Gene

KWMTBOMO01857

Pre Gene Modal

BGIBMGA006185

Annotation

fatty_acid_transport_protein_[Bombyx_mori]

Location

Bomo_Chr4(+):6542282-6575681      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.675 Nuclear   Reliability : 1.883

CDS

ATGAAACCCGGTGCTGTTGACATCGAAAAAAGCAAACAGAACAGTGATTCGGATGGAGTGTCTTGGGGAAAAATATTTTACGTGTTGCTGTCGCTAGCAGTTATCGTGATAGCCTGTGGCGTCGCCTGGGTGTTCCAGGACTGGCTCACCAGTCTTATCATCTTCGTTGTACTTTTGGTGGTATTCACCGTTGGCTATTTCTGGAAATGGCTGTACATCGCGGCCAGAACTGCTCCTAGAGATTTTTCGGCACTGTGGTGTTATGTTAAAATCCTGAGACTTTCGGGTAATTTTGGTAAGAAGAACTGGTCAATGCCCGATATATTCCATGAAAATGTAAAGAGACATCCGAACAAAGCATGCTTCCTTTACGAGAACGAGTCATGGTCCTTTAAACAGGTCGAAGAATTCAGTCTTCGTGTTACGGCAGTGCTTAAGAATCATGGTGTGAAACGTGGAGATGTTGTCGGCGTAATGATGAATAACTGTCCGGAATTGCCGGCGACGTGGCTAGGCGTAGCTCGCATGGGAGGCGTGTCGCCTCTCATAAACACGAACCAAACCGGAAACGCTCTTCTGCATTCGGTTAACGTTGCGAAATGTAACGTTGTGATATACGGAAGCGAGTTTCAGAGTGCATTCGATGAAATATCAAATGAAATAAATCCCGCAATAAAACTGTATAGATACAACCGGAGACCCCTAAATGCATCAGGTGATGCTGTTAGGGTTGTAGAATCGGAAAACGATTTCACTCATATGTTGGAGACTACACCTCCTGCCCCGTGGAGTCTTTCCGACGGAGAAGGCTTCACCGGAAAACTTCTATATATATACACGTCAGGGACTACTGGATTGCCCAAAGCAGCAGTTATATCTCCGTCAAGGATGGTGTTCATGGCATCGGGCGTACATTATTTAGGTGGATTGAGAAAAAACGATATAATGTACTGTCCAATGCCTTTGTATCATTCAGCTGGAGGGTGTATTTCAGTTGGTCAGGCCTTCATATTCGGGTGCACTGTAGCTTTGAGAGCGAAATTTTCGGCGTCTGCATATTTCCCGGATTGCATTAAATTCAAAGCAACGGCCGCTCACTACATTGGGGAGATGTGTCGGTATATCCTAGCAACACCTCCGTCCGCAACTGACAGGCAACACAAAGTTCGAACCGTATACGGCAATGGAATGAGGCCAACCATCTGGACAGAATTCGTCAAACGCTTCAACATCAAACGTGTCGTCGAGTTTTATGGCGCAACAGAAGGCAACGCAAATATCGTAAACATCGACAACAAGACAGGTGCAATAGGATTTGTATCGAGAATCATCCCCGCAGTTTACCCGATAGCGATTCTCAAGGTTGATCAAGAAACTGGCGAACCAATCAGGAATTCCAAAGGACTTTGCCAGCTAGCAAAGCCGTATGAGCCAGGAGTATTTATTGGCAAGATTAAACCTAACAATCCATCAAGGGCGTTCCTGGGTTACGTGGACAAAGAAGCATCTGAGAAGAAAATAGTTAGAGACGTATTTAACATCGGCGATTCTGCGTTTATATCAGGTGACATCCTGGTGGCGGACGAATTAGGTTATCTGTACTTCCGCGACCGCACCGGAGACACGTTCCGGTGGCGCGGAGAGAACGTTTCCACCACAGAGGTCGAGGCGGCCGTGTCTAGATGTGCCAATCAAAGGGACGCTGTAGTCTACGGTGTAGAGATTCCGAATACGGAAGGTCGGGCTGGCATGTGCGGCATAGTGGACATTGAAGGCACATTGGACCTGGATAAACTCGCCAAAGATATTGCGAAAGACCTGCCTAAATACGCGAGGCCAATATTCATTAGAATAATGACCAGCGTTGATATGACAGGAACATTCAAAATGAAGAAAGTGGATTTACAAAAAGAAGGTTATAATCCATCAACTGTGAGCGACAAAATGTTCTTCTTTGAACCAAAACAGAATAAGTACGTGCCCTTAGGAGTTGAAGAATACGAAAAGATTATATCTGGCGCTACGCAGCGCTGCGTTTCGAACTTGCTTTCCACAGGTCGTCGCTCTTCAGTTCGTCGCCTCTCGTTACGAAAGTTAGTCGCGACGATGATAGCCCTTGCCGTCGCCGCCGGTGTGTTCGCAGCCGCTTGGCTCAACATAGGTTTCTATTATTCTCTCACAGCTTCCGTGCTTCTGGTTGTTCTATATTTGATACTCGTTCAGAAAAAATTCTGCTACGTGGCGATAAAAACGATTCCACGGGATGTAAAGGCATTATACACATACATACAGATATTATGGATAACTCGAAAGTTCAGCAAGTTGAATCTCACTGTACCAGATATATTTCATGACACAGTGCAAAAGCATCCAGATAAAGCATGTTTCTTATTCAAGGATGAAGTATGGACATTTAAAGAGAACACCTCAGTTGGCCTGCCCCGGCGTGACACGAATCTGCCAAATGTCATGAGGAAAGCGTCTTTCTAA

Protein

MKPGAVDIEKSKQNSDSDGVSWGKIFYVLLSLAVIVIACGVAWVFQDWLTSLIIFVVLLVVFTVGYFWKWLYIAARTAPRDFSALWCYVKILRLSGNFGKKNWSMPDIFHENVKRHPNKACFLYENESWSFKQVEEFSLRVTAVLKNHGVKRGDVVGVMMNNCPELPATWLGVARMGGVSPLINTNQTGNALLHSVNVAKCNVVIYGSEFQSAFDEISNEINPAIKLYRYNRRPLNASGDAVRVVESENDFTHMLETTPPAPWSLSDGEGFTGKLLYIYTSGTTGLPKAAVISPSRMVFMASGVHYLGGLRKNDIMYCPMPLYHSAGGCISVGQAFIFGCTVALRAKFSASAYFPDCIKFKATAAHYIGEMCRYILATPPSATDRQHKVRTVYGNGMRPTIWTEFVKRFNIKRVVEFYGATEGNANIVNIDNKTGAIGFVSRIIPAVYPIAILKVDQETGEPIRNSKGLCQLAKPYEPGVFIGKIKPNNPSRAFLGYVDKEASEKKIVRDVFNIGDSAFISGDILVADELGYLYFRDRTGDTFRWRGENVSTTEVEAAVSRCANQRDAVVYGVEIPNTEGRAGMCGIVDIEGTLDLDKLAKDIAKDLPKYARPIFIRIMTSVDMTGTFKMKKVDLQKEGYNPSTVSDKMFFFEPKQNKYVPLGVEEYEKIISGATQRCVSNLLSTGRRSSVRRLSLRKLVATMIALAVAAGVFAAAWLNIGFYYSLTASVLLVVLYLILVQKKFCYVAIKTIPRDVKALYTYIQILWITRKFSKLNLTVPDIFHDTVQKHPDKACFLFKDEVWTFKENTSVGLPRRDTNLPNVMRKASF

Uniprot

B3Y9F5   H9J9J2   A0A2W1BH93   A0A2A4K9F2   E3WCW7   A0A1V0M8C5   + More
A0A2H1W3D4   A0A0P0EW49   E3WCW8   A0A212EVS6   A0A194PMG1   A0A1L8D6P9   A0A2A4K8S3   A0A0P0DZ69   A0A1V0M8B7   A0A212EVU7   A0A194R363   E2A3N0   D6WL30   A0A151JSV1   A0A151I6U0   A0A1Q3FPG3   A0A1Q3FZG9   A0A195ATB4   A0A023EVP1   A0A158NPT0   A0A182GFA7   T1PEH3   A0A1I8N9H8   A0A1I8N9J3   A0A1B0GJK9   A0A0L0BY49   Q17NU2   A0A1S4EW84   A0A151X8U6   U5ESE1   A0A1I8NPD3   A0A2J7QH75   A0A1L8DYF8   A0A1L8DYP1   A0A1L8DYA9   E2BZR6   B0WIY6   B4LUL2   A0A034V5Q4   A0A2J7QH78   F4W7G4   E9IX26   A0A182KF21   W8ATG7   A0A182VYN1   A0A182J0T5   A0A2A3E8B6   B4MWZ3   A0A0C9RBI1   A0A182LYD0   A0A1W4XQ51   W5J1E2   A0A1S4GCX4   A0A2M3ZA05   Q7PY63   A0A0A1X4F7   A0A182QWM1   A0A182U1S3   A0A182FBP1   A0A182XWA4   A0A182RNE7   A0A1B6CWE8   A0A182HFD0   B3MJK0   A0A182N6Z6   B4KKS4   U4UTR7   A0A232F9W6   A0A3L8DBH0   N6UFM8   A0A026WJP3   K7IPY2   A0A023F4V7   B4JE93   A0A0P4VH86   B4P0Q7   A0A0K8W693   B3N5E1   A0A1A9WHX4   A0A1J1I3Q2   A0A1W4UFG6   A0A034VA16   Q29KS1   B4GSW2   A0A034VAM7   A0A0V0G3I3   A0A1B0BTK8   A0A146M6B7  

Pubmed

19112106    19121390    28756777    20875854    28349297    26445454    + More
22118469    26354079    20798317    18362917    19820115    24945155    21347285    26483478    25315136    26108605    17510324    17994087    25348373    21719571    21282665    24495485    20920257    23761445    12364791    25830018    25244985    23537049    28648823    30249741    24508170    20075255    25474469    27129103    17550304    18057021    15632085    26823975   

EMBL

AB451529    BAG68297.1    BABH01004921    BABH01004922    KZ150176    PZC72567.1    + More
NWSH01000026    PCG80606.1    AB561865    BAJ33523.1    KU755519    ARD71229.1    ODYU01006048    SOQ47558.1    KT261734    ALJ30274.1    AB561866    BAJ33524.1    AGBW02012128    OWR45592.1    KQ459601    KPI93924.1    GEYN01000119    JAV02010.1    PCG80607.1    KT261735    ALJ30275.1    KU755520    ARD71230.1    OWR45591.1    KQ460855    KPJ11959.1    GL436457    EFN71922.1    KQ971343    EFA03519.2    KQ982014    KYN30653.1    KQ978456    KYM93879.1    GFDL01005560    JAV29485.1    GFDL01002084    JAV32961.1    KQ976745    KYM75463.1    GAPW01000350    JAC13248.1    ADTU01022742    ADTU01022743    JXUM01001108    JXUM01001109    KQ560116    KXJ84416.1    KA646525    AFP61154.1    AJWK01021905    AJWK01021906    AJWK01021907    AJWK01021908    AJWK01021909    AJWK01021910    AJWK01021911    JRES01001167    KNC24896.1    CH477196    EAT48382.1    KQ982409    KYQ56708.1    GANO01002398    JAB57473.1    NEVH01013990    PNF27940.1    GFDF01002628    JAV11456.1    GFDF01002506    JAV11578.1    GFDF01002651    JAV11433.1    GL451657    EFN78828.1    DS231954    EDS28847.1    CH940649    EDW64198.1    GAKP01020345    GAKP01020341    JAC38611.1    PNF27941.1    GL887844    EGI69837.1    GL766616    EFZ14911.1    GAMC01014421    GAMC01014420    JAB92135.1    KZ288325    PBC27997.1    CH963857    EDW76632.1    GBYB01004241    GBYB01004242    JAG74008.1    JAG74009.1    AXCM01004450    ADMH02002183    ETN57977.1    AAAB01008987    GGFM01004615    MBW25366.1    EAA01228.5    GBXI01008652    JAD05640.1    AXCN02000314    GEDC01019541    JAS17757.1    JXUM01037594    KQ561134    KXJ79609.1    CH902620    EDV32368.1    CH933807    EDW12738.1    KB632364    ERL93540.1    NNAY01000564    OXU27644.1    QOIP01000011    RLU17248.1    APGK01037735    KB740948    ENN77457.1    KK107183    EZA55891.1    GBBI01002688    JAC16024.1    CH916368    EDW03613.1    GDKW01002815    JAI53780.1    CM000157    EDW87952.1    KRJ97506.1    GDHF01005924    JAI46390.1    CH954177    EDV59020.1    KQS70597.1    CVRI01000036    CRK92993.1    GAKP01020346    GAKP01020342    JAC38610.1    CH379061    EAL33103.3    CH479189    EDW25471.1    GAKP01020344    JAC38608.1    GECL01003465    JAP02659.1    JXJN01020215    GDHC01003326    JAQ15303.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000000311    + More
UP000007266    UP000078541    UP000078542    UP000078540    UP000005205    UP000069940    UP000249989    UP000095301    UP000092461    UP000037069    UP000008820    UP000075809    UP000095300    UP000235965    UP000008237    UP000002320    UP000008792    UP000007755    UP000075881    UP000075920    UP000075880    UP000242457    UP000007798    UP000075883    UP000192223    UP000000673    UP000007062    UP000075886    UP000075902    UP000069272    UP000076408    UP000075900    UP000007801    UP000075884    UP000009192    UP000030742    UP000215335    UP000279307    UP000019118    UP000053097    UP000002358    UP000001070    UP000002282    UP000008711    UP000091820    UP000183832    UP000192221    UP000001819    UP000008744    UP000092460   

PRIDE

B3Y9F5    H9J9J2   

Pfam

PF13193   AMP-binding_C        + More
PF00501   AMP-binding
PF06417   DUF1077

Interpro

IPR020845   AMP-binding_CS        + More
IPR042099   AMP-dep_Synthh-like_sf       
IPR000873   AMP-dep_Synth/Lig       
IPR025110   AMP-bd_C       
IPR009445   TMEM85/Emc4       
IPR030304   FATP4       

Gene 3D

3.40.50.12780    

CDD

cd05939  hsFATP4_like

ProteinModelPortal

B3Y9F5   H9J9J2   A0A2W1BH93   A0A2A4K9F2   E3WCW7   A0A1V0M8C5   + More
A0A2H1W3D4   A0A0P0EW49   E3WCW8   A0A212EVS6   A0A194PMG1   A0A1L8D6P9   A0A2A4K8S3   A0A0P0DZ69   A0A1V0M8B7   A0A212EVU7   A0A194R363   E2A3N0   D6WL30   A0A151JSV1   A0A151I6U0   A0A1Q3FPG3   A0A1Q3FZG9   A0A195ATB4   A0A023EVP1   A0A158NPT0   A0A182GFA7   T1PEH3   A0A1I8N9H8   A0A1I8N9J3   A0A1B0GJK9   A0A0L0BY49   Q17NU2   A0A1S4EW84   A0A151X8U6   U5ESE1   A0A1I8NPD3   A0A2J7QH75   A0A1L8DYF8   A0A1L8DYP1   A0A1L8DYA9   E2BZR6   B0WIY6   B4LUL2   A0A034V5Q4   A0A2J7QH78   F4W7G4   E9IX26   A0A182KF21   W8ATG7   A0A182VYN1   A0A182J0T5   A0A2A3E8B6   B4MWZ3   A0A0C9RBI1   A0A182LYD0   A0A1W4XQ51   W5J1E2   A0A1S4GCX4   A0A2M3ZA05   Q7PY63   A0A0A1X4F7   A0A182QWM1   A0A182U1S3   A0A182FBP1   A0A182XWA4   A0A182RNE7   A0A1B6CWE8   A0A182HFD0   B3MJK0   A0A182N6Z6   B4KKS4   U4UTR7   A0A232F9W6   A0A3L8DBH0   N6UFM8   A0A026WJP3   K7IPY2   A0A023F4V7   B4JE93   A0A0P4VH86   B4P0Q7   A0A0K8W693   B3N5E1   A0A1A9WHX4   A0A1J1I3Q2   A0A1W4UFG6   A0A034VA16   Q29KS1   B4GSW2   A0A034VAM7   A0A0V0G3I3   A0A1B0BTK8   A0A146M6B7  

PDB

3R44     E-value=6.89473e-13,     Score=182

KEGG

100174941    K08745 solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-] | (RefSeq) Fatp; f

GO

GO:0003824   GO:0016021   GO:0005324   GO:0070328   GO:0004467   GO:0005783   GO:0016874   GO:0015908   GO:0031957   GO:0008152   GO:0006355   GO:0008270   GO:0043565   GO:0043401   GO:0003677   GO:0003707   GO:0004651   GO:0005634  

Length:

829

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

109.81164

Exp number, first 60 AAs:

32.5758

Total prob of N-in:

0.63111

POSSIBLE N-term signal

sequence

outside

1  -  24

TMhelix

25  -  45

inside

46  -  51

TMhelix

52  -  74

outside

75  -  321

TMhelix

322  -  344

inside

345  -  693

TMhelix

694  -  716

outside

717  -  719

TMhelix

720  -  740

inside

741  -  829

 

 

Pi

197.399683

Theta

17.879875

Tajima's D

0.23602

CLR

13.563295

CSRT

0.43632818359082

Interpretation

Uncertain