO1       

ProteinModelPortal

H9J9K7   A0A2H1WG97   A0A2W1BYW6   S4NNQ0   A0A2A4IXD2   A0A194R7C6   + More
A0A212F0Q7   A0A1E1WII0   A0A3B0JVW0   A0A1B6MUL9   A0A1B6G5C0   A0A1B6HQD4   Q29PI2   B4GKT5   A0A154PCM7   A0A1E1WE61   A0A026WQH3   A0A2A3E2H9   A0A088AAI1   A0A232EG62   K7IRF4   A0A0J7NIQ4   E1ZYH3   A0A1B6DZX5   A0A195DLY3   A0A195FRS8   F4X1F7   A0A158NA82   A0A1Y1LBB5   A0A195BKJ5   D6WNP6   A0A146LY39   A0A0A9X7M7   Q16HD0   A0A023EJ13   A0A0L7RIG5   B4KE66   B0WCQ4   A0A2J7RG00   E2B8A0   A0A195CBA0   A0A1Q3FAS9   A0A1W4W8T0   B4LS16   B4N0X9   B3MNQ9   A0A0M5IWM4   A0A2P8YZN4   W8B8E0   A0A0K8UBG6   A0A034WWQ9   B4JAM2   A0A1I8M3K4   B4PAF8   B4I5Q3   B3NMA4   B4Q9F2   Q9VJ11   R4UNJ8   A0A1A9XL16   A0A1A9V9J0   A0A1B0B7N4   R4WDD7   J3JXQ8   A0A1L8D937   A0A336LRJ4   C4WTZ9   A0A224XLK2   R4G4H6   A0A067QH92   A0A182JA20   A0A1L8EE97   A0A1S4H037   A0A182PDF2   A0A182V3M2   A0A182U5Y7   A0A182X2Y3   A0A182I4X1   A0A2R7W0I2   A0A1I8P0X4   A0A182K3Q2   A0A182LXX3   A0A182Q355   A0A182YFG8   A0A182WGX3   A0A182S9R9   A0A0T6AUX6   A0A182NEV8   A0A2M3Z704   A0A2M4C0V7   W5J9U7   A0A182F5I6   U5EUK2   A0A2M4A761   A0A0P4WA22   A0A151X7J0   A0A1Z5L749   A0A0N0BIU6   A0A2R5LHX3   A0A0K8RGK0  

KEGG

101738669    K21891 calcium load-activated calcium channel | (RefSeq) transmembrane and coiled-coil domain-contai

GO

GO:0005262   GO:0032469   GO:0030176   GO:0016020   GO:0003723   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634  

PANTHER

PTHR20917  

Length:

183

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

46.38758

Exp number, first 60 AAs:

22.93469

Total prob of N-in:

0.06273

POSSIBLE N-term signal

sequence

outside

1  -  5

TMhelix

6  -  28

inside

29  -  86

TMhelix

87  -  106

outside

107  -  183

 

 

Pi

134.764259

Theta

228.974943

Tajima's D

0.322065

CLR

0.002498

CSRT

0.466776661166942

Interpretation

Possibly Positive selection