Gene

KWMTBOMO01830

Pre Gene Modal

BGIBMGA005976

Annotation

PREDICTED:_NHL_repeat-containing_protein_2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr4(-):5839442-5854645      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.558 PlasmaMembrane   Reliability : 1.594

CDS

ATGGAGCACAGCCCCTTAGACTTTGTAGCTCAATCATGTATGGATCTCACTGAAGCTCTAAGTAGTGCAAACAACGAAGCTGAACGTGACACTCTAATAAATAACCATATCAAGAAAGTATGGCCGTGCGTGGCACCAGTCGAAGACTTCAAAAAGAGTTTAGAGTGGATCAATGTTTCAGAACCAATAATTCTGTCGCAGCATTGCCTCAATAAGGTGGTAGTGTTGGACTTCTGGACTTATTGTTGTATAAACTGTTATCATGTTCTACCCGACCTGGCACATTTAGAAAAACTGTATACAGTTGAAAATGGACTTGTTGTAATTGGTGTACATTCAGCTAAATTCCTAAATGAAAAAGACTACAGTAAGGTTGCAGCTGCTGTTCAACGGTACAACATTCAGCATCCCGTTGTGAATGATGCTGAGAGTTCTGTTTGGGAAGCTCTTGGTATTAAGTGTTGGCCCACTATACTTATACTTGGTCTCGGTTGCAAACCATTATTTGTCTTTACTGGAGAAGGTCATAAAGATGAGCTGGTGATGTTTGTTGATGCAACATTAAAACATTTTTCATCACGGATATCAAATGCTGCATTGCCCATTGCAATTTCAAACCAAACCAAATCTAAAGAAGATGATGTTCTCTCATTTCCCAGTAAGCTGGCGCTGAATACATTCTACAAAGGTAGATCAGAAGAACCATTCCTAGCTATTGCTGATACGGGCCACCACCGTGTTCTGTTGACGGACTGTTCTGGAATCGTCTTACGTATCATTGGAGGACCAAAACCCGGATTTAAAGATGGAAAGTTTGCCGAAGCCCAATTCAATACGCCCCAGGGTCTGTGCTGGCTGTCAAGTACAGTGCTAGCAGTCTGTGACACCAACAATCACGCGCTGCGAGCCATACACCTTGACGACGGTACCGTGGAGCTGCTGGCCGGGACGGGACAGCAGAGCGCGCATGGAGACCTAGGAGGTAAATGTCTCGGAATGCAACCGCTATCGTCGCCGTGGGACGTGGTCCTGTACAGCACCCCGGACCTCGACATGTCGGTGCGACCTCTCCTCCCGCCGCCCCGACCCCCGGGACAACCCGCAGACGCCGACAGAAACGACAAAAGCAACAAACCAGAGGCTACCGATAAAGAGAAGAAGGATGAAAAGCGACGCGTACTCGTGATAGCTTGCGCCGGCTCCCATCAGATCTGGGCGCTGTTCCTGGACACTACCATTTGGTGGAAATACAAAACGTATACTGAAGGTACGTGCGCGTGCATAGCGGGGTCGGGCGCGGAGGCGGCGCGGAACAGCGCCTACCCCAACACGGCGGCCTTCGCGCAGCCTGGGGGACTCACCATCAGGAACGGTTCAAATCCGGAAATGTTCATAGCGGATTCGGAGAGCTCCTCAATAAGACGACTTGCATTAAATACTGGTCAGGTGTCCACGTTGTGCGGCGGGGACCGTAATCCCCTGAATCTGTTTGCTTTCGGTGACGTCGACGAGATAGGAGTAGACGCCAAGTTTCAGCATCCGCTGGCCGTCGCTTATTGCGAGACCTCCAAAGTTCTGTACGTGGCCGATACGTACAATCACAAAATCAAGAAAGTAGACATCGGCCTGCAGAAGGTGACGTCACTGAACCCGACCAAGATCGAAACGACGGAGCCGGCGCAATTCAACGAACCCTCCGGTATATCGATCAGTCCCGACGGGAAATATCTATACGTGGCCGACACGAACAATCACAGCGTTAGAATCGTTAATCTAGTTAAGAACGTTTGTCAAGACCTGAAGGTGCGCCTCGCCGAGCCCAAGTTCACGGAGCCGGAGAACTTGATACTGTACAAAAGCGATCTCTTCGTGAACAGGAAATGTGGCAGCTTAATCATATATTTCAATGTCAGCTTGGACGTTGATATAAAGAATGTTAAGTTCACACCTGGGGCGCCGCAGAATTGGCAAATCTGCGTCCGAGACAGCAACAATAAGGACGTGACGCTCGACGACTTCGATTTCGTCGGCTGCTCCAACAAAGGCTCGAAGCTCCCCGGCCGAGTCGATATGAAACTAAAGCAGAGAACAGATAAGACTCATTATCGCTTGTACCTCAGTTTCCATACGTCATTGTGCGACGCGTCGGTCTGTTTCTCTCACACGTTCACGATACGGTCCACGATTTTGGTTCGTGATTCCGTCAAAATGATCGAGTCGTACAAGATCACATGTAAAGTGAATCCCGTCAATCGTGACAGTAGAACTGATAAAACTGCCTCTTAA

Protein

MEHSPLDFVAQSCMDLTEALSSANNEAERDTLINNHIKKVWPCVAPVEDFKKSLEWINVSEPIILSQHCLNKVVVLDFWTYCCINCYHVLPDLAHLEKLYTVENGLVVIGVHSAKFLNEKDYSKVAAAVQRYNIQHPVVNDAESSVWEALGIKCWPTILILGLGCKPLFVFTGEGHKDELVMFVDATLKHFSSRISNAALPIAISNQTKSKEDDVLSFPSKLALNTFYKGRSEEPFLAIADTGHHRVLLTDCSGIVLRIIGGPKPGFKDGKFAEAQFNTPQGLCWLSSTVLAVCDTNNHALRAIHLDDGTVELLAGTGQQSAHGDLGGKCLGMQPLSSPWDVVLYSTPDLDMSVRPLLPPPRPPGQPADADRNDKSNKPEATDKEKKDEKRRVLVIACAGSHQIWALFLDTTIWWKYKTYTEGTCACIAGSGAEAARNSAYPNTAAFAQPGGLTIRNGSNPEMFIADSESSSIRRLALNTGQVSTLCGGDRNPLNLFAFGDVDEIGVDAKFQHPLAVAYCETSKVLYVADTYNHKIKKVDIGLQKVTSLNPTKIETTEPAQFNEPSGISISPDGKYLYVADTNNHSVRIVNLVKNVCQDLKVRLAEPKFTEPENLILYKSDLFVNRKCGSLIIYFNVSLDVDIKNVKFTPGAPQNWQICVRDSNNKDVTLDDFDFVGCSNKGSKLPGRVDMKLKQRTDKTHYRLYLSFHTSLCDASVCFSHTFTIRSTILVRDSVKMIESYKITCKVNPVNRDSRTDKTAS

Uniprot

H9J8Y4   A0A2H1WI66   A0A2A4K9P3   A0A212F627   A0A194PMI6   A0A194R2K8   + More
A0A437BSD2   Q17MM7   U4U324   A0A1Q3FDI3   N6TKS9   A0A182H9W5   A0A1W7R597   A0A023EV93   B0XF45   A0A336MR18   A0A1L8DBR7   A0A1B0D1V0   D6WBP1   E2BRP2   U5EQM6   A0A026WM80   A0A151J1I2   A0A1W4WZ41   A0A182QK42   A0A151I0M9   A0A158NIQ6   E2A9Z6   A0A084WI03   A0A1W4X9N6   A0A182FV29   A0A151JY45   W8AWQ2   A0A0K8VV94   A0A034W4G3   Q7Q8Q9   F4WDH5   E9IZN5   A0A182MVV8   W5JHF6   A0A182HFN3   A0A182JWS8   A0A2M4BDU0   A0A2M4BDR2   A0A2M4ACT0   A0A2M4BDL8   A0A1S4H4G5   A0A182MYG8   A0A182XPC6   A0A2M4ACE2   A0A182V6K8   A0A2M4ACQ6   A0A182UK54   A0A182JIX7   K7IMU5   A0A0A1X0U7   A0A0L0BQM6   A0A182YA67   A0A2M3YZ94   A0A154P3S8   A0A182R7U5   A0A2M3Z5I8   A0A2M3ZHC7   A0A151X0R6   A0A1A9WXD8   A0A1A9Z455   A0A3B0KII6   A0A0C9PYX8   A0A1I8QB78   A0A1A9UYS8   A0A182P8E0   A0A182T7P6   A0A1B0BTA5   A0A1W4VJV4   A0A3B0JTZ3   T1P9W9   A0A182W2H1   A0A1A9XLC7   B3NKH8   B4JAK2   A0A1I8MPR7   V4A8P4   A0A0M9ABA8   A0A1J1HPX2   A0A3B0JTY5   A0A088AFJ4   A0A2A3E476   A0A2A3E2N4   A0A0L7QKS7   A0A0R1DUC5   A0A0J7L5E3   B4KJ07   B4NP03   A0A232FCR6   B4LQY3   Q9W5T4   A0A0M4E542  

Pubmed

19121390    22118469    26354079    17510324    23537049    26483478    + More
24945155    18362917    19820115    20798317    24508170    30249741    21347285    24438588    24495485    25348373    12364791    21719571    21282665    20920257    23761445    20075255    25830018    26108605    25244985    17994087    25315136    23254933    17550304    28648823    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01004856    BABH01004857    BABH01004858    BABH01004859    ODYU01008500    SOQ52154.1    + More
NWSH01000024    PCG80624.1    AGBW02010086    OWR49190.1    KQ459601    KPI93949.1    KQ460855    KPJ11932.1    RSAL01000014    RVE53293.1    CH477204    EAT47994.1    KB632050    KI209184    ERL88294.1    ERL95992.1    GFDL01009415    JAV25630.1    APGK01020465    KB740202    ENN81044.1    JXUM01121475    KQ566504    KXJ70073.1    GEHC01001287    JAV46358.1    GAPW01000228    JAC13370.1    DS232895    EDS26458.1    UFQT01001628    SSX31233.1    GFDF01010202    JAV03882.1    AJVK01022393    KQ971311    EEZ98896.1    GL449978    EFN81636.1    GANO01003205    JAB56666.1    KK107152    QOIP01000007    EZA57063.1    RLU20467.1    KQ980522    KYN15690.1    AXCN02001045    KQ976615    KYM79275.1    ADTU01017047    GL437987    EFN69764.1    ATLV01023900    KE525347    KFB49847.1    KQ981554    KYN40019.1    GAMC01017334    GAMC01017332    JAB89223.1    GDHF01032957    GDHF01009525    JAI19357.1    JAI42789.1    GAKP01009932    JAC49020.1    AAAB01008933    EAA09865.4    GL888087    EGI67755.1    GL767232    EFZ13922.1    AXCM01004073    ADMH02001513    ETN62239.1    APCN01005544    GGFJ01002078    MBW51219.1    GGFJ01002006    MBW51147.1    GGFK01005273    MBW38594.1    GGFJ01002005    MBW51146.1    GGFK01005143    MBW38464.1    GGFK01005242    MBW38563.1    GBXI01009565    JAD04727.1    JRES01001511    KNC22352.1    GGFM01000810    MBW21561.1    KQ434803    KZC05994.1    GGFM01003031    MBW23782.1    GGFM01007124    MBW27875.1    KQ982603    KYQ53970.1    OUUW01000010    SPP85576.1    GBYB01006713    JAG76480.1    JXJN01020060    SPP85575.1    KA645469    AFP60098.1    CH954179    EDV54282.2    CH916368    EDW02788.1    KB201977    ESO93122.1    KQ435710    KOX79753.1    CVRI01000015    CRK90085.1    SPP85577.1    KZ288422    PBC25959.1    PBC25960.1    KQ414940    KOC59121.1    CM000157    KRJ98753.1    LBMM01000684    KMQ97768.1    CH933807    EDW13520.1    CH964289    EDW86092.1    NNAY01000428    OXU28465.1    CH940649    EDW64522.1    AY071316    AE013599    AAL48938.1    AGB93239.1    CP012523    ALC39158.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000283053    + More
UP000008820    UP000030742    UP000019118    UP000069940    UP000249989    UP000002320    UP000092462    UP000007266    UP000008237    UP000053097    UP000279307    UP000078492    UP000192223    UP000075886    UP000078540    UP000005205    UP000000311    UP000030765    UP000069272    UP000078541    UP000007062    UP000007755    UP000075883    UP000000673    UP000075840    UP000075881    UP000075884    UP000076407    UP000075903    UP000075902    UP000075880    UP000002358    UP000037069    UP000076408    UP000076502    UP000075900    UP000075809    UP000091820    UP000092445    UP000268350    UP000095300    UP000078200    UP000075885    UP000075901    UP000092460    UP000192221    UP000075920    UP000092443    UP000008711    UP000001070    UP000095301    UP000030746    UP000053105    UP000183832    UP000005203    UP000242457    UP000053825    UP000002282    UP000036403    UP000009192    UP000007798    UP000215335    UP000008792    UP000000803    UP000092553   

PRIDE

H9J8Y4    Q9W5T4   

Pfam

PF01436   NHL        + More
PF13905   Thioredoxin_8
PF08450   SGL
PF07061   Swi5
PF08174   Anillin

Interpro

IPR001258   NHL_repeat        + More
IPR011042   6-blade_b-propeller_TolB-like       
IPR036249   Thioredoxin-like_sf       
IPR013766   Thioredoxin_domain       
IPR012336   Thioredoxin-like_fold       
IPR013017   NHL_repeat_subgr       
IPR013658   SGL       
IPR000033   LDLR_classB_rpt       
IPR000477   RT_dom       
IPR010760   DNA-repair_Swi5       
IPR012966   AHD       

SUPFAM

SSF52833   SSF52833       

Gene 3D

2.120.10.30    

ProteinModelPortal

H9J8Y4   A0A2H1WI66   A0A2A4K9P3   A0A212F627   A0A194PMI6   A0A194R2K8   + More
A0A437BSD2   Q17MM7   U4U324   A0A1Q3FDI3   N6TKS9   A0A182H9W5   A0A1W7R597   A0A023EV93   B0XF45   A0A336MR18   A0A1L8DBR7   A0A1B0D1V0   D6WBP1   E2BRP2   U5EQM6   A0A026WM80   A0A151J1I2   A0A1W4WZ41   A0A182QK42   A0A151I0M9   A0A158NIQ6   E2A9Z6   A0A084WI03   A0A1W4X9N6   A0A182FV29   A0A151JY45   W8AWQ2   A0A0K8VV94   A0A034W4G3   Q7Q8Q9   F4WDH5   E9IZN5   A0A182MVV8   W5JHF6   A0A182HFN3   A0A182JWS8   A0A2M4BDU0   A0A2M4BDR2   A0A2M4ACT0   A0A2M4BDL8   A0A1S4H4G5   A0A182MYG8   A0A182XPC6   A0A2M4ACE2   A0A182V6K8   A0A2M4ACQ6   A0A182UK54   A0A182JIX7   K7IMU5   A0A0A1X0U7   A0A0L0BQM6   A0A182YA67   A0A2M3YZ94   A0A154P3S8   A0A182R7U5   A0A2M3Z5I8   A0A2M3ZHC7   A0A151X0R6   A0A1A9WXD8   A0A1A9Z455   A0A3B0KII6   A0A0C9PYX8   A0A1I8QB78   A0A1A9UYS8   A0A182P8E0   A0A182T7P6   A0A1B0BTA5   A0A1W4VJV4   A0A3B0JTZ3   T1P9W9   A0A182W2H1   A0A1A9XLC7   B3NKH8   B4JAK2   A0A1I8MPR7   V4A8P4   A0A0M9ABA8   A0A1J1HPX2   A0A3B0JTY5   A0A088AFJ4   A0A2A3E476   A0A2A3E2N4   A0A0L7QKS7   A0A0R1DUC5   A0A0J7L5E3   B4KJ07   B4NP03   A0A232FCR6   B4LQY3   Q9W5T4   A0A0M4E542  

PDB

6GC1     E-value=8.37622e-120,     Score=1104

KEGG

101744997    no KO assigned | (RefSeq) NHL repeat-containing protein 2

GO

GO:0045454   GO:0005623   GO:0061630   GO:0043161   GO:0000209   GO:0016021   GO:0005515   GO:0003676   GO:0008270   GO:0006357   GO:0032784   GO:0006355   GO:0006397   GO:0004651   GO:0005634  

Length:

761

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06857

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00139

outside

1  -  761

 

 

Pi

218.347172

Theta

198.373495

Tajima's D

1.03661

CLR

0.23536

CSRT

0.661166941652917

Interpretation

Uncertain