SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01868
Pre Gene Modal
BGIBMGA005958
Annotation
PREDICTED:_alpha-tocopherol_transfer_protein-like_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.653
 

Sequence

CDS
ATGGAGATACGTCCTTTGTCAGATGCTCTTCGTAAGAGAGCGAGAGAAGAGATTAATGAGAATCCAGAAACACTAGTTTCGAATTTCAATGAACTGAGAGAGTGGCTAAACGAACACCCCCAACTAAAATCAGAAATAATCTCTGACCAATGGTTGGTCGCTTTCCTTCGCGGTAGTAAGCATAATTTGGAAAAATGCAAATCAAAAATAGAACGGTACTACAATTTGAGCACTGCTGCACCAGAACTTTATGCAAACAGAGATCCTTTGGATCCGCAAATACAGGAATTGTTAAAATTAGGTTTGTTTCTGCCGCTGAAGAAATGCGCAAGTGAAGATTCACCTCGAATAGTGTTAGTGCGAATGGGTGAGCTAAATAAAGTGCACGGAAGGTTGTCTGATCTTTGTAAAATCGGATTTATGATAGCTGAGATACTGTTACTCGAAGATGATAATTTTACTATAAGTGGCGAGGAACTTGTCTCCGACCTAAAGGATACGGGCTTCGGTTTGATAAGACAATGGACACCCGCATACGCCAGAAAGCTATTTATGTGTTTTGAAAATGCGCTAACTATCCGTATGACCAGAATTAACGTGCTAAACGCTCCTATTGGAATGAGAACAGCAGTCGCAATTTTCAAATTATTTTTAAAGGAAAAATTGAAGAAAAGGATATACATATACAACGAGGACTATGAAGAGATGTTTAAATACATACCGAAATCATTGCTGCCTAAAGAATACGGAGGCACTGAAGGTACCTTACAAGATTTGACAGATCATTGGAAGAACAAAGTGGAAAGTTACCGGTCTTGGAAATGTGCCCGTGAAGACTCTCCTCGCCCCGCTATCATCAGAGCAGGCCCACTTTACAAACATCAGCATGCAGTCGCTGATTTAATCAAGATAAGTTTCATGATCGAGGAAATACTGCTTTTGGAAGACGACAACTTCACCGTTGCGGGCAAAGTGAGGCCTCACCGTCACTACTTATAA
Protein
MEIRPLSDALRKRAREEINENPETLVSNFNELREWLNEHPQLKSEIISDQWLVAFLRGSKHNLEKCKSKIERYYNLSTAAPELYANRDPLDPQIQELLKLGLFLPLKKCASEDSPRIVLVRMGELNKVHGRLSDLCKIGFMIAEILLLEDDNFTISGEELVSDLKDTGFGLIRQWTPAYARKLFMCFENALTIRMTRINVLNAPIGMRTAVAIFKLFLKEKLKKRIYIYNEDYEEMFKYIPKSLLPKEYGGTEGTLQDLTDHWKNKVESYRSWKCAREDSPRPAIIRAGPLYKHQHAVADLIKISFMIEEILLLEDDNFTVAGKVRPHRHYL

Summary

EMBL
BABH01004960    BABH01004961    KQ459601    KPI93913.1    KQ460870    KPJ11745.1    + More
KZ150033    PZC74676.1    KT943553    ALQ33311.1    NWSH01002089    PCG69222.1    AGBW02007898    OWR54443.1    OWR54442.1    LJIG01022828    KRT78512.1    BABH01004964    BABH01004965    AXCN02001683    GEHC01000255    JAV47390.1    CH477495    EAT39960.1    ODYU01011491    SOQ57250.1    AGBW02009977    OWR49434.1    KPJ11748.1    EAT39961.1    NWSH01001584    PCG70793.1    MG434598    ATY51904.1    CVRI01000002    CRK86620.1    AXCM01009708    AXCM01009709    AAAB01008986    EAA43295.4    ATLV01022312    KE525331    KFB47433.1    GDAI01001910    JAI15693.1    KPI93909.1    GAMD01002852    JAA98738.1    APCN01003270    CRK86617.1    ADMH02000337    ETN66915.1    MG434597    ATY51903.1    ADMH02000039    ETN68020.1    GEZM01012311    GEZM01012309    JAV92997.1    GEZM01012310    JAV92996.1    KPI93911.1    GFDL01000931    JAV34114.1    GDQN01010231    GDQN01007468    GDQN01002291    GDQN01001042    JAT80823.1    JAT83586.1    JAT88763.1    JAT90012.1    KPI93910.1    JTDY01001571    KOB73495.1    KPJ11746.1    KRT78511.1    AJWK01000036    GFDF01002350    JAV11734.1    GEZM01100639    JAV52829.1    AGBW02011047    OWR47335.1    KFB47434.1    CRK86619.1    GGFL01006202    MBW70380.1    AJVK01009188    NWSH01007555    PCG62917.1    KPJ11747.1    AJVK01005789    AJWK01029765    NEVH01017447    PNF24412.1    MG434653    ATY51959.1    ATLV01018955    KE525256    KFB43464.1    GEZM01080375    JAV62183.1    UFQS01000124    UFQT01000124    SSX00096.1    SSX20476.1    GFDF01002408    JAV11676.1    GFDF01002368    JAV11716.1    GFDF01002367    JAV11717.1    GDQN01000407    JAT90647.1    AXCP01008672    DS232422    EDS41596.1    AJVK01009186    AJVK01009187    CRK86618.1    AJWK01031086    CRK86627.1    SOQ57249.1    EAT39957.1    GFDF01002409    JAV11675.1    AXCN02001905    JXUM01244789    KQ636530    KXJ62416.1    CRK86626.1    PZC74678.1    GFDG01001038    JAV17761.1   
Pfam
PF00650   CRAL_TRIO
Interpro
IPR001251   CRAL-TRIO_dom        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR011074   CRAL/TRIO_N_dom       
SUPFAM
SSF52087   SSF52087        + More
SSF46938   SSF46938       
Gene 3D
PDB
3W68     E-value=2.3287e-10,     Score=156

Ontologies

GO

Topology

Length:
332
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.72997
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00882
outside
1  -  332
 
 

Population Genetic Test Statistics

Pi
315.666091
Theta
193.33285
Tajima's D
1.483485
CLR
0
CSRT
0.782760861956902
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号