SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01881  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006193
Annotation
DnaJ-9_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.77
 

Sequence

CDS
ATGGCAGAGTCGGAAGTTCTTGATTTAGATTTAAACATTGAAGATCTTGTACCCAAAAGCCCGGAGAGCCTGGCTGAAGAAAAAAAAGACAGTGGTAATTATTTATATAAGTTTAAAAATTACAAAGGAGCATTGGCTATGTATGATGAAGCCATAAAACTGTGCCCAGAAAATGCAGCATATTATGGCAACAGATCTGCATGTTACATGATGCTATGCATGTATAAGAAGGCTCTTGAAGATGCACAGAAAGCTGTATCATTGGATCCGACATTCACCAAAGGATACATACGGGCTGCGAAATGTTGTATTGCGTTAGGAGATCTATTAAATGGTGAGCAAGCTGTTCGACGGGCCACTGAGTTAGGTGGTGTTGAGTGTGTTAGTGGTGAATTGCGGGCATTGGAAACACTCAAACGGTTACATGAAGATGCCCAGCGTGCCCTTGATGCTAATGATTATCGACGTGTAGTGTTCTGTATGGACCGTTGCCTAGACTACAGCCCCTCTTGCACCAAATGTAAACTGACAAAAGCTGAATGCTTAGCGTTGCTAGGACGCTGCCAGGAAGCCCAGGAGATTGCTAATGATTTACTACGACTTGATAGTCAGGATACAGAGGCTATATACGTCAGGGGACTATGTTTGTATTTTGAAGACAGAGACGAACAAGCGTTTAAACACTTTCAACAAGTATTGCGTCTCAATCCAGATCATAAGAAAGCTGTGGAAACCTACAAGAGAGCTAAACTATTAAAACAAAAGAAAGAAGAAGGTAATGAAGCTTTCAAAATGGGACGCTGGCAACAAGCTCTAGCACTTTACAACGAAGCGTTAACTATAGACAAAAACAACAGGACCGTCAATGCCAAGCTCCACTTCAACAAGGCCACCGTCTGTGCGAAGCTGAACATGCTCAATGAAACCGCCGAAGCGTGCACCGCTGCCCTCGAACTCGACGAAAACTACGTAAAGGCTCTTCTGAGACGAGCCAAATGCTACACGGAGCTCGGCGAATACGAGGAGGCCGTTAAAGACTACGAAAGACTGTACAAGATCGATAAGAGCAAACAAACCAAACAGTTGCTGCACGAGGCCAAGATGGCGCTGAAGAGATCGAAACGTAAAGATTATTACAAAATCCTTGGTGTCGACAAGAGTGCTTCAACAGACGACATTAAAAAGGCGTATAGGAAACGCGCTTTAGTCCATCATCCGGACAGACACGCCAGCGCCACAGAGGTGGAACGTCGCGAGCAGGAGCGTCGCTTCAAGGAAATAGGAGAAGCCTACGGCATCCTTAGCGATCCCAAGAAACGTAAACGCTACGACGACGGACACGACCTCCATGATGACGGCGCAGGAATGAGTGATATCGACCCTAATGTAGTATTCCAGTCCTTCTTCGGAGGTAATCGGCCGCAATTCGATTTCCACTCCGGTAGCAGTTTCCCAGGCTCTGCGTTCAGTTTCCAATTTGGATAA
Protein
MAESEVLDLDLNIEDLVPKSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVECVSGELRALETLKRLHEDAQRALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVRGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNAKLHFNKATVCAKLNMLNETAEACTAALELDENYVKALLRRAKCYTELGEYEEAVKDYERLYKIDKSKQTKQLLHEAKMALKRSKRKDYYKILGVDKSASTDDIKKAYRKRALVHHPDRHASATEVERREQERRFKEIGEAYGILSDPKKRKRYDDGHDLHDDGAGMSDIDPNVVFQSFFGGNRPQFDFHSGSSFPGSAFSFQFG

Summary

EMBL
DQ311264    FJ592082    FJ592087    ABD36209.1    ACT34043.1    ACV41273.1    + More
BABH01004989    BABH01004990    JN872884    AFC01223.1    ODYU01007836    SOQ50952.1    KZ150033    PZC74687.1    NWSH01002168    PCG68994.1    KQ459601    KPI93900.1    KQ460870    KPJ11757.1    AGBW02011047    OWR47327.1    GAIX01003819    JAA88741.1    NEVH01019965    PNF22124.1    KQ971343    EFA04042.1    KK852415    KDR24362.1    APGK01032734    KB740848    KB631797    ENN78715.1    ERL86214.1    BT127198    AEE62160.1    GEBQ01009468    JAT30509.1    GBBI01000832    JAC17880.1    GDKW01002161    JAI54434.1    GBGD01001250    JAC87639.1    GL451493    EFN79223.1    GECL01001405    JAP04719.1    GEDC01006245    JAS31053.1    GEZM01098622    JAV53828.1    GAHY01002116    JAA75394.1    GFJQ02003705    JAW03265.1    LJIG01022600    KRT79713.1    KK107105    QOIP01000011    EZA59512.1    RLU17202.1    GGLE01002004    MBY06130.1    GL888406    EGI61505.1    ADTU01018891    ADTU01018892    KQ976439    KYM86754.1    KQ980886    KYN11879.1    GFWV01019985    MAA44713.1    KQ981693    KYN37830.1    NNAY01002842    OXU20454.1    KQ977862    KYM99262.1    JTDY01001274    KOB74324.1    GDIP01149734    JAJ73668.1    GDIQ01270259    JAJ81465.1    GDIQ01184553    JAK67172.1    GDIP01254359    JAI69042.1    KQ435718    KOX78956.1    GDIQ01184552    JAK67173.1    KQ982805    KYQ50521.1    GDIQ01245881    JAK05844.1    LRGB01002101    KZS09171.1    GDIP01143531    JAJ79871.1    GDIQ01028804    JAN65933.1    GECU01020357    JAS87349.1    GDIQ01187801    JAK63924.1    GDIP01151320    JAJ72082.1    GDIP01054790    JAM48925.1    GDIP01010627    JAM93088.1    HACA01001848    CDW19209.1    GDIP01055993    JAM47722.1    PZQS01000001    PVD39415.1    HACA01001849    CDW19210.1    GDIP01184226    JAJ39176.1    JH431251    GEFM01003748    JAP72048.1    GBYB01012117    JAG81884.1    GBHO01042157    GBHO01042155    GBRD01011485    GBRD01011483    JAG01447.1    JAG01449.1    JAG54339.1    CH954179    EDV56624.1    JR038269    AEY58189.1    KZ288266    PBC30208.1    CH902620    EDV32546.2    CH940649    EDW64408.1    AF199022    AE014134    AAF43627.1    AAF53540.1    AGB93036.1    JRES01001507    KNC22404.1    GEGO01000862    JAR94542.1    CM000361    EDX05228.1    CM002910    KMY90527.1    BT001725    AAN71480.1    GAKP01014965    GAKP01014964    JAC43988.1    CH379060    EAL33981.1    OUUW01000004    SPP79374.1    BT080661    ACO15085.1    CH933807    EDW11661.2    CH916379    EDV94179.1    GFPF01007366    MAA18512.1    GEDV01006322    JAP82235.1    GBXI01009747    JAD04545.1    KA646523    AFP61152.1    GBHO01042154    GBHO01042153    JAG01450.1    JAG01451.1    GACK01008073    JAA56961.1    KPU74029.1    KQS62947.1    KRF81612.1    KRT04372.1    GDHF01029254    JAI23060.1    SPP79376.1    CH963920    EDW77862.1    SPP79375.1   
Pfam
PF00226   DnaJ        + More
PF07719   TPR_2
PF13174   TPR_6
PF13181   TPR_8
PF00515   TPR_1
PF17874   TPR_MalT
PF10197   Cir_N
PF12542   CWC25
Interpro
IPR001623   DnaJ_domain        + More
IPR013105   TPR_2       
IPR036869   J_dom_sf       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR013026   TPR-contain_dom       
IPR018253   DnaJ_domain_CS       
IPR001440   TPR_1       
IPR041617   TPR_MalT       
IPR022209   CWC25       
IPR019339   CIR_N_dom       
SUPFAM
SSF46565   SSF46565        + More
SSF48452   SSF48452       
Gene 3D
PDB
2Y4U     E-value=3.72695e-27,     Score=303

Ontologies

Topology

Length:
494
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00046
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.00068
outside
1  -  494
 
 

Population Genetic Test Statistics

Pi
208.822266
Theta
161.026828
Tajima's D
0.591292
CLR
0.415854
CSRT
0.545322733863307
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号