Silkworm Genome Informatics Database

Gene

KWMTBOMO01889

Pre Gene Modal

BGIBMGA005946

Annotation

PREDICTED:_centrosomin_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr4(-):7402853-7423158 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.305

CDS

ATGGCGGAGATAACATCTGAAATGTTAATTACAAGTCCTCGGAAGTTGCAAGAAATGGCGATGCCGTCAACTGAAGGTCACGATGTTACAAATATCAGTGGAATCAGCATGAAGCAGTATGAAGAACAGTTAAACGGATTGCGGAAGGAGAATTTTCACTTGAAATTGAGGATTTATTTTTTAGAAGAAAAACTCGGCAACGGATCCCCGCCCGCGGTACAAGGTCTCTTAGAGCACAACGTTCGATTACAAGTAGAAGTGGAAGAGTTACGACGGCAATTAACTGACAAGCAGGAGCTGCTCGCGGCCGCAGCTGAGGCCATCGACGTTCTAGAGCAGCAGGGTTCAGTCTCGACCGACAGTATGGAGGTGTCCATGAACAATAGCGCTTCGATGAAAAAGGCCGCCGATCCACATGACGAGACAACAGAGAAGCGGGACGCCGTCGACGATACGTGTGCGGAATCGGAGTCTGCAGGTGATTACTTAGCGGTGACAGTGAACAATGAGGATTTGGATGAACTCATGAAATTGAGACGCGAAAACCGTAAAGCTTTACAGATGATTAAAGGATGTATGAAAAAAATACAGCAGCAGGATAAAGAGATTAAGAAGATTAAATTGGATAAGGAATTGGCATACGCCCACATAAGTGACTCGCAGCTGGAGAAGTATGAAGAGATATTAAAGTGTAAAGATGAACACATCAGAGATTTGGAAATCAAGATTAAAGATTTGCAGAAGAACTTTGACACAACGCAACACTTTGAAAATTCAGGGAATCTTCAACAATTATTGACCCGACGACTACAAGGTCTTGCTTATTTCTTGGACAAATTACTGTCACACAAATGCGTGTTAGGTGAAGATAAGAAGAAATTAGCCGAAAGTATTCTTGAGCAAAGCTTAGCTCTACCTGTGGGACTAGAGCTAGACGAATCTATGGCTCCAGATGAACTAACAATGGACGAGAGTAACCTGGACATGTCGCAATCGATGAGAATTGAAGATTTGACCATGATGTTCGGACACCACGTAATGTGCAGCGAAGACAACAAGAATTTCACGTCGACAAAGATGCCGAAAAGGTTCCCCCCAGCAGACATGGTGTCCGAGTCGGAATGCTGGTCAGAGCCTGACAGAAAAGTATCTCTCGCTAGAGTCGGTCTCTGCGACACCGGCGTCGCCCTCGTACACTCCTCCTGTGAACTCAACAGAGCTCGCTACCGGAGAGCTAGAATCTCTCACGGATCTCGCTCCGAGGACACTAAGACTAATGACGTGGCCGTCATCGAAGAAATCGCTCAGCTCACTAAATACAACGAAAAATTGGAAGAGGACAATATTGACCTGCGCGGAAAACTTGAATCACTTAAAAAGCAAATTGAAGACCTAACTTCAGAAAACGACGAATTAAAATCGAATTTATCATCTGAACGTTTTAAATTATTGGAGGCAAACGACAATGAACAGGCTTTGAAAAAAACACTTGTAGGCTTAGAGCTACAGACGAAGGAAGTCGAACAAAAACTCGCCGAGGCCTTGCAAATGGCTGAGAGATTACGAAGCGAACGCCATGAACTAGAGGAGACGTTTGTGGAGACAGAACGTTCTCTGAGAAGAGCTGCCGATGAAGCCGCGGTGCAAGCCTCACAAGCCGCACTGGAACGCGCTAGAGCTCAACACGATAGATTACGTATCGAGAGAGAGTTAGATGAAACGAGAGAAAAATTGGTAACAGCCCTGGAAACCAATTCTCGGTTGGAAATCGAAGTTGCACGCAAAGTAGCCTTAGAAGTCGAAGAAGAAGTCCCCATTATGCCTCACGAAATTCATTTAGAAGACAGACCAACGTCTCCTGATCAAGGAATAGATAGCGACAGATTATCCAGTCTCGAACAGAATGACGCTATAGCTTTATCTCCACGTTCCTTGTATGAGGAAAATATTACTCTCAAACAAAAACTAGCAAGAACCAAGGCTACACTAGCTGAAACTCTCACACAGTTAAACGCCGCAAACTTACGGAAGAGGAGTGTTCAGCGCGCAATTTGTAGAGAGATACACAAAACTCAAGGTGTTCTACGGAAGGCCAGAGATCAGTTCGAAACTCATAGTAATATGTAA

Protein

MAEITSEMLITSPRKLQEMAMPSTEGHDVTNISGISMKQYEEQLNGLRKENFHLKLRIYFLEEKLGNGSPPAVQGLLEHNVRLQVEVEELRRQLTDKQELLAAAAEAIDVLEQQGSVSTDSMEVSMNNSASMKKAADPHDETTEKRDAVDDTCAESESAGDYLAVTVNNEDLDELMKLRRENRKALQMIKGCMKKIQQQDKEIKKIKLDKELAYAHISDSQLEKYEEILKCKDEHIRDLEIKIKDLQKNFDTTQHFENSGNLQQLLTRRLQGLAYFLDKLLSHKCVLGEDKKKLAESILEQSLALPVGLELDESMAPDELTMDESNLDMSQSMRIEDLTMMFGHHVMCSEDNKNFTSTKMPKRFPPADMVSESECWSEPDRKVSLARVGLCDTGVALVHSSCELNRARYRRARISHGSRSEDTKTNDVAVIEEIAQLTKYNEKLEEDNIDLRGKLESLKKQIEDLTSENDELKSNLSSERFKLLEANDNEQALKKTLVGLELQTKEVEQKLAEALQMAERLRSERHELEETFVETERSLRRAADEAAVQASQAALERARAQHDRLRIERELDETREKLVTALETNSRLEIEVARKVALEVEEEVPIMPHEIHLEDRPTSPDQGIDSDRLSSLEQNDAIALSPRSLYEENITLKQKLARTKATLAETLTQLNAANLRKRSVQRAICREIHKTQGVLRKARDQFETHSNM

Uniprot

H9J8V4 A0A2A4J596 A0A2W1C154 A0A2H1WN04 A0A194PKC6 A0A194R3F0 + More
A0A212F0P5 S4PMK9 A0A0L7LGX7 A0A1E1WVB7

Pubmed

19121390 28756777 26354079 22118469 23622113 26227816 + More

EMBL

BABH01004997 BABH01004998 NWSH01002982 PCG67151.1 KZ149895 PZC78850.1 + More
ODYU01009731 SOQ54356.1 KQ459601 KPI93891.1 KQ460870 KPJ11765.1 AGBW02011047 OWR47319.1 GAIX01003500 JAA89060.1 JTDY01001163 KOB74687.1 GDQN01000126 JAT90928.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000007151 UP000037510 + More

PRIDE

H9J8V4

Pfam

PF07989 Cnn_1N

Interpro

IPR012943 Cnn_1N

ProteinModelPortal

H9J8V4 A0A2A4J596 A0A2W1C154 A0A2H1WN04 A0A194PKC6 A0A194R3F0 + More
A0A212F0P5 S4PMK9 A0A0L7LGX7 A0A1E1WVB7

KEGG

101737784 K16718 centrosomin | (RefSeq) centrosomin

GO

GO:0005815 GO:0000166 GO:0003676 GO:0000398 GO:0003723 GO:0043401 GO:0003677 GO:0003707 GO:0004651 GO:0005634

Length:

708

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1 - 708

Pi

293.732357

Theta

194.643472

Tajima's D

1.848094

CLR

0.231655

CSRT

0.857107144642768

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics