Gene

KWMTBOMO01871

Pre Gene Modal

BGIBMGA005956

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Papilio_xuthus]

Location

Bomo_Chr4(-):7144218-7154818      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.11

CDS

ATGAAGGGTAGATCGATATCTGAGGGCTTGAAGCGAGTTGCGGCGGAAGAACTGAACGAAGATCCCAAGAAAATTCCTTTTTATATAAAGGCCATAAGAGATTGGTTGCAAGAGCAGCCTCATTTGCGTTCGATTAAAGCTTCGGATCAGTGGCTGATCGGATTCCTACGCGGGAGCAAATATAATTTAGATAAATGTAAAAAGAAACTGGATAAGTATTATACTTTGAAATCGGCCGCTCCAGAGTTCTTCAAAAATCGAGACCCATTAGATCCGTCAATGCAAGCGATGCTAAAGGCGGGAATATTCTTACCTCTAAGGAATTGCGTCACAGAAGACGGCCCTCGGCCTTGTTTAGTCAGAATGTCGGAACAGTATAAATCTAAAAGACCTTTATCTGATCTCATAAAGATCAGTTTTATGTTTGCTGAATTAATGCTCTTGGAAGATGACAACTTTAACATCGCGGGGCAGATAGTTCTGGTGGATCTAAGCGATACTGGTTTAACTTTATTGACACAGTTCAGTCCTAGTGTTGCGAGGAAGACATTTTTGTACGCGGAAAGGGCTCTGACAGTTCGCATGAAAAGCATTTATGTGTTGAACATGTCACGTGGCTTAAAGGCTACCCTGAACGTTGTCAAGATGTTGCTGGGACAGAAAATAAGAAATAGGCTACAAATATACGATGAGAATTACGGAAAATTATACAATTACGTACCAGAATCAATATTGCCAGCCGAGTATGGAGGTGATATGGGTGACGTTCAAGAACTAACAGATTACTGGAAAACGAAAATGGAAAGCTATAGAAGCTGGTTTTTACTGCAAGATGAAAATTTTGAAAGGGTTACGGCAAACATCAATACTCGCAGTCCTTCACCGACTGCGACAGAAAACAACGAAGAAAATCGAACATTTCGACGATTAGAGTTAGATTAA

Protein

MKGRSISEGLKRVAAEELNEDPKKIPFYIKAIRDWLQEQPHLRSIKASDQWLIGFLRGSKYNLDKCKKKLDKYYTLKSAAPEFFKNRDPLDPSMQAMLKAGIFLPLRNCVTEDGPRPCLVRMSEQYKSKRPLSDLIKISFMFAELMLLEDDNFNIAGQIVLVDLSDTGLTLLTQFSPSVARKTFLYAERALTVRMKSIYVLNMSRGLKATLNVVKMLLGQKIRNRLQIYDENYGKLYNYVPESILPAEYGGDMGDVQELTDYWKTKMESYRSWFLLQDENFERVTANINTRSPSPTATENNEENRTFRRLELD

Uniprot

H9J8W4   A0A2A4JCS0   A0A2W1BP80   A0A194PLP1   A0A194R3C9   A0A0S2Z370   + More
A0A212FL29   H9J8W6   A0A212FL17   A0A0L7LDL8   H9J8W5   A0A0T6ATJ8   A0A2H1WWA1   A0A182UMQ1   A0A182KT08   A0A182KD53   A0A2H1WW13   A0A182U0Q4   Q16ZA0   A0A182LZL5   A0A182HPS1   A0A182X007   A0A182QP18   A0A084WB40   A0A182FW74   A0A1B0CUX6   W5JX38   A0A0K8TNI0   Q5TMY7   A0A1W7R8C4   A0A182YQ85   A0A182WD92   W5JVC8   A0A182IQP8   A0A1L8DZ63   A0A2M4CYG7   A0A182MXC3   Q16Z99   A0A182RXC9   A0A336K545   A0A084WB39   A0A182PGB9   T1E7Q0   A0A1B0GLZ3   B0X6S7   A0A194R1T7   A0A182MLC5   A0A182J0U4   A0A1B0CVS3   A0A1Y1K0N7   A0A182IMC1   A0A2H4RMP4   A0A1I8PIW8   A0A1I8MTB0   A0A194R225   A0A194PRZ7   A0A182UHL4   A0A1Q3G2T7   A0A1L8DZG8   A0A182VM76   A0A182KT05   A0A1Y1JU40   A0A182QZB3   A0A0A1WU57   A0A1B0C811   A0A212F6T3   A0A1B0DFH3   A0A084VZS0   A0A212F0Q8   A0A1J1HK45   A0A2H4RMQ2   A0A0T6ATN3   A0A2J7Q750   A0A1J1HGT4   A0A1L8DZ17   A0A2A4JH87   A0A182GJ38   A0A1L8DZ58   A0A1L8DZ72   B0X6S5   A0A1B0CUX7   A0A1J1HFJ3   A0A1S4FJA2   Q16ZA3   A0A182QUH0   A0A3F2YSV5   A0A194PME6   Q7Q2Q5   A0A1B0EVG2   A0A2H4RMN9   A0A1J1HGE9   T1DST5   A0A1Y1KR22   A0A2H1WW03   A0A1Y1KLA3   U5EFW3   A0A1E1W1H6   A0A2H4RMP0   A0A034WEU6   A0A1Y1LIV9  

Pubmed

19121390    28756777    26354079    25684408    22118469    26227816    + More
20966253    17510324    24438588    20920257    23761445    26369729    12364791    25244985    28004739    29136137    25315136    25830018    26483478    14747013    17210077    25348373   

EMBL

BABH01004964    BABH01004965    NWSH01002089    PCG69222.1    KZ150033    PZC74676.1    + More
KQ459601    KPI93913.1    KQ460870    KPJ11745.1    KT943553    ALQ33311.1    AGBW02007898    OWR54442.1    BABH01004960    BABH01004961    OWR54443.1    JTDY01001571    KOB73495.1    BABH01004962    BABH01004963    LJIG01022828    KRT78512.1    ODYU01011491    SOQ57246.1    SOQ57250.1    CH477495    EAT39960.1    AXCM01009708    APCN01003270    AXCN02001683    ATLV01022312    KE525331    KFB47434.1    AJWK01029765    ADMH02000039    ETN68020.1    GDAI01001910    JAI15693.1    AAAB01008986    EAA43295.4    GEHC01000255    JAV47390.1    ADMH02000337    ETN66915.1    GFDF01002350    JAV11734.1    GGFL01006202    MBW70380.1    EAT39961.1    UFQS01000124    UFQT01000124    SSX00096.1    SSX20476.1    KFB47433.1    GAMD01002852    JAA98738.1    AJVK01009188    DS232422    EDS41598.1    KPJ11748.1    AXCM01009709    AJWK01031086    GEZM01098890    JAV53680.1    AXCP01008672    MG434598    ATY51904.1    KPJ11747.1    KPI93910.1    GFDL01000931    JAV34114.1    GFDF01002409    JAV11675.1    GEZM01100639    JAV52829.1    GBXI01012237    JAD02055.1    AJWK01000036    AGBW02009977    OWR49434.1    AJVK01005789    ATLV01018955    KE525256    KFB43464.1    AGBW02011047    OWR47335.1    CVRI01000002    CRK86617.1    MG434613    ATY51919.1    KRT78511.1    NEVH01017447    PNF24412.1    CRK86620.1    GFDF01002408    JAV11676.1    NWSH01001584    PCG70793.1    JXUM01244789    KQ636530    KXJ62416.1    GFDF01002368    JAV11716.1    GFDF01002367    JAV11717.1    EDS41596.1    CRK86619.1    EAT39957.1    AXCN02001905    APCN01005308    KPI93909.1    AAAB01008968    EAA13214.4    AJVK01009186    AJVK01009187    MG434597    ATY51903.1    CRK86618.1    GAMD01000080    JAB01511.1    GEZM01078068    GEZM01078066    JAV63028.1    SOQ57249.1    GEZM01080375    JAV62183.1    GANO01003710    JAB56161.1    GDQN01010231    GDQN01007468    GDQN01002291    GDQN01001042    JAT80823.1    JAT83586.1    JAT88763.1    JAT90012.1    MG434599    ATY51905.1    GAKP01006292    JAC52660.1    GEZM01057510    JAV72290.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000075903    UP000075882    UP000075881    UP000075902    UP000008820    UP000075883    UP000075840    UP000076407    UP000075886    UP000030765    UP000069272    UP000092461    UP000000673    UP000007062    UP000076408    UP000075920    UP000075880    UP000075884    UP000075900    UP000075885    UP000092462    UP000002320    UP000095300    UP000095301    UP000183832    UP000235965    UP000069940    UP000249989   

PRIDE

H9J8W4    H9J8W6    H9J8W5   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9J8W4   A0A2A4JCS0   A0A2W1BP80   A0A194PLP1   A0A194R3C9   A0A0S2Z370   + More
A0A212FL29   H9J8W6   A0A212FL17   A0A0L7LDL8   H9J8W5   A0A0T6ATJ8   A0A2H1WWA1   A0A182UMQ1   A0A182KT08   A0A182KD53   A0A2H1WW13   A0A182U0Q4   Q16ZA0   A0A182LZL5   A0A182HPS1   A0A182X007   A0A182QP18   A0A084WB40   A0A182FW74   A0A1B0CUX6   W5JX38   A0A0K8TNI0   Q5TMY7   A0A1W7R8C4   A0A182YQ85   A0A182WD92   W5JVC8   A0A182IQP8   A0A1L8DZ63   A0A2M4CYG7   A0A182MXC3   Q16Z99   A0A182RXC9   A0A336K545   A0A084WB39   A0A182PGB9   T1E7Q0   A0A1B0GLZ3   B0X6S7   A0A194R1T7   A0A182MLC5   A0A182J0U4   A0A1B0CVS3   A0A1Y1K0N7   A0A182IMC1   A0A2H4RMP4   A0A1I8PIW8   A0A1I8MTB0   A0A194R225   A0A194PRZ7   A0A182UHL4   A0A1Q3G2T7   A0A1L8DZG8   A0A182VM76   A0A182KT05   A0A1Y1JU40   A0A182QZB3   A0A0A1WU57   A0A1B0C811   A0A212F6T3   A0A1B0DFH3   A0A084VZS0   A0A212F0Q8   A0A1J1HK45   A0A2H4RMQ2   A0A0T6ATN3   A0A2J7Q750   A0A1J1HGT4   A0A1L8DZ17   A0A2A4JH87   A0A182GJ38   A0A1L8DZ58   A0A1L8DZ72   B0X6S5   A0A1B0CUX7   A0A1J1HFJ3   A0A1S4FJA2   Q16ZA3   A0A182QUH0   A0A3F2YSV5   A0A194PME6   Q7Q2Q5   A0A1B0EVG2   A0A2H4RMN9   A0A1J1HGE9   T1DST5   A0A1Y1KR22   A0A2H1WW03   A0A1Y1KLA3   U5EFW3   A0A1E1W1H6   A0A2H4RMP0   A0A034WEU6   A0A1Y1LIV9  

PDB

1R5L     E-value=5.44448e-09,     Score=144

KEGG

101735929    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01416

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01532

outside

1  -  313

 

 

Pi

263.196057

Theta

43.885886

Tajima's D

1.07177

CLR

108.96633

CSRT

0.675866206689666

Interpretation

Uncertain