Gene

KWMTBOMO01872

Pre Gene Modal

BGIBMGA005955

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Amyelois_transitella]

Location

Bomo_Chr4(-):7158661-7168238      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.595 PlasmaMembrane   Reliability : 1.14

CDS

ATGATACGTGAGCTTCCAGAGGAATTGGCTAAAATAGCTAAAGACGAGTTGAACGAGAATCCAGAACGTGTAAGTGAAGATTTAATGTACGTCAAAGACTGGATTGAACAACAACCGCATTTGAGGGCTAGAAAAGACGACCAATGGCTTGTGGCAATACTCAGAGGATGCAAATATAATTTTGAGAAAGTGAAAAAGAAATTGGATTTGTACTACACGTTGAGGACAACAGCCCCAGACGTAACGTTAAGACACAGACCTTTGGGACCGGATTTCTTAAATTTCTTTCGACTGGGCACCTGTCTGTTACTACCCAAGCCAAAGGACCAGATATATCCACGAGTCATTCTTATCAGAGCGGGAGTCTATAATCCTGAGACGAATAATGTGATCGATATAATGTGTATATTATATTATGTAGTTCAGATAGCAATAATAGAAGATGATGTAGCATCCGTACTTGGAACAAAAATCATGGTTGATTATAAAGGTGTGACCCTGAGTCATTTTGTACAGGCCACTCCAAGTGTTCTGAAGAAAATTGTTGCAGTGTGTCAGGAGTCTATGCCTCTGCGATTGAAAGGTAGTCATCACGTGAATATACCAACAGGCGTAGATAAAATCTTCTCACTAATATCGGTGTTCTTGAACGAGAAAGCTAAGAAAAGGTTGAGGATCTACAAAGGCTGTCAAGATTTGGTCAATGATCTGCCTAAAGATATAGTTCCAACAGAATATGGCGGTGACGGTGGTAGTATTGCGGAACTCATAGAGAACAATATATCAAAATTTAACGAGTTTCGAGAGTGGATGAAGCAAGAGGAAACTTTCGGCACAGACGAGTCGAAACGACTTGGTAAAGCCGTCAAAACCAAAGCCCAGAAATCGTTGGATGGCTCCTTTAGAAAACTTGATATAGACTGA

Protein

MIRELPEELAKIAKDELNENPERVSEDLMYVKDWIEQQPHLRARKDDQWLVAILRGCKYNFEKVKKKLDLYYTLRTTAPDVTLRHRPLGPDFLNFFRLGTCLLLPKPKDQIYPRVILIRAGVYNPETNNVIDIMCILYYVVQIAIIEDDVASVLGTKIMVDYKGVTLSHFVQATPSVLKKIVAVCQESMPLRLKGSHHVNIPTGVDKIFSLISVFLNEKAKKRLRIYKGCQDLVNDLPKDIVPTEYGGDGGSIAELIENNISKFNEFREWMKQEETFGTDESKRLGKAVKTKAQKSLDGSFRKLDID

Uniprot

H9J8W3   A0A2A4IT19   A0A2W1BN19   A0A2H1WW22   A0A194PKQ7   A0A2H4RMP2   + More
A0A194R7A0   A0A0L7LC65   A0A212F0Q8   A0A1E1W1H6   A0A2H1WW13   A0A194PKE4   A0A2A4JH87   A0A194R1T7   A0A194PRZ7   A0A1B0CUX6   A0A2A4ISF2   A0A2H4RMN9   A0A2H4RMP4   A0A1I8N7T4   A0A212F6T3   A0A194R225   A0A0M4ELC6   A0A336K545   A0A1L8DZG8   A0A1L8DZ17   A0A1I8Q7S8   A0A1B0GLZ3   A0A2W1BIJ4   A0A1Q3G2T7   A0A1B0EVG2   A0A1I8Q731   A0A0L7KQJ3   A0A1B0CVS3   Q16ZA0   T1E7Q0   W5JVC8   A0A2H1WW03   A0A1L8DZH1   B4PD52   Q16Z99   A0A1W7R8C4   A0A194PME6   A0A084WB39   A0A1B0CUX7   A0A3B0K9H1   A0A182U0Q4   A0A1J1HK45   Q2MGL8   B4LG89   A8E768   A0A2J7Q750   A0A1I8Q7W2   A0A182J0U4   Q5TMY7   B5DR79   B4H5J4   B3NJG4   A0A1I8MTB0   A0A0J9RMX9   A0A182UMQ1   A0A182KT08   A0A182QP18   A0A182VM76   A0A1I8N7K9   A0A182UHL4   A0A1I8MSK5   A0A182KT05   A0A194PLP1   A0A0T6ATJ8   B4MXY4   B4PHU7   A0A182KD53   A0A1L8DZ58   B3NC29   A0A1I8P9L0   A0A1I8N593   A0A182MLC5   A0A1L8EG22   A0A182FW74   A0A182QZB3   B4J2F9   A0A194R3C9   A0A1L8DZ72   A0A2H4RMV4   W5JX38   A0A1I8QC25   A0A1I8PNA3   A0A182LZL5   A0A1L8EFQ9   B4HU54   A0A0L0BQX6   B4QQK7   A0A0A1WU57   A0A1B0DFH3   Q6NLM7   A0A212F6S7   A0A1I8NMW3   A0A1W4W5W2   A0A2W1BP80  

Pubmed

19121390    28756777    26354079    29136137    26227816    22118469    + More
25315136    17510324    20920257    23761445    17994087    17550304    24438588    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12364791    15632085    22936249    20966253    26108605    25830018    26109357    26109356   

EMBL

BABH01004967    NWSH01007555    PCG62915.1    KZ150033    PZC74677.1    ODYU01011491    + More
SOQ57248.1    KQ459601    KPI93912.1    MG434600    ATY51906.1    KQ460870    KPJ11746.1    JTDY01001753    KOB72985.1    AGBW02011047    OWR47335.1    GDQN01010231    GDQN01007468    GDQN01002291    GDQN01001042    JAT80823.1    JAT83586.1    JAT88763.1    JAT90012.1    SOQ57250.1    KPI93911.1    NWSH01001584    PCG70793.1    KPJ11748.1    KPI93910.1    AJWK01029765    PCG62917.1    MG434597    ATY51903.1    MG434598    ATY51904.1    AGBW02009977    OWR49434.1    KPJ11747.1    CP012525    ALC44235.1    UFQS01000124    UFQT01000124    SSX00096.1    SSX20476.1    GFDF01002409    JAV11675.1    GFDF01002408    JAV11676.1    AJVK01009188    PZC74678.1    GFDL01000931    JAV34114.1    AJVK01009186    AJVK01009187    JTDY01007407    KOB65224.1    AJWK01031086    CH477495    EAT39960.1    GAMD01002852    JAA98738.1    ADMH02000337    ETN66915.1    SOQ57249.1    GFDF01002402    JAV11682.1    CM000159    EDW92800.1    EAT39961.1    GEHC01000255    JAV47390.1    KPI93909.1    ATLV01022312    KE525331    KFB47433.1    OUUW01000009    SPP84770.1    CVRI01000002    CRK86617.1    AE014296    ABC66124.1    CH940647    EDW69397.1    BT031010    ABV82392.1    NEVH01017447    PNF24412.1    AAAB01008986    EAA43295.4    CH379070    EDY73939.1    CH479211    EDW33046.1    CH954178    EDV50126.2    CM002912    KMY96769.1    AXCN02001683    KPI93913.1    LJIG01022828    KRT78512.1    CH963876    EDW76973.1    EDW93406.1    GFDF01002368    JAV11716.1    EDV50917.1    AXCM01009708    AXCM01009709    GFDG01001250    JAV17549.1    CH916366    EDV96018.1    KPJ11745.1    GFDF01002367    JAV11717.1    MG434653    ATY51959.1    ADMH02000039    ETN68020.1    GFDG01001249    JAV17550.1    CH480817    EDW50475.1    JRES01001589    KNC21644.1    CM000363    EDX09213.1    KMY97587.1    GBXI01012237    JAD02055.1    AJVK01005789    BT012303    AAS77428.1    AAX52731.1    OWR49433.1    PZC74676.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007151    + More
UP000092461    UP000095301    UP000092553    UP000095300    UP000092462    UP000008820    UP000000673    UP000002282    UP000030765    UP000268350    UP000075902    UP000183832    UP000000803    UP000008792    UP000235965    UP000075880    UP000007062    UP000001819    UP000008744    UP000008711    UP000075903    UP000075882    UP000075886    UP000007798    UP000075881    UP000075883    UP000069272    UP000001070    UP000001292    UP000037069    UP000000304    UP000192221   

PRIDE

H9J8W3    Q2MGL8    Q6NLM7   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036273   CRAL/TRIO_N_dom_sf        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9J8W3   A0A2A4IT19   A0A2W1BN19   A0A2H1WW22   A0A194PKQ7   A0A2H4RMP2   + More
A0A194R7A0   A0A0L7LC65   A0A212F0Q8   A0A1E1W1H6   A0A2H1WW13   A0A194PKE4   A0A2A4JH87   A0A194R1T7   A0A194PRZ7   A0A1B0CUX6   A0A2A4ISF2   A0A2H4RMN9   A0A2H4RMP4   A0A1I8N7T4   A0A212F6T3   A0A194R225   A0A0M4ELC6   A0A336K545   A0A1L8DZG8   A0A1L8DZ17   A0A1I8Q7S8   A0A1B0GLZ3   A0A2W1BIJ4   A0A1Q3G2T7   A0A1B0EVG2   A0A1I8Q731   A0A0L7KQJ3   A0A1B0CVS3   Q16ZA0   T1E7Q0   W5JVC8   A0A2H1WW03   A0A1L8DZH1   B4PD52   Q16Z99   A0A1W7R8C4   A0A194PME6   A0A084WB39   A0A1B0CUX7   A0A3B0K9H1   A0A182U0Q4   A0A1J1HK45   Q2MGL8   B4LG89   A8E768   A0A2J7Q750   A0A1I8Q7W2   A0A182J0U4   Q5TMY7   B5DR79   B4H5J4   B3NJG4   A0A1I8MTB0   A0A0J9RMX9   A0A182UMQ1   A0A182KT08   A0A182QP18   A0A182VM76   A0A1I8N7K9   A0A182UHL4   A0A1I8MSK5   A0A182KT05   A0A194PLP1   A0A0T6ATJ8   B4MXY4   B4PHU7   A0A182KD53   A0A1L8DZ58   B3NC29   A0A1I8P9L0   A0A1I8N593   A0A182MLC5   A0A1L8EG22   A0A182FW74   A0A182QZB3   B4J2F9   A0A194R3C9   A0A1L8DZ72   A0A2H4RMV4   W5JX38   A0A1I8QC25   A0A1I8PNA3   A0A182LZL5   A0A1L8EFQ9   B4HU54   A0A0L0BQX6   B4QQK7   A0A0A1WU57   A0A1B0DFH3   Q6NLM7   A0A212F6S7   A0A1I8NMW3   A0A1W4W5W2   A0A2W1BP80  

PDB

1R5L     E-value=6.27903e-19,     Score=230

KEGG

101736055    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0008270   GO:0043565   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634  

Length:

307

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13555

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00816

outside

1  -  307

 

 

Pi

228.017066

Theta

162.145945

Tajima's D

1.657075

CLR

0.268451

CSRT

0.821508924553772

Interpretation

Uncertain