Gene

KWMTBOMO01874

Pre Gene Modal

BGIBMGA005953

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):7180951-7189968      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.339 Cytoskeletal   Reliability : 1.554 Nuclear   Reliability : 1.674

CDS

ATGTCTGTTCGAGCGTTACCTCCGGAGTTAGCAGAAAAAGCCCGCAAAGAGTTAAATGAAGATCCAAGCAGGATTAATAGTGACATTCAACACTTAAAGGACTGGTTGTCCAAACAGCCACATTTACGCGCTAGGACAGACGATCAATGGCTATTATCATTTCTACGAGGATGCAAGTTCAGCTTGGAAAGGACAAAGGAAAAATTAGATTTATATTATTCCGTTCGTACAACTGCACCAGAATTATTCAGTATCAAACCGAGCAATCCATTATTTGATGAAATATTAAGTTTGGGGGCAATATTGGTATTACCTAAGACTGCAACTTCTGATTCTCCACGTGTCAGTATAATCATACCTGGCCGATATGATGCTGATAAGTACAATATTTCCGATGTCATGGCTGTATCTTTAGTCTTACAAAAGATTATTATGATGGAAGACGACAACGCAATGGTTGCCGGCATTTTGTCAATTTTAGATTTAGATACTGTAAAAATAGGTCATTTATTACAAATGACTCCAATGTTCTTGAAAAAAATGGTGGTTGCTTCTCAGGACGCATTACCAGTTCGACTCAAAGGTACCCATTATTTAAATACTCCGACAGGATTCGAAACTGTTTTCAATGCTGTAAAAGCATTACTGAACGAAAAAAATAAGAAACGCCTCTACGTCCACAACCAGAATTATGAAGAGATGTACAAATATATCCCTAAGGACATTTTACCAGTAGAATATGGCGGGAACGGTGGTTCTATTGAAGAAATTATAGATTACTGGAAGAAAAAAGTAAAGGAATACAGTGACTGGTTGGAAGAAGATGATCAATATGGTACGGACGAGTCCAAGCGACCAGGGAAACCGAAGACCGCTGAGGATATGTTCGGGGTCGAGGGATCCTTCAGGCAACTTGAATTCGATTAA

Protein

MSVRALPPELAEKARKELNEDPSRINSDIQHLKDWLSKQPHLRARTDDQWLLSFLRGCKFSLERTKEKLDLYYSVRTTAPELFSIKPSNPLFDEILSLGAILVLPKTATSDSPRVSIIIPGRYDADKYNISDVMAVSLVLQKIIMMEDDNAMVAGILSILDLDTVKIGHLLQMTPMFLKKMVVASQDALPVRLKGTHYLNTPTGFETVFNAVKALLNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNGGSIEEIIDYWKKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDMFGVEGSFRQLEFD

Uniprot

H9J8W1   H9J8W2   A0A194R1T7   A0A1E1W1H6   A0A2A4JH87   A0A2H4RMP4   + More
A0A2H1WW13   A0A194PME6   A0A194PRZ7   A0A194R225   A0A2H4RMN9   A0A212F0Q8   A0A194PKE4   A0A194PLN6   A0A0L7KQJ3   A0A194R7A0   A0A2A4IU45   A0A212F6T3   A0A2A4ISF2   A0A212F6S7   A0A2W1BIJ4   A0A1W7R8C4   A0A1L8DZG8   A0A1L8DZ17   A0A1B0GLZ3   Q16Z99   A0A1B0CUX6   T1E7Q0   Q16ZA0   W5JVC8   A0A182VM76   A0A182KT05   A0A182UMQ1   A0A182KT08   A0A182U0Q4   A0A084WB39   A0A182UHL4   A0A182J0U4   A0A0T6ATJ8   A0A336K545   Q5TMY7   A0A182FW74   A0A182MLC5   A0A182KD53   A0A2H1WW03   A0A182QZB3   W5JX38   A0A182QP18   A0A182PGB9   A0A182HPS1   A0A182X007   A0A194PLP1   A0A194R3C9   A0A182RXC9   A0A182WD92   A0A2H4RMV4   A0A1B0CVS3   A0A182LZL5   A0A182MXC3   A0A2H1WW22   A0A2M4CYG7   A0A1Q3G2T7   A0A182YQ85   A0A2W1BP80   A0A084WB40   A0A2A4IT19   A0A2A4JCS0   A0A0K8TNI0   A0A182IQP8   A0A1J1HGT4   A0A194PKQ7   A0A1J1HK45   B0X6S5   A0A2W1BN19   A0A2H4RMP0   A0A1W4W5W2   A0A0M4ELC6   A0A1E1WUN0   B3M540   B4PD52   A0A336M9G9   A8E768   Q2MGL8   A0A336M2D4   A0A0J9RMX9   A0A2H4RMP2   A0A1E1WRB4   A0A0A1WU57   B4LG89   B3NJG4   B5DR79   B4H5J4   A0A1I8Q731   B4MXY4   A0A034WM90   A0A0T6ATN3   A0A0A1XDP4   A0A3B0K9H1   B3ME36   A0A1L8DZ63  

Pubmed

19121390    26354079    29136137    22118469    26227816    28756777    + More
17510324    20920257    23761445    20966253    24438588    12364791    25244985    26369729    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    25830018    15632085    25348373    18057021   

EMBL

BABH01004969    BABH01004970    BABH01004971    KQ460870    KPJ11748.1    GDQN01010231    + More
GDQN01007468    GDQN01002291    GDQN01001042    JAT80823.1    JAT83586.1    JAT88763.1    JAT90012.1    NWSH01001584    PCG70793.1    MG434598    ATY51904.1    ODYU01011491    SOQ57250.1    KQ459601    KPI93909.1    KPI93910.1    KPJ11747.1    MG434597    ATY51903.1    AGBW02011047    OWR47335.1    KPI93911.1    KPI93908.1    JTDY01007407    KOB65224.1    KPJ11746.1    NWSH01007555    PCG62918.1    AGBW02009977    OWR49434.1    PCG62917.1    OWR49433.1    KZ150033    PZC74678.1    GEHC01000255    JAV47390.1    GFDF01002409    JAV11675.1    GFDF01002408    JAV11676.1    AJVK01009188    CH477495    EAT39961.1    AJWK01029765    GAMD01002852    JAA98738.1    EAT39960.1    ADMH02000337    ETN66915.1    ATLV01022312    KE525331    KFB47433.1    LJIG01022828    KRT78512.1    UFQS01000124    UFQT01000124    SSX00096.1    SSX20476.1    AAAB01008986    EAA43295.4    AXCM01009708    AXCM01009709    SOQ57249.1    AXCN02001683    ADMH02000039    ETN68020.1    APCN01003270    KPI93913.1    KPJ11745.1    MG434653    ATY51959.1    AJWK01031086    SOQ57248.1    GGFL01006202    MBW70380.1    GFDL01000931    JAV34114.1    PZC74676.1    KFB47434.1    PCG62915.1    NWSH01002089    PCG69222.1    GDAI01001910    JAI15693.1    CVRI01000002    CRK86620.1    KPI93912.1    CRK86617.1    DS232422    EDS41596.1    PZC74677.1    MG434599    ATY51905.1    CP012525    ALC44235.1    GDQN01000407    JAT90647.1    CH902618    EDV39519.1    CM000159    EDW92800.1    UFQT01000743    SSX26885.1    BT031010    ABV82392.1    AE014296    ABC66124.1    UFQS01000428    UFQT01000428    SSX03855.1    SSX24220.1    CM002912    KMY96769.1    MG434600    ATY51906.1    GDQN01002421    GDQN01002105    GDQN01001504    JAT88633.1    JAT88949.1    JAT89550.1    GBXI01012237    JAD02055.1    CH940647    EDW69397.1    CH954178    EDV50126.2    CH379070    EDY73939.1    CH479211    EDW33046.1    CH963876    EDW76973.1    GAKP01004049    JAC54903.1    KRT78511.1    GBXI01005210    JAD09082.1    OUUW01000009    SPP84770.1    CH902619    EDV35431.1    KPU75643.1    GFDF01002350    JAV11734.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000007151    UP000037510    + More
UP000092462    UP000008820    UP000092461    UP000000673    UP000075903    UP000075882    UP000075902    UP000030765    UP000075880    UP000007062    UP000069272    UP000075883    UP000075881    UP000075886    UP000075885    UP000075840    UP000076407    UP000075900    UP000075920    UP000075884    UP000076408    UP000183832    UP000002320    UP000192221    UP000092553    UP000007801    UP000002282    UP000000803    UP000008792    UP000008711    UP000001819    UP000008744    UP000095300    UP000007798    UP000268350   

PRIDE

H9J8W1    H9J8W2    Q2MGL8   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036865   CRAL-TRIO_dom_sf        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       
IPR001251   CRAL-TRIO_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9J8W1   H9J8W2   A0A194R1T7   A0A1E1W1H6   A0A2A4JH87   A0A2H4RMP4   + More
A0A2H1WW13   A0A194PME6   A0A194PRZ7   A0A194R225   A0A2H4RMN9   A0A212F0Q8   A0A194PKE4   A0A194PLN6   A0A0L7KQJ3   A0A194R7A0   A0A2A4IU45   A0A212F6T3   A0A2A4ISF2   A0A212F6S7   A0A2W1BIJ4   A0A1W7R8C4   A0A1L8DZG8   A0A1L8DZ17   A0A1B0GLZ3   Q16Z99   A0A1B0CUX6   T1E7Q0   Q16ZA0   W5JVC8   A0A182VM76   A0A182KT05   A0A182UMQ1   A0A182KT08   A0A182U0Q4   A0A084WB39   A0A182UHL4   A0A182J0U4   A0A0T6ATJ8   A0A336K545   Q5TMY7   A0A182FW74   A0A182MLC5   A0A182KD53   A0A2H1WW03   A0A182QZB3   W5JX38   A0A182QP18   A0A182PGB9   A0A182HPS1   A0A182X007   A0A194PLP1   A0A194R3C9   A0A182RXC9   A0A182WD92   A0A2H4RMV4   A0A1B0CVS3   A0A182LZL5   A0A182MXC3   A0A2H1WW22   A0A2M4CYG7   A0A1Q3G2T7   A0A182YQ85   A0A2W1BP80   A0A084WB40   A0A2A4IT19   A0A2A4JCS0   A0A0K8TNI0   A0A182IQP8   A0A1J1HGT4   A0A194PKQ7   A0A1J1HK45   B0X6S5   A0A2W1BN19   A0A2H4RMP0   A0A1W4W5W2   A0A0M4ELC6   A0A1E1WUN0   B3M540   B4PD52   A0A336M9G9   A8E768   Q2MGL8   A0A336M2D4   A0A0J9RMX9   A0A2H4RMP2   A0A1E1WRB4   A0A0A1WU57   B4LG89   B3NJG4   B5DR79   B4H5J4   A0A1I8Q731   B4MXY4   A0A034WM90   A0A0T6ATN3   A0A0A1XDP4   A0A3B0K9H1   B3ME36   A0A1L8DZ63  

PDB

3W68     E-value=7.63014e-26,     Score=290

KEGG

101743129    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0008270   GO:0043565   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634  

Length:

308

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06562

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00569

outside

1  -  308

 

 

Pi

322.046213

Theta

163.555331

Tajima's D

2.046134

CLR

0.284292

CSRT

0.888555572221389

Interpretation

Uncertain