Gene

KWMTBOMO01868

Pre Gene Modal

BGIBMGA005958

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):7117976-7127948      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.653

CDS

ATGGAGATACGTCCTTTGTCAGATGCTCTTCGTAAGAGAGCGAGAGAAGAGATTAATGAGAATCCAGAAACACTAGTTTCGAATTTCAATGAACTGAGAGAGTGGCTAAACGAACACCCCCAACTAAAATCAGAAATAATCTCTGACCAATGGTTGGTCGCTTTCCTTCGCGGTAGTAAGCATAATTTGGAAAAATGCAAATCAAAAATAGAACGGTACTACAATTTGAGCACTGCTGCACCAGAACTTTATGCAAACAGAGATCCTTTGGATCCGCAAATACAGGAATTGTTAAAATTAGGTTTGTTTCTGCCGCTGAAGAAATGCGCAAGTGAAGATTCACCTCGAATAGTGTTAGTGCGAATGGGTGAGCTAAATAAAGTGCACGGAAGGTTGTCTGATCTTTGTAAAATCGGATTTATGATAGCTGAGATACTGTTACTCGAAGATGATAATTTTACTATAAGTGGCGAGGAACTTGTCTCCGACCTAAAGGATACGGGCTTCGGTTTGATAAGACAATGGACACCCGCATACGCCAGAAAGCTATTTATGTGTTTTGAAAATGCGCTAACTATCCGTATGACCAGAATTAACGTGCTAAACGCTCCTATTGGAATGAGAACAGCAGTCGCAATTTTCAAATTATTTTTAAAGGAAAAATTGAAGAAAAGGATATACATATACAACGAGGACTATGAAGAGATGTTTAAATACATACCGAAATCATTGCTGCCTAAAGAATACGGAGGCACTGAAGGTACCTTACAAGATTTGACAGATCATTGGAAGAACAAAGTGGAAAGTTACCGGTCTTGGAAATGTGCCCGTGAAGACTCTCCTCGCCCCGCTATCATCAGAGCAGGCCCACTTTACAAACATCAGCATGCAGTCGCTGATTTAATCAAGATAAGTTTCATGATCGAGGAAATACTGCTTTTGGAAGACGACAACTTCACCGTTGCGGGCAAAGTGAGGCCTCACCGTCACTACTTATAA

Protein

MEIRPLSDALRKRAREEINENPETLVSNFNELREWLNEHPQLKSEIISDQWLVAFLRGSKHNLEKCKSKIERYYNLSTAAPELYANRDPLDPQIQELLKLGLFLPLKKCASEDSPRIVLVRMGELNKVHGRLSDLCKIGFMIAEILLLEDDNFTISGEELVSDLKDTGFGLIRQWTPAYARKLFMCFENALTIRMTRINVLNAPIGMRTAVAIFKLFLKEKLKKRIYIYNEDYEEMFKYIPKSLLPKEYGGTEGTLQDLTDHWKNKVESYRSWKCAREDSPRPAIIRAGPLYKHQHAVADLIKISFMIEEILLLEDDNFTVAGKVRPHRHYL

Uniprot

H9J8W6   A0A194PLP1   A0A194R3C9   A0A2W1BP80   A0A0S2Z370   A0A2A4JCS0   + More
A0A212FL17   A0A212FL29   A0A0T6ATJ8   H9J8W4   A0A182QZB3   A0A1W7R8C4   Q16ZA0   A0A182UHL4   A0A2H1WW13   A0A212F6T3   A0A182KT05   A0A194R1T7   A0A182VM76   Q16Z99   A0A2A4JH87   A0A2H4RMP4   A0A1J1HGT4   A0A182MLC5   Q5TMY7   A0A084WB39   A0A0K8TNI0   A0A182WD92   A0A194PME6   A0A182X007   T1E7Q0   A0A182HPS1   A0A182RXC9   A0A182KD53   A0A182LZL5   A0A1J1HK45   W5JVC8   A0A182PGB9   A0A182J0U4   A0A182QP18   A0A2H4RMN9   A0A182MXC3   W5JX38   A0A1Y1NBL4   A0A1Y1N9U4   A0A194PKE4   A0A1Q3G2T7   A0A1E1W1H6   A0A194PRZ7   A0A0L7LDL8   A0A182U0Q4   A0A182UMQ1   A0A182KT08   A0A182FW74   A0A194R7A0   A0A0T6ATN3   A0A1B0C811   A0A1L8DZ63   A0A1I8PIW8   A0A1Y1JU40   A0A212F0Q8   A0A084WB40   A0A1J1HFJ3   A0A2M4CYG7   A0A1B0GLZ3   A0A182IQP8   A0A2A4ISF2   A0A194R225   A0A1B0DFH3   A0A1B0CUX6   A0A1I8NML3   A0A2J7Q750   A0A2H4RMV4   A0A084VZS0   A0A1Y1KLA3   A0A336K545   A0A1L8DZ17   A0A1L8DZ58   A0A182YQ85   A0A1L8DZ72   A0A1I8MTB0   A0A1E1WUN0   A0A182IMC1   B0X6S5   A0A1B0EVG2   A0A1J1HGE9   A0A1B0CVS3   A0A1B0CUX7   A0A1J1HFK1   A0A2H1WW03   Q16ZA3   A0A1L8DZG8   A0A182QUH0   A0A182GJ38   A0A1J1HGF5   A0A1I8M1T5   A0A2W1BIJ4   A0A1L8EGD3  

Pubmed

19121390    26354079    28756777    25684408    22118469    17510324    + More
20966253    29136137    12364791    24438588    26369729    20920257    23761445    28004739    26227816    25244985    25315136    26483478   

EMBL

BABH01004960    BABH01004961    KQ459601    KPI93913.1    KQ460870    KPJ11745.1    + More
KZ150033    PZC74676.1    KT943553    ALQ33311.1    NWSH01002089    PCG69222.1    AGBW02007898    OWR54443.1    OWR54442.1    LJIG01022828    KRT78512.1    BABH01004964    BABH01004965    AXCN02001683    GEHC01000255    JAV47390.1    CH477495    EAT39960.1    ODYU01011491    SOQ57250.1    AGBW02009977    OWR49434.1    KPJ11748.1    EAT39961.1    NWSH01001584    PCG70793.1    MG434598    ATY51904.1    CVRI01000002    CRK86620.1    AXCM01009708    AXCM01009709    AAAB01008986    EAA43295.4    ATLV01022312    KE525331    KFB47433.1    GDAI01001910    JAI15693.1    KPI93909.1    GAMD01002852    JAA98738.1    APCN01003270    CRK86617.1    ADMH02000337    ETN66915.1    MG434597    ATY51903.1    ADMH02000039    ETN68020.1    GEZM01012311    GEZM01012309    JAV92997.1    GEZM01012310    JAV92996.1    KPI93911.1    GFDL01000931    JAV34114.1    GDQN01010231    GDQN01007468    GDQN01002291    GDQN01001042    JAT80823.1    JAT83586.1    JAT88763.1    JAT90012.1    KPI93910.1    JTDY01001571    KOB73495.1    KPJ11746.1    KRT78511.1    AJWK01000036    GFDF01002350    JAV11734.1    GEZM01100639    JAV52829.1    AGBW02011047    OWR47335.1    KFB47434.1    CRK86619.1    GGFL01006202    MBW70380.1    AJVK01009188    NWSH01007555    PCG62917.1    KPJ11747.1    AJVK01005789    AJWK01029765    NEVH01017447    PNF24412.1    MG434653    ATY51959.1    ATLV01018955    KE525256    KFB43464.1    GEZM01080375    JAV62183.1    UFQS01000124    UFQT01000124    SSX00096.1    SSX20476.1    GFDF01002408    JAV11676.1    GFDF01002368    JAV11716.1    GFDF01002367    JAV11717.1    GDQN01000407    JAT90647.1    AXCP01008672    DS232422    EDS41596.1    AJVK01009186    AJVK01009187    CRK86618.1    AJWK01031086    CRK86627.1    SOQ57249.1    EAT39957.1    GFDF01002409    JAV11675.1    AXCN02001905    JXUM01244789    KQ636530    KXJ62416.1    CRK86626.1    PZC74678.1    GFDG01001038    JAV17761.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000075886    + More
UP000008820    UP000075902    UP000075882    UP000075903    UP000183832    UP000075883    UP000007062    UP000030765    UP000075920    UP000076407    UP000075840    UP000075900    UP000075881    UP000000673    UP000075885    UP000075880    UP000075884    UP000037510    UP000069272    UP000092461    UP000095300    UP000092462    UP000235965    UP000076408    UP000095301    UP000002320    UP000069940    UP000249989   

PRIDE

H9J8W6    H9J8W4   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9J8W6   A0A194PLP1   A0A194R3C9   A0A2W1BP80   A0A0S2Z370   A0A2A4JCS0   + More
A0A212FL17   A0A212FL29   A0A0T6ATJ8   H9J8W4   A0A182QZB3   A0A1W7R8C4   Q16ZA0   A0A182UHL4   A0A2H1WW13   A0A212F6T3   A0A182KT05   A0A194R1T7   A0A182VM76   Q16Z99   A0A2A4JH87   A0A2H4RMP4   A0A1J1HGT4   A0A182MLC5   Q5TMY7   A0A084WB39   A0A0K8TNI0   A0A182WD92   A0A194PME6   A0A182X007   T1E7Q0   A0A182HPS1   A0A182RXC9   A0A182KD53   A0A182LZL5   A0A1J1HK45   W5JVC8   A0A182PGB9   A0A182J0U4   A0A182QP18   A0A2H4RMN9   A0A182MXC3   W5JX38   A0A1Y1NBL4   A0A1Y1N9U4   A0A194PKE4   A0A1Q3G2T7   A0A1E1W1H6   A0A194PRZ7   A0A0L7LDL8   A0A182U0Q4   A0A182UMQ1   A0A182KT08   A0A182FW74   A0A194R7A0   A0A0T6ATN3   A0A1B0C811   A0A1L8DZ63   A0A1I8PIW8   A0A1Y1JU40   A0A212F0Q8   A0A084WB40   A0A1J1HFJ3   A0A2M4CYG7   A0A1B0GLZ3   A0A182IQP8   A0A2A4ISF2   A0A194R225   A0A1B0DFH3   A0A1B0CUX6   A0A1I8NML3   A0A2J7Q750   A0A2H4RMV4   A0A084VZS0   A0A1Y1KLA3   A0A336K545   A0A1L8DZ17   A0A1L8DZ58   A0A182YQ85   A0A1L8DZ72   A0A1I8MTB0   A0A1E1WUN0   A0A182IMC1   B0X6S5   A0A1B0EVG2   A0A1J1HGE9   A0A1B0CVS3   A0A1B0CUX7   A0A1J1HFK1   A0A2H1WW03   Q16ZA3   A0A1L8DZG8   A0A182QUH0   A0A182GJ38   A0A1J1HGF5   A0A1I8M1T5   A0A2W1BIJ4   A0A1L8EGD3  

PDB

3W68     E-value=2.3287e-10,     Score=156

KEGG

101735657    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

Length:

332

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.72997

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00882

outside

1  -  332

 

 

Pi

315.666091

Theta

193.33285

Tajima's D

1.483485

CLR

0

CSRT

0.782760861956902

Interpretation

Uncertain