SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01840  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006177
Annotation
Uncharacterized_protein_OBRU01_15943_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 2.49
 

Sequence

CDS
ATGGATAAATATCCAATGATAAGTGATGAATTTGATGGTATAAATTTAGAAAGAGGAAAGTCAGGAGTATTTGAAATAGAAGATCTCGTAGAATTACTTAAGCGTGAGAATTCTAGGGATATCTTCGTGGCAACTGTACCCCAGGACATCAGATATGTTGATTATATTTGCATTGTGAGTGCCCGCAGTAAGAGGCATATTCAAGCTCTTGCAGAGTTTGTGAGGAAAGTCTACAAAAAGAAACGTTGTCAAAGTGATCTTATTCCAAGGATTGAAGGAAAAGATTCAGGTCAATGGGTTGCACTGGATTTAGGCAACATTGCACTACATATATTTTCAGATAGCACAAGAAAAATGTATGATCTAGAAACCTTATGGTCTGTTGGGCCAGAATTTGATGGACAGATTAACAAAAAAAGTGATGTTATAGATGTATTTGAGAACTATAGTGCTTATTTGAAAGATTTGAAACCATTATCATAA
Protein
MDKYPMISDEFDGINLERGKSGVFEIEDLVELLKRENSRDIFVATVPQDIRYVDYICIVSARSKRHIQALAEFVRKVYKKKRCQSDLIPRIEGKDSGQWVALDLGNIALHIFSDSTRKMYDLETLWSVGPEFDGQINKKSDVIDVFENYSAYLKDLKPLS

Summary

EMBL
JTDY01004526    KOB68044.1    AGBW02010086    OWR49181.1    NWSH01001848    PCG69929.1    + More
KQ459601    KPI93938.1    GAIX01014783    JAA77777.1    KQ460855    KPJ11942.1    ODYU01004889    SOQ45225.1    RSAL01000014    RVE53284.1    LJIG01022520    KRT80144.1    PCG69926.1    AXCM01003001    ATLV01023101    KE525340    KFB48456.1    APCN01004657    AAAB01008948    EAA10357.3    KQ434819    KZC06887.1    GEZM01087621    JAV58565.1    AXCN02000977    CH478333    EAT33213.1    CH477637    EAT37975.1    GAPW01003444    JAC10154.1    JXUM01087699    KQ563653    KXJ73555.1    KQ414722    KOC62703.1    JXUM01024331    KQ560687    KXJ81270.1    DS232126    EDS35570.1    KQ971343    EFA03531.2    GFDL01012852    JAV22193.1    NEVH01010479    PNF32412.1    GEDC01010824    JAS26474.1    KZ288250    PBC31074.1    NNAY01000461    OXU28219.1    JRES01001641    KNC21278.1    GL452203    EFN77761.1    KK852595    KDR20627.1    AJVK01032790    KA648163    AFP62792.1    GGFM01007940    MBW28691.1    GEBQ01010682    JAT29295.1    GGFM01005410    MBW26161.1    GDHF01022293    JAI30021.1    GGFK01007892    MBW41213.1    GFDF01005131    JAV08953.1    KQ765234    OAD54008.1    KQ981873    KYN34023.1    GAKP01009352    JAC49600.1    GL438386    EFN69055.1    GGFM01007892    MBW28643.1    AJWK01027565    GGFM01005337    MBW26088.1    GDAI01001012    JAI16591.1    GL888190    EGI65465.1    KQ977890    KYM98986.1    LBMM01002638    KMQ94540.1    KQ979011    KYN26626.1    KK107238    EZA54780.1    QOIP01000007    RLU20072.1    GGFJ01008983    MBW58124.1    CVRI01000043    CRK95911.1    GGFL01005810    MBW69988.1    GGFL01005811    MBW69989.1    ADTU01020331    GGFJ01009236    MBW58377.1    GECU01010362    JAS97344.1    GL768105    EFZ12239.1    KB632100    KI210474    ERL88811.1    ERL96279.1    KQ976395    KYM93091.1    APGK01041798    KB740997    ENN75885.1    KQ982584    KYQ54406.1    KK855123    PTY21002.1    GECZ01009542    JAS60227.1    DS235874    EEB19681.1    UFQS01003263    UFQT01003263    SSX15429.1    SSX34798.1    EZ424006    ADD20282.1    CH916366    EDV97010.1    PYGN01001080    PSN37790.1    CP012525    ALC44980.1    ALC42837.1    CH940647    EDW69037.1    AK342097    BAH72261.1    UFQS01004071    UFQT01004071    SSX16150.1    SSX35476.1   
Interpro
IPR004394   Iojap/RsfS/C7orf30       
PDB
5OOM     E-value=1.54112e-24,     Score=274

Ontologies

Topology

Length:
160
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00633
Exp number, first 60 AAs:
0.00086
Total prob of N-in:
0.14548
outside
1  -  160
 
 

Population Genetic Test Statistics

Pi
147.810327
Theta
171.423573
Tajima's D
-0.512556
CLR
17.508999
CSRT
0.240037998100095
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号