SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01828
Pre Gene Modal
BGIBMGA006174
Annotation
PREDICTED:_uncharacterized_protein_LOC106127707_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 3.909
 

Sequence

CDS
ATGAACATTAACATAACGACGTTTATAAACCCTTTTTCTTTTTTTTGTATGCCTGAGGCTAGTCAGAAAATTAACTTACCTGAAAATGACCAAATACTTTCGTCTCCAAATGTGGGCAGTAGCATCGATCCATCCAAAGTCAATCACGGCCAATATGTCGCAGTATTATGGCAAAGCAGGTGGACGCGTGGTATAATTACTATGGAATCACAGTGCTTAATATGGTTAATAGATTTTGGTATTTATTTAAGACCTAATGAAAAAACTGTGTTTATAAGCCTACCTCCAGAGTACAAAAAGTTGCCAACTAAAGTATTTGAAGCCAGTATACATGGAGTCATGCCTCTGGATAAAAGAATCAATGAAAGTTGTGAGATTGAGAATCAGATTTGTACCAACTGGAATAAAGGTGCCATTGAAAAAATGCAAGAGATCATAAAGTATTCCAAACGGCTTTATTTTGTTCCTGTGGCTGTTATTTCTACCAAAGAAAACGACGTAGTGTTGGGAAATTTGTATTTTGAAGCAAGCGGATGTAGTTCTCTCGTAAACATTGTCGACGAGTTAGAAGGATGGCCAGTATTTTTAGAAAAGAATGAGAGCGCTTACATTCAAAATCTATCGGTTCTATACTCAAACCGTAGACGACATCGTGCGTGCCTGCTAAAACCTTTACCAAATGTAACCATACCTAACATTTCAACGAATTTGTCTTTAGAAGAATATAATAGTATTTGTGGTAAGGTTCTTGACATCTGTGAAGCCAGGAAGTCCGATTGTGCTTCGGAAGATGGCAGCACTGTGGTCAACGCAAAATTAAAGGAACAGAAAACAATCTACACATTAACATTTGAAGAAATAGAAATGTACTCCAATATGTACATTACTATAGCGGGTCAGGAGTATAATGCTTTGAATTTGTTGTTGAATAAAATCAGAGATCTTAGAATGTGTGAAAAATACAAAAATGCTAAACCAATCGGAAGAGCTACGACCAGATTAGGATCTACTCATAATTGA
Protein
MNINITTFINPFSFFCMPEASQKINLPENDQILSSPNVGSSIDPSKVNHGQYVAVLWQSRWTRGIITMESQCLIWLIDFGIYLRPNEKTVFISLPPEYKKLPTKVFEASIHGVMPLDKRINESCEIENQICTNWNKGAIEKMQEIIKYSKRLYFVPVAVISTKENDVVLGNLYFEASGCSSLVNIVDELEGWPVFLEKNESAYIQNLSVLYSNRRRHRACLLKPLPNVTIPNISTNLSLEEYNSICGKVLDICEARKSDCASEDGSTVVNAKLKEQKTIYTLTFEEIEMYSNMYITIAGQEYNALNLLLNKIRDLRMCEKYKNAKPIGRATTRLGSTHN

Summary

Pfam
PF00567   TUDOR
Interpro
IPR035437   SNase_OB-fold_sf        + More
IPR002999   Tudor       
Gene 3D

Ontologies

GO

Topology

Length:
339
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18632
Exp number, first 60 AAs:
0.00204
Total prob of N-in:
0.03711
outside
1  -  339
 
 

Population Genetic Test Statistics

Pi
258.395472
Theta
180.387782
Tajima's D
1.381163
CLR
0.492472
CSRT
0.75941202939853
Interpretation
Uncertain
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