Gene

KWMTBOMO01829  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005977

Annotation

C-type_lectin_5_precursor_[Bombyx_mori]

Location

Bomo_Chr4(-):5793774-5820285      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.531

CDS

ATGCAGGCGTGGTTGGTGGTGGCTTTCGTAGCTGCGTTGTCGGTTCTCGCGACCGCACAGAAGCCCGGTCGTTTCCTGTCGCTTCCCGTTGCGCATAAATGTGCTAACAGACCAAAGGAATTCTTTTACCAAGGACACAACTACTTCTACAGCGGTCACGTTCCCGAGCTAGCCAACCGGAAAGTAGACTGGTTGGACGGACGCAACATTTGCCGTGAATACTGCATGGACCTCGTCTCTATGGAGACCCAGGAAGAAAACAATCTGATCTTCAAGCTCATCCAGCAGAACGATGTTCCCTACATTTGGACATCGGGACGTCTATGCGACTTCAAGGGATGTGAAACGCGAAAAGATCTCGAACCCAAGAACATTCTCGGCTGGTTCTGGTCCGCTAACCGAGAAAAGATCTCGCCCACTAATCAGATACCGAACCGTTGGGGCTACAACCCTTGGTCTCAGACCGGGCACAAGAAGCAGCGCCAACCTGACAACGCAGAGTACGATATCAACGGTACTTCGGAGTCTTGTTTGAGCGTCCTCAACAACGTTTACAACGACGGCATCGCCTGGCACGACGTAGCCTGTTATCACGAGAAGCCCATCGTATGCGAAGACTCCGAGGAATTACTGAACTACATCGCGAGCAATAATCCCGGTCTCCGTCTATAA

Protein

MQAWLVVAFVAALSVLATAQKPGRFLSLPVAHKCANRPKEFFYQGHNYFYSGHVPELANRKVDWLDGRNICREYCMDLVSMETQEENNLIFKLIQQNDVPYIWTSGRLCDFKGCETRKDLEPKNILGWFWSANREKISPTNQIPNRWGYNPWSQTGHKKQRQPDNAEYDINGTSESCLSVLNNVYNDGIAWHDVACYHEKPIVCEDSEELLNYIASNNPGLRL

Uniprot

Q2F5Q5   H9J8Y5   A0A096ZGV8   A0A3S2TRN8   A0A212EN51   A0A0H4SZC6   + More
I6RPF5   A0A2A4KA09   A0A194PS46   I4DLY5   I4DIH3   A0A219YXG4   D6WMQ9   A0A1W4XFW7   A0A1Y1KCI5   A0A195D4W9   A0A158NT65   A0A195EK58   K7ITK1   A0A232EQ47   N6UC69   B0WF13   A0A2H1WFI1   J3JVW0   A0A1B0CME0   A0A1Q3FPH0   A0A3L8DTE6   A0A310SN76   Q1HRD1   A0A182H9J5   A0A182N8K6   A0A023EIP1   A0A088AM42   A0A2A3E137   V9II58   A0A182YII5   A0A023ENM3   A0A182JCV2   A0A182PF77   A0A182R0I5   A0A182V1E8   A0A182KJP8   A0A182XB41   Q7Q0R9   A0A182R6T2   A0A182I0N6   E2B1M1   A0A084W641   A0A182LZC5   A0A182VT10   A0A2M4BYE5   A0A224XW22   T1DHR8   A0A182FQG1   T1H9B6   W5JHK1   A0A2M4AS58   A0A2M3ZE73   A0A0L7R4P7   A0A1D1Z3I4   A0A195F4X2   A0A154P861   A0A161MST6   A0A336L6G2   A0A146M885   A0A0A9XF86   E0VF89   A0A1B6LS38   A0A2K8JM51   A0A1B6LBN7   A0A1B6LFP1   A0A1V1FV79   B4KGY5   A0A2P8Y7L8   A0A0K8WGK6   A0A034W7C2   A0A0A1WQK2   B4LUA0   B4MTV9   A0A0M4DZU0   B3ML90   A0A1I8M961   A0A0L0CI81   A0A1I8PJJ0   A0A0J9QWM7   A0A0R1DJ38   B3N497   Q8SZK9   A0A067RE64   A0A1W4UW57   A0A3B0K941   B4I3C4   Q29LA7   B4GQC6   A0A1B0AIT4   B4NZ09   A0A1B0G4U4   A0A195BW36   F4WXS1   F2CR60  

Pubmed

19121390    22118469    26354079    22651552    18362917    19820115    + More
28004739    21347285    20075255    28648823    23537049    22516182    30249741    17204158    17510324    26483478    24945155    25244985    20966253    12364791    14747013    17210077    20798317    24438588    20920257    23761445    26823975    25401762    20566863    28410430    17994087    29403074    25348373    25830018    25315136    26108605    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    15632085    21719571    21415278   

EMBL

DQ311368    ABD36312.1    BABH01004853    KF752425    AIR96004.1    RSAL01000014    + More
RVE53294.1    AGBW02013714    OWR42922.1    KP406778    AKP99432.1    JQ899036    AFM52345.1    NWSH01000024    PCG80623.1    KQ459601    KPI93950.1    AK402303    BAM18925.1    AK401091    BAM17713.1    KX550115    AQY54432.1    KQ971341    EFA04637.1    GEZM01090233    JAV57325.1    KQ976842    KYN07950.1    ADTU01025611    ADTU01025612    KQ978801    KYN28249.1    NNAY01002846    OXU20447.1    APGK01040724    APGK01040725    APGK01040726    KB740984    ENN76247.1    DS231913    EDS25921.1    ODYU01008337    SOQ51840.1    BT127378    AEE62340.1    AJWK01018611    GFDL01005679    JAV29366.1    QOIP01000005    RLU23169.1    KQ762903    OAD55298.1    DQ440163    CH477724    ABF18196.1    EAT36882.1    JXUM01004738    KQ560180    KXJ83981.1    GAPW01004290    JAC09308.1    KZ288467    PBC25407.1    JR046299    AEY60171.1    GAPW01003073    JAC10525.1    AXCN02001838    AAAB01008980    EAA14156.2    APCN01005224    GL444953    EFN60377.1    ATLV01020721    KE525305    KFB45685.1    AXCM01000242    GGFJ01008938    MBW58079.1    GFTR01003756    JAW12670.1    GAMD01002201    JAA99389.1    ACPB03001102    ADMH02001231    ETN63566.1    GGFK01010290    MBW43611.1    GGFM01005979    MBW26730.1    KQ414657    KOC65840.1    GDJX01006478    JAT61458.1    KQ981805    KYN35508.1    KQ434823    KZC07300.1    GEMB01000603    JAS02529.1    UFQS01002176    UFQT01002176    SSX13418.1    SSX32852.1    GDHC01020080    GDHC01002666    JAP98548.1    JAQ15963.1    GBHO01024207    GBHO01024123    GBHO01024116    GBHO01024097    GBHO01017359    GBHO01011735    GBHO01011734    GBHO01011730    JAG19397.1    JAG19481.1    JAG19488.1    JAG19507.1    JAG26245.1    JAG31869.1    JAG31870.1    JAG31874.1    DS235107    EEB12045.1    GEBQ01013512    JAT26465.1    KY031157    ATU82908.1    GEBQ01018878    JAT21099.1    GEBQ01017464    JAT22513.1    FX985255    BAX07268.1    CH933807    EDW11185.1    PYGN01000830    PSN40258.1    GDHF01002110    JAI50204.1    GAKP01008343    JAC50609.1    GBXI01013140    JAD01152.1    CH940649    EDW64087.1    CH963852    EDW75548.2    CP012523    ALC38191.1    ALC39985.1    CH902620    EDV31708.1    JRES01000438    KNC31204.1    CM002910    KMY88119.1    CM000157    KRJ97291.1    CH954177    EDV57767.1    AE014134    AY070683    BT014659    AAF50981.4    AAL48154.1    AAT27283.1    AGB92582.1    KK852561    KDR21328.1    OUUW01000004    SPP80048.1    CH480820    EDW54269.1    CH379060    EAL34138.3    CH479187    EDW39798.1    EDW87673.2    CCAG010022902    KQ976403    KYM92176.1    GL888427    EGI60999.1    AK354112    BAJ85331.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053268    UP000007266    + More
UP000192223    UP000078542    UP000005205    UP000078492    UP000002358    UP000215335    UP000019118    UP000002320    UP000092461    UP000279307    UP000008820    UP000069940    UP000249989    UP000075884    UP000005203    UP000242457    UP000076408    UP000075880    UP000075885    UP000075886    UP000075903    UP000075882    UP000076407    UP000007062    UP000075900    UP000075840    UP000000311    UP000030765    UP000075883    UP000075920    UP000069272    UP000015103    UP000000673    UP000053825    UP000078541    UP000076502    UP000009046    UP000009192    UP000245037    UP000008792    UP000007798    UP000092553    UP000007801    UP000095301    UP000037069    UP000095300    UP000002282    UP000008711    UP000000803    UP000027135    UP000192221    UP000268350    UP000001292    UP000001819    UP000008744    UP000092445    UP000092444    UP000078540    UP000007755   

PRIDE

Q2F5Q5    H9J8Y5    Q8SZK9   

Pfam

PF00059   Lectin_C

Interpro

IPR001304   C-type_lectin-like        + More
IPR016186   C-type_lectin-like/link_sf       
IPR016187   CTDL_fold       
IPR018378   C-type_lectin_CS       

SUPFAM

SSF56436   SSF56436       

Gene 3D

3.10.100.10    

ProteinModelPortal

Q2F5Q5   H9J8Y5   A0A096ZGV8   A0A3S2TRN8   A0A212EN51   A0A0H4SZC6   + More
I6RPF5   A0A2A4KA09   A0A194PS46   I4DLY5   I4DIH3   A0A219YXG4   D6WMQ9   A0A1W4XFW7   A0A1Y1KCI5   A0A195D4W9   A0A158NT65   A0A195EK58   K7ITK1   A0A232EQ47   N6UC69   B0WF13   A0A2H1WFI1   J3JVW0   A0A1B0CME0   A0A1Q3FPH0   A0A3L8DTE6   A0A310SN76   Q1HRD1   A0A182H9J5   A0A182N8K6   A0A023EIP1   A0A088AM42   A0A2A3E137   V9II58   A0A182YII5   A0A023ENM3   A0A182JCV2   A0A182PF77   A0A182R0I5   A0A182V1E8   A0A182KJP8   A0A182XB41   Q7Q0R9   A0A182R6T2   A0A182I0N6   E2B1M1   A0A084W641   A0A182LZC5   A0A182VT10   A0A2M4BYE5   A0A224XW22   T1DHR8   A0A182FQG1   T1H9B6   W5JHK1   A0A2M4AS58   A0A2M3ZE73   A0A0L7R4P7   A0A1D1Z3I4   A0A195F4X2   A0A154P861   A0A161MST6   A0A336L6G2   A0A146M885   A0A0A9XF86   E0VF89   A0A1B6LS38   A0A2K8JM51   A0A1B6LBN7   A0A1B6LFP1   A0A1V1FV79   B4KGY5   A0A2P8Y7L8   A0A0K8WGK6   A0A034W7C2   A0A0A1WQK2   B4LUA0   B4MTV9   A0A0M4DZU0   B3ML90   A0A1I8M961   A0A0L0CI81   A0A1I8PJJ0   A0A0J9QWM7   A0A0R1DJ38   B3N497   Q8SZK9   A0A067RE64   A0A1W4UW57   A0A3B0K941   B4I3C4   Q29LA7   B4GQC6   A0A1B0AIT4   B4NZ09   A0A1B0G4U4   A0A195BW36   F4WXS1   F2CR60  

KEGG

692946    no KO assigned | (RefSeq) CTL5, BmCTL5; C-type lectin 5

GO

GO:0030246   GO:0016021  

SignalP

Position:   1 - 19,         Likelihood:  0.996298

 

 

Length:

223

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.75146

Exp number, first 60 AAs:

5.75146

Total prob of N-in:

0.32037

outside

1  -  223

 

 

Pi

23.444775

Theta

186.560149

Tajima's D

0.561017

CLR

0.636001

CSRT

0.530123493825309

Interpretation

Uncertain