Gene

KWMTBOMO01878  Validated by peptides from experiments

Annotation

coiled-coil_domain_containing_25_protein_[Bombyx_mori]

Location

Bomo_Chr4(-):7291291-7293268      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.046 Nuclear   Reliability : 2.438

CDS

ATGGTGTTCTATTTTACAAGTAGTGTTGTATCTCCCCCAGTTACACTGTTTATGGGAGCCGACAAAAACGAAAATGAAGACTTAATAAAATGGGGTTGGCCAGAGGATGTCTGGTTTCATGTTGACAAAGTATCATCTGCACATGTATATTTAAGACTTACTCCTGGTCAAACGATTGATGATATACCTAATTTAGTTCTTGATGATGCTTGCCAGCTGGTCAAAGCAAATTCCATTTTAGGCAATAAAATGAATGACATAGACATAGTTTATACAATGTGGTCAAATTTGAAGAAGACTGCTGGAATGGAGGTTGGACAAGTAGCATTCCATAAAGACAGAGAAGTAAGAAAGGCGAAAGTGGCCAAAAGAAATAATGAAATAGTAAATAGGCTGAATAAAACAAAAACAGAATCATTTCCAGACCTCAGACAAGAAAGAGAGAATCGAGATAGATTAGAGAGAGAAGATAAAAAGAAAGTTTTAAGAGAAAAAAAGGAGAAAGAGAAAGAAGAAGAAAAACGAAAAAAGGAAGAGGCAGAACTCAGAAGCTACTCTACATTAATGAAAGCGGAAAATATGTCCACTAACTATGATGGTAATGATTCCGATGATTTTATGTGA

Protein

MVFYFTSSVVSPPVTLFMGADKNENEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTIDDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEIVNRLNKTKTESFPDLRQERENRDRLEREDKKKVLREKKEKEKEEEKRKKEEAELRSYSTLMKAENMSTNYDGNDSDDFM

Similarity

Belongs to the peptidase C2 family.

Uniprot

Q2F6C5   A0A2A4JG36   A0A2W1BSH6   A0A2H1WDB8   A0A194R230   A0A194PRZ2   + More
A0A212F0V4   S4P9Q4   A0A0L7LIC1   A0A0P4VN21   R4FN45   A0A1B0CNH1   A0A1B6GQW5   A0A023EIG3   A0A023EJK7   A0A224XPC9   A0A1B6JH59   A0A182QU94   T1DNU5   A0A182TR81   W5J5V5   A0A1W4WXB4   A0A1B6LGF9   A0A2M3ZAH8   A0A2M4BZM8   Q16RD5   A0A182WVN4   A0A182I9B3   A0A182UX66   A0A182KXM5   Q7PQG6   A0A182JC92   B0X9K9   A0A084VW18   A0A182VXJ3   A0A1L8DAG1   A0A0K8TNB0   D6WKP3   A0A182T0G5   A0A336KM95   A0A182F804   A0A2M4APA0   A0A182KDZ5   U5EWE4   A0A182LT59   A0A182YIA8   A0A1Q3F3Y3   R4WT77   A0A182REV9   A0A1B6DHV3   A0A1Y1LW75   A0A146LH06   A0A0A9WRJ3   J3JV33   A0A182P903   A0A2J7QPN8   A0A0L0CIQ3   A0A1B0DKS3   A0A067RHM0   A0A131XLD7   E2ALT8   A0A023FJB1   A0A023FV84   A0A1E1XAP0   A0A224Y5B2   A0A131Z117   A0A023GFZ9   G3MML0   A0A1W7RAS3   A0A2P8Z968   A0A1Z5KYC7   F4W4F2   E2BAA5   A0A195EZ57   E0VL05   E9JC10   B7QCK4   A0A0K8RKU3   A0A195CD31   A0A293MU14   L7LU44   A0A2R5LDV2   A0A195DP35   A0A026W2B0   D3PHY0   A0A210PI60   A0A0P4W8E9   A0A151WZB8   C1BUX8   R7VC91   A0A3B0K5M5   A0A0K8VQH7   C1C271   B4N275   A0A034UZ34   A0A0C9RCF8   A0A1W4UVF8  

Pubmed

28756777    26354079    22118469    23622113    26227816    27129103    + More
24945155    20920257    23761445    17510324    20966253    12364791    14747013    17210077    24438588    26369729    18362917    19820115    25244985    23691247    28004739    26823975    25401762    22516182    23537049    26108605    24845553    28049606    20798317    28503490    28797301    26830274    22216098    29403074    28528879    21719571    20566863    21282665    25576852    24508170    28812685    23254933    17994087    25348373   

EMBL

DQ311147    ABD36092.1    NWSH01001584    PCG70789.1    KZ150033    PZC74683.1    + More
ODYU01007836    SOQ50956.1    KQ460870    KPJ11752.1    KQ459601    KPI93905.1    AGBW02011047    OWR47331.1    GAIX01003654    JAA88906.1    JTDY01001018    KOB75114.1    GDKW01002322    JAI54273.1    GAHY01000708    JAA76802.1    AJWK01020303    GECZ01004943    JAS64826.1    GAPW01004395    JAC09203.1    GAPW01004396    JAC09202.1    GFTR01003492    JAW12934.1    GECU01014278    GECU01009294    JAS93428.1    JAS98412.1    AXCN02000282    GAMD01002570    JAA99020.1    ADMH02002036    ETN59827.1    GEBQ01017259    JAT22718.1    GGFM01004761    MBW25512.1    GGFJ01009385    MBW58526.1    CH477716    CH477673    EAT36970.1    EAT37432.1    APCN01003250    AAAB01008888    EAA08860.5    DS232541    EDS43178.1    ATLV01017375    KE525164    KFB42162.1    GFDF01010631    JAV03453.1    GDAI01001726    JAI15877.1    KQ971342    EFA03024.1    UFQS01000259    UFQT01000259    SSX02160.1    SSX22537.1    GGFK01009241    MBW42562.1    GANO01000617    JAB59254.1    AXCM01003824    GFDL01012769    JAV22276.1    AK417932    BAN21147.1    GEDC01019908    GEDC01012032    JAS17390.1    JAS25266.1    GEZM01048418    GEZM01048417    JAV76580.1    GDHC01012402    JAQ06227.1    GBHO01034521    GBRD01016253    JAG09083.1    JAG49573.1    APGK01044117    BT127099    KB741020    KB631628    AEE62061.1    ENN75120.1    ERL84835.1    NEVH01012088    PNF30523.1    JRES01000340    KNC32130.1    AJVK01068349    KK852678    KDR18662.1    GEFH01000618    JAP67963.1    GL440629    EFN65608.1    GBBK01003734    JAC20748.1    GBBL01001926    JAC25394.1    GFAC01002870    JAT96318.1    GFPF01000759    MAA11905.1    GEDV01003433    JAP85124.1    GBBM01002571    JAC32847.1    JO843111    AEO34728.1    GFAH01000138    JAV48251.1    PYGN01000141    PSN53046.1    GFJQ02006915    JAW00055.1    GL887532    EGI70847.1    GL446696    EFN87360.1    KQ981905    KYN33590.1    DS235263    EEB14061.1    GL771642    EFZ09634.1    ABJB010197797    ABJB010859757    DS908087    EEC16576.1    GADI01002096    GEFM01005425    JAA71712.1    JAP70371.1    KQ977935    KYM98712.1    GFWV01019268    MAA43996.1    GACK01010660    JAA54374.1    GGLE01003523    MBY07649.1    KQ980713    KYN14249.1    KK107483    EZA50133.1    BT121236    HACA01018088    ADD38166.1    CDW35449.1    NEDP02076665    OWF36175.1    GDRN01064932    GDRN01064931    JAI64761.1    KQ982649    KYQ53107.1    BT078407    ACO12831.1    AMQN01019122    KB295338    ELU13300.1    OUUW01000021    SPP89504.1    GDHF01011211    JAI41103.1    BT080950    ACO15374.1    CH963925    EDW78464.1    GAKP01022731    JAC36221.1    GBYB01010762    JAG80529.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    UP000092461    + More
UP000075886    UP000075902    UP000000673    UP000192223    UP000008820    UP000076407    UP000075840    UP000075903    UP000075882    UP000007062    UP000075880    UP000002320    UP000030765    UP000075920    UP000007266    UP000075901    UP000069272    UP000075881    UP000075883    UP000076408    UP000075900    UP000019118    UP000030742    UP000075885    UP000235965    UP000037069    UP000092462    UP000027135    UP000000311    UP000245037    UP000007755    UP000008237    UP000078541    UP000009046    UP000001555    UP000078542    UP000078492    UP000053097    UP000242188    UP000075809    UP000014760    UP000268350    UP000007798    UP000192221   

PRIDE

Q2F6C5    G3MML0    L7LU44   

Pfam

PF05670   NFACT-R_1        + More
PF00648   Peptidase_C2

Interpro

IPR039730   Jlp2/Ccd25        + More
IPR008532   NFACT_RNA-bd       
IPR036213   Calpain_III_sf       
IPR001300   Peptidase_C2_calpain_cat       
IPR038765   Papain-like_cys_pep_sf       

SUPFAM

SSF54001   SSF54001        + More
SSF49758   SSF49758       

ProteinModelPortal

Q2F6C5   A0A2A4JG36   A0A2W1BSH6   A0A2H1WDB8   A0A194R230   A0A194PRZ2   + More
A0A212F0V4   S4P9Q4   A0A0L7LIC1   A0A0P4VN21   R4FN45   A0A1B0CNH1   A0A1B6GQW5   A0A023EIG3   A0A023EJK7   A0A224XPC9   A0A1B6JH59   A0A182QU94   T1DNU5   A0A182TR81   W5J5V5   A0A1W4WXB4   A0A1B6LGF9   A0A2M3ZAH8   A0A2M4BZM8   Q16RD5   A0A182WVN4   A0A182I9B3   A0A182UX66   A0A182KXM5   Q7PQG6   A0A182JC92   B0X9K9   A0A084VW18   A0A182VXJ3   A0A1L8DAG1   A0A0K8TNB0   D6WKP3   A0A182T0G5   A0A336KM95   A0A182F804   A0A2M4APA0   A0A182KDZ5   U5EWE4   A0A182LT59   A0A182YIA8   A0A1Q3F3Y3   R4WT77   A0A182REV9   A0A1B6DHV3   A0A1Y1LW75   A0A146LH06   A0A0A9WRJ3   J3JV33   A0A182P903   A0A2J7QPN8   A0A0L0CIQ3   A0A1B0DKS3   A0A067RHM0   A0A131XLD7   E2ALT8   A0A023FJB1   A0A023FV84   A0A1E1XAP0   A0A224Y5B2   A0A131Z117   A0A023GFZ9   G3MML0   A0A1W7RAS3   A0A2P8Z968   A0A1Z5KYC7   F4W4F2   E2BAA5   A0A195EZ57   E0VL05   E9JC10   B7QCK4   A0A0K8RKU3   A0A195CD31   A0A293MU14   L7LU44   A0A2R5LDV2   A0A195DP35   A0A026W2B0   D3PHY0   A0A210PI60   A0A0P4W8E9   A0A151WZB8   C1BUX8   R7VC91   A0A3B0K5M5   A0A0K8VQH7   C1C271   B4N275   A0A034UZ34   A0A0C9RCF8   A0A1W4UVF8  

KEGG

692794    no KO assigned | (RefSeq) ccdc25; coiled-coil domain containing 25 protein

GO

GO:0004198  

PANTHER

PTHR13049  

Length:

207

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03442

Exp number, first 60 AAs:

0.03397

Total prob of N-in:

0.03887

outside

1  -  207

 

 

Pi

309.71329

Theta

218.768042

Tajima's D

1.316535

CLR

0

CSRT

0.746812659367032

Interpretation

Uncertain