Gene

KWMTBOMO01891

Pre Gene Modal

BGIBMGA005945

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_suppressor_APC_domain-containing_protein_2_[Bombyx_mori]

Location

Bomo_Chr4(-):7427557-7430538      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.282

CDS

ATGGAGTCTTTACCAAAGCAGTTTGTAGCAGCTATGAGAACATTGTTTGATATAATGGATGATAAACACACGGGTTATGTTAAACTAACAGACATTGAAAACCGCTGGCGTGATGATCGCACGAAAGGACTTCCTCGAGGTGTAATTGAAAGTTTACAAAAAGTTGCTTCTCATGATGGACTATTAACATTCGACAGGTTTTGTACGGGTTTAAAAATTTGCCTTCTACGTAATCAAGTCGACAATACAACTAGTAAAGTGGATCAGCATGAAGCAGACATAAAAAACTCTGATTTAGTAATGGCAATAAATACTCAATCACAGCCTTCTTCGACAAATTTATTAGAAGACGATGAGGTTAACTTACATAGAAGTTGGAATGTTATGAAAAATGCAGAGACCATGTCACAGTATAAAGATTCTAACAGCATGGCTCAATTATTGACACGAAAAGAAACAATAATACAAGACTCTAGACATCATGCACCCAATGGGAAACACGATCATGGCTTAAGACCTTTTGGCCCTCCAAAACCTCCAAGAATTCAAAACCAAATTGCAGACAGAAAAGATACAATTAGATCATATAAGTCCGAGATAGAAAATGAATTTGAAACTGAACAAACAACAACAAATAAATTAGATTTTGATGAAATATCTCGCGTAGTTGAGGATCAAAGTCGGGAACTGGGAGATGGACGATCATCTAATGAAACACAAATTCAATTGCGAAGGCCAACGCGACGTAGAGAACCGCGTCGGCACACCCTACACAATGGTGTTGATTACAATCTTCTTAAACGAATGAAACAAATTGAACAAGAAAAGGATATCTTATTACAAGGGCTATCTGCGATCGAAGAAGCACGGGAATGGTATTTAAAACAATTGACAGAAGTTCAAGAGAAGATGCGTTACGCTGGCAGAATGGGTGCTTATGTGGAGCCTTGGAGTGAAGCACACCAAGAGCGGCTGGAACTACTGCGCGCAAGGGTCTTGGAATTAAATCGACAATTAGGAGCGTTAGCGGCAGGCTGGAGACACGGTCCTCTCTCTCTGCATATGAATTTGGCTTTGCCAGCTTCGTCCCTCTCCGGGACTCACGTCACGTCGAATAATGCTGCAGTACTCAGATCCCAAAATCGTATGTTAGCAGAGGAAGTGAATAAGAAGAATGAAAGAATATCAGTTTTGGAACGAGAAAAGTCTGCACTCATTCGAGAACTTTTGCTACAAAGAAATAGAAGTAAAATTATGGACAATTTTACGTAA

Protein

MESLPKQFVAAMRTLFDIMDDKHTGYVKLTDIENRWRDDRTKGLPRGVIESLQKVASHDGLLTFDRFCTGLKICLLRNQVDNTTSKVDQHEADIKNSDLVMAINTQSQPSSTNLLEDDEVNLHRSWNVMKNAETMSQYKDSNSMAQLLTRKETIIQDSRHHAPNGKHDHGLRPFGPPKPPRIQNQIADRKDTIRSYKSEIENEFETEQTTTNKLDFDEISRVVEDQSRELGDGRSSNETQIQLRRPTRRREPRRHTLHNGVDYNLLKRMKQIEQEKDILLQGLSAIEEAREWYLKQLTEVQEKMRYAGRMGAYVEPWSEAHQERLELLRARVLELNRQLGALAAGWRHGPLSLHMNLALPASSLSGTHVTSNNAAVLRSQNRMLAEEVNKKNERISVLEREKSALIRELLLQRNRSKIMDNFT

Uniprot

H9J8V3   A0A2H1WS06   A0A2W1BUW9   A0A2A4J6W0   A0A194PMC7   A0A194R245   + More
A0A212F0S0   A0A0L7LHM4   A0A1W4XU04   D7EJ90   A0A087ZZL0   A0A195FQ34   E9IGH0   F4WGX2   E2ASR5   A0A195DAM6   A0A158NFE9   E2B5T2   J9K898   A0A026WIS2   K7IMD3   A0A232EXH8   A0A0C9RBB2   A0A0T6B777   A0A2S2PBV5   A0A3Q0IVG7   A0A3Q0IVE5   A0A1A9V6A8   A0A1B0BW42   A0A1A9ZZH1   A0A1B0GC55   A0A2A3EJZ3   A0A336MYE5   A0A1S4JE12   A0A3L8DES2   A0A0L7R956   A0A1A9X9N0   A0A3P9HFY1   A0A3B3TEV5   A0A3B3TEX0   A0A2D0QEV1   A0A2H8TYM4  

Pubmed

19121390    28756777    26354079    22118469    26227816    18362917    + More
19820115    21282665    21719571    20798317    21347285    24508170    20075255    28648823    30249741    17554307    29240929   

EMBL

BABH01004998    ODYU01010624    SOQ55859.1    KZ149895    PZC78848.1    NWSH01002982    + More
PCG67153.1    KQ459601    KPI93889.1    KQ460870    KPJ11767.1    AGBW02011047    OWR47317.1    JTDY01001163    KOB74686.1    DS497698    EFA12609.1    KQ981340    KYN42536.1    GL763048    EFZ20315.1    GL888147    EGI66591.1    GL442346    EFN63547.1    KQ981063    KYN09921.1    ADTU01014381    ADTU01014382    GL445887    EFN88901.1    ABLF02035742    KK107199    EZA55551.1    NNAY01001740    OXU23062.1    GBYB01004160    GBYB01004161    JAG73927.1    JAG73928.1    LJIG01009376    KRT83204.1    GGMR01014310    MBY26929.1    JXJN01021584    JXJN01021585    CCAG010018997    KZ288230    PBC31582.1    UFQT01003997    SSX35412.1    QOIP01000009    RLU18970.1    KQ414627    KOC67405.1    GFXV01007086    MBW18891.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000192223    UP000007266    UP000005203    UP000078541    UP000007755    UP000000311    UP000078492    UP000005205    UP000008237    UP000007819    UP000053097    UP000002358    UP000215335    UP000079169    UP000078200    UP000092460    UP000092445    UP000092444    UP000242457    UP000279307    UP000053825    UP000092443    UP000265200    UP000261540    UP000221080   

PRIDE

H9J8V3   

Interpro

IPR011992   EF-hand-dom_pair        + More
IPR026828   Suppressor_APCD_1/2       
IPR000742   EGF-like_dom       

SUPFAM

SSF47473   SSF47473       

ProteinModelPortal

H9J8V3   A0A2H1WS06   A0A2W1BUW9   A0A2A4J6W0   A0A194PMC7   A0A194R245   + More
A0A212F0S0   A0A0L7LHM4   A0A1W4XU04   D7EJ90   A0A087ZZL0   A0A195FQ34   E9IGH0   F4WGX2   E2ASR5   A0A195DAM6   A0A158NFE9   E2B5T2   J9K898   A0A026WIS2   K7IMD3   A0A232EXH8   A0A0C9RBB2   A0A0T6B777   A0A2S2PBV5   A0A3Q0IVG7   A0A3Q0IVE5   A0A1A9V6A8   A0A1B0BW42   A0A1A9ZZH1   A0A1B0GC55   A0A2A3EJZ3   A0A336MYE5   A0A1S4JE12   A0A3L8DES2   A0A0L7R956   A0A1A9X9N0   A0A3P9HFY1   A0A3B3TEV5   A0A3B3TEX0   A0A2D0QEV1   A0A2H8TYM4  

KEGG

101738132    no KO assigned | (RefSeq) suppressor APC domain-containing protein 2

GO

PANTHER

PTHR14907  

Length:

423

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00903

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00280

outside

1  -  423

 

 

Pi

250.215166

Theta

174.255789

Tajima's D

1.41332

CLR

0.60191

CSRT

0.765061746912654

Interpretation

Uncertain