Gene

KWMTBOMO01890  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA006198

Annotation

Uncharacterized_protein_OBRU01_08034_[Operophtera_brumata]

Location

Bomo_Chr4(+):7424859-7426246      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.058

CDS

ATGGCACTGTTCAGTGTGCTTCGTTTGAGGTTAAATAAAACTCTACCTGATTTAAGATCATCTCTTCGATTCTATTGTTCATCAACAGATAATGGACCCAATGAATCCGATGAGCAACCAGCGGTTGATCCTACTAAGGACAGGACCAAAGTTATTCCAGTCGAACAAAGTCTAAGATATTTGGCAAGTAAAGCGTATATGCATACCTACGGTGAAAATCCAGTGTGGCTATTATATCGGCGTAATCATAAAGGTGGTATACCTCCTAGAAAAACAAGGAAATCTTGTGTTAGAAACGGGATGATTTCAACAGGAAATCCTTGTCCTATTTGTAGAGATGAATATCTGGTACTAGATCACAGAAACACTAAGTTACTTCAACAATTCATTTCGAATTATACTGGACAGATTTTACAACCTTCAAAGACAGGCTTATGCCAGAAAAAACACAAAGAACTCTTGGTTGCTATTGAAAGAGCTTGGGACCAAGGTTTGCTTACATATGATGTACCATTCAGAGTATATGATTATTCAGTTTATAACAAAAGTACTGCATCCCACCAGAATTGA

Protein

MALFSVLRLRLNKTLPDLRSSLRFYCSSTDNGPNESDEQPAVDPTKDRTKVIPVEQSLRYLASKAYMHTYGENPVWLLYRRNHKGGIPPRKTRKSCVRNGMISTGNPCPICRDEYLVLDHRNTKLLQQFISNYTGQILQPSKTGLCQKKHKELLVAIERAWDQGLLTYDVPFRVYDYSVYNKSTASHQN

Uniprot

H9J9K5   A0A0L7LGY3   A0A2W1BV49   A0A2A4J6V4   A9XXB9   A0A212F0N5   + More
A0A194PRX6   A0A194R7B9   A0A2H1WS12   A0A1I8NN83   A0A1Y1M333   A0A1I8M6W7   B4N7R3   A0A1L8DRA0   A0A0M4ERY1   A0A1L8DRN3   A0A182P4V6   B4JQ97   A0A1B0DM12   A0A182F617   A0A182TMI8   A0A182IKD5   A0A084VNE0   A0A182V2F8   A0A2M3ZDF9   A0A1Q3FGM1   A0A182NTR8   A0A182Q2X1   Q7PNF3   A0A2M4CP20   A0A182T011   Q17JG5   A0A2M4ASQ7   A0A2M4ASK9   A0A2M4ASK5   A0A1S4F0E1   A0A2M4CM61   A0A182MJJ6   A0A2M4BY33   A0A2M4BY40   A0A2M4BXM8   A0A2M4CM63   W5JPH6   A0A2R7VRE8   A0A1B0G2F7   A0A1B0AH67   A0A1A9UD08   B4KEW1   T1DQ99   A0A1W4VYH6   K7IRH2   B4M9M5   A0A1A9WHG2   B0W7M9   D6WL77   A0A3B0KHV3   B3MKV8   B4GT62   B4PBI2   B4I638   A0A182JR63   B4QAH4   Q9VIN9   B3NKZ9   A0A182HUW9   B5DJR4   A0A0L0C4W9   A0A023EI94   A0A182WUA1   A0A1A9YRT4   A0A151K1Q8   A0A1B0AKN2   A0A1B0C695   A0A158NAS8   A0A195DLV0   A0A087T472   A0A195FSW2   A0A0L7RIA1   A0A1S3D9H1   A0A1B6CVR1   A0A0P4VQS4   A0A2S2QNE1   A0A026WR90   A0A1W4W425   E9FUV3   A0A182RC79   J9JTV8   A0A151X7M9   A0A088AAI2   A0A1D2NMJ5   A0A2A3E3K6   A0A2H8TR26   A0A226EZZ9   E2B898   A0A161MTK1   A0A2S2N8S1   A0A0P5T1H3   A0A0P5SB54   A0A0P5D765  

Pubmed

19121390    26227816    28756777    18154650    22118469    26354079    + More
28004739    25315136    17994087    24438588    12364791    14747013    17210077    17510324    20920257    23761445    20075255    18362917    19820115    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    26108605    24945155    21347285    24508170    30249741    21292972    27289101    20798317   

EMBL

BABH01004998    JTDY01001163    KOB74692.1    KZ149895    PZC78849.1    NWSH01002982    + More
PCG67152.1    EU016398    ABV68865.1    AGBW02011047    OWR47318.1    KQ459601    KPI93890.1    KQ460870    KPJ11766.1    ODYU01010624    SOQ55860.1    GEZM01045892    JAV77637.1    CH964214    EDW80402.1    GFDF01005088    JAV08996.1    CP012523    ALC40000.1    GFDF01005089    JAV08995.1    CH916372    EDV99077.1    AJVK01006815    AJVK01006816    ATLV01014737    KE524984    KFB39484.1    GGFM01005772    MBW26523.1    GFDL01008360    JAV26685.1    AXCN02000801    AAAB01008964    EAA12276.5    GGFL01002480    MBW66658.1    CH477232    EAT46875.1    GGFK01010441    MBW43762.1    GGFK01010442    MBW43763.1    GGFK01010440    MBW43761.1    GGFL01002252    MBW66430.1    AXCM01001558    GGFJ01008854    MBW57995.1    GGFJ01008838    MBW57979.1    GGFJ01008694    MBW57835.1    GGFL01002226    MBW66404.1    ADMH02000877    ETN64790.1    KK854016    PTY09411.1    CCAG010014651    CH933807    EDW11930.1    GAMD01002659    JAA98931.1    CH940654    EDW57901.1    DS231854    EDS38064.1    KQ971343    EFA04074.1    OUUW01000010    SPP85979.1    CH902620    EDV31639.1    CH479189    EDW25571.1    CM000158    EDW90496.1    CH480822    EDW55844.1    CM000361    CM002910    EDX05591.1    KMY91133.1    AE014134    AY075438    AAF53877.1    AAL68253.1    AAN11068.1    CH954179    EDV54577.1    APCN01002480    CH379061    EDY70537.1    JRES01000914    KNC27292.1    GAPW01004485    JAC09113.1    KQ976455    LKEW01001133    KYM85171.1    KYN45482.1    JXJN01026397    JXJN01026508    ADTU01010075    KQ980734    KYN13853.1    KK113338    KFM59911.1    KQ981305    KYN42994.1    KQ414585    KOC70523.1    GEDC01019883    JAS17415.1    GDRN01107010    JAI57489.1    GGMS01010054    MBY79257.1    KK107131    QOIP01000012    EZA58181.1    RLU15618.1    GL732525    EFX88791.1    ABLF02035395    KQ982446    KYQ56339.1    LJIJ01000005    ODN06457.1    KZ288444    PBC25681.1    GFXV01004841    MBW16646.1    LNIX01000001    OXA63132.1    GL446286    EFN88100.1    GEMB01000060    JAS03049.1    GGMR01000992    MBY13611.1    GDIQ01245615    GDIP01134761    LRGB01000868    JAK06110.1    JAL68953.1    KZS15488.1    GDIQ01098513    JAL53213.1    GDIP01165294    JAJ58108.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000095300    UP000095301    UP000007798    UP000092553    UP000075885    UP000001070    UP000092462    UP000069272    UP000075902    UP000075880    UP000030765    UP000075903    UP000075884    UP000075886    UP000007062    UP000075901    UP000008820    UP000075883    UP000000673    UP000092444    UP000092445    UP000078200    UP000009192    UP000192221    UP000002358    UP000008792    UP000091820    UP000002320    UP000007266    UP000268350    UP000007801    UP000008744    UP000002282    UP000001292    UP000075881    UP000000304    UP000000803    UP000008711    UP000075840    UP000001819    UP000037069    UP000076407    UP000092443    UP000078540    UP000092460    UP000005205    UP000078492    UP000054359    UP000078541    UP000053825    UP000079169    UP000053097    UP000279307    UP000192223    UP000000305    UP000075900    UP000007819    UP000075809    UP000005203    UP000094527    UP000242457    UP000198287    UP000008237    UP000076858   

PRIDE

H9J9K5    Q9VIN9   

Pfam

PF01084   Ribosomal_S18        + More
PF07992   Pyr_redox_2
PF18267   Rubredoxin_C

Interpro

IPR040054   MRPS18B        + More
IPR001648   Ribosomal_S18       
IPR036870   Ribosomal_S18_sf       
IPR023753   FAD/NAD-binding_dom       
IPR036188   FAD/NAD-bd_sf       
IPR041575   Rubredoxin_C       

SUPFAM

SSF46911   SSF46911        + More
SSF51905   SSF51905       

Gene 3D

4.10.640.10     3.50.50.60    

ProteinModelPortal

H9J9K5   A0A0L7LGY3   A0A2W1BV49   A0A2A4J6V4   A9XXB9   A0A212F0N5   + More
A0A194PRX6   A0A194R7B9   A0A2H1WS12   A0A1I8NN83   A0A1Y1M333   A0A1I8M6W7   B4N7R3   A0A1L8DRA0   A0A0M4ERY1   A0A1L8DRN3   A0A182P4V6   B4JQ97   A0A1B0DM12   A0A182F617   A0A182TMI8   A0A182IKD5   A0A084VNE0   A0A182V2F8   A0A2M3ZDF9   A0A1Q3FGM1   A0A182NTR8   A0A182Q2X1   Q7PNF3   A0A2M4CP20   A0A182T011   Q17JG5   A0A2M4ASQ7   A0A2M4ASK9   A0A2M4ASK5   A0A1S4F0E1   A0A2M4CM61   A0A182MJJ6   A0A2M4BY33   A0A2M4BY40   A0A2M4BXM8   A0A2M4CM63   W5JPH6   A0A2R7VRE8   A0A1B0G2F7   A0A1B0AH67   A0A1A9UD08   B4KEW1   T1DQ99   A0A1W4VYH6   K7IRH2   B4M9M5   A0A1A9WHG2   B0W7M9   D6WL77   A0A3B0KHV3   B3MKV8   B4GT62   B4PBI2   B4I638   A0A182JR63   B4QAH4   Q9VIN9   B3NKZ9   A0A182HUW9   B5DJR4   A0A0L0C4W9   A0A023EI94   A0A182WUA1   A0A1A9YRT4   A0A151K1Q8   A0A1B0AKN2   A0A1B0C695   A0A158NAS8   A0A195DLV0   A0A087T472   A0A195FSW2   A0A0L7RIA1   A0A1S3D9H1   A0A1B6CVR1   A0A0P4VQS4   A0A2S2QNE1   A0A026WR90   A0A1W4W425   E9FUV3   A0A182RC79   J9JTV8   A0A151X7M9   A0A088AAI2   A0A1D2NMJ5   A0A2A3E3K6   A0A2H8TR26   A0A226EZZ9   E2B898   A0A161MTK1   A0A2S2N8S1   A0A0P5T1H3   A0A0P5SB54   A0A0P5D765  

PDB

6GAZ     E-value=5.19577e-32,     Score=340

KEGG

101738004    K16174 small subunit ribosomal protein S18b, mitochondrial | (RefSeq) 28S ribosomal protein S18b, mi

GO

GO:0005840   GO:0032543   GO:0005739   GO:0003735   GO:0006412   GO:0016491   GO:0005763   GO:0016021   GO:0005622   GO:0003723   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634  

PANTHER

PTHR13329  

Length:

189

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00022

Exp number, first 60 AAs:

3e-05

Total prob of N-in:

0.03400

outside

1  -  189

 

 

Pi

292.586021

Theta

197.882635

Tajima's D

1.511481

CLR

0

CSRT

0.784310784460777

Interpretation

Uncertain