Silkworm Genome Informatics Database

Gene

KWMTBOMO01822

Annotation

PREDICTED:_uncharacterized_protein_LOC106143070_[Amyelois_transitella]

Location

Bomo_Chr4(-):5707888-5709181 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.749

CDS

ATGAGAAGAGAGAATATAACTGTTACAGTTGATGAAACGCAAGCGTATTTTGTAGAGCCAGGGATTTTAAACCATGAAAAAGATACAGAATTGTTTATTGGTGGCGTTACTGAAGAGAATCCTATGGCCAAAAAAATGTTTCCGAACAATTTAAAAGGTTGCATAGACAACATATCAACGAAAGAAAACAGTTATATCAACAACTTTACCGAAGTTTACAGCAAAAATATCAAGTCCTGCCAATTATTCCCTCCGACTTAA

Protein

MRRENITVTVDETQAYFVEPGILNHEKDTELFIGGVTEENPMAKKMFPNNLKGCIDNISTKENSYINNFTEVYSKNIKSCQLFPPT

Uniprot

A0A2A4K8U8 A0A1E1VZY9 A0A2H1W0X1 A0A194PKV1 A0A0N0PFH3 A0A0L7LRT7 + More

Pubmed

26354079 26227816

EMBL

NWSH01000024 PCG80641.1 GDQN01010802 JAT80252.1 ODYU01005662 SOQ46750.1 + More
KQ459601 KPI93957.1 LADJ01005658 KPJ20882.1 JTDY01000281 KOB77926.1

Proteomes

UP000218220 UP000053268 UP000053240 UP000037510

Pfam

PF02210   Laminin_G_2        + More
PF00008   EGF
PF12661   hEGF

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR001881   EGF-like_Ca-bd_dom
IPR000152   EGF-type_Asp/Asn_hydroxyl_site
IPR000742   EGF-like_dom
IPR001791   Laminin_G
IPR018097   EGF_Ca-bd_CS
IPR013032   EGF-like_CS
IPR009030   Growth_fac_rcpt_cys_sf

SUPFAM

SSF49899 SSF49899 + More
SSF57184 SSF57184

ProteinModelPortal

A0A2A4K8U8 A0A1E1VZY9 A0A2H1W0X1 A0A194PKV1 A0A0N0PFH3 A0A0L7LRT7 + More

KEGG

NA

GO

GO:0005509

Length:

86

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.67170

inside

1 - 86

Pi

31.995989

Theta

28.632183

Tajima's D

0.558361

CLR

0.255277

CSRT

0.538573071346433

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics