Gene

KWMTBOMO01808

Pre Gene Modal

BGIBMGA005989

Annotation

hypothetical_protein_KGM_03125_[Danaus_plexippus]

Location

Bomo_Chr4(-):5228051-5259471      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.723

CDS

ATGTTCGGGTCCGGAGGCGCGTGCGCAGCTTGCGGGCAAGCGATACCGGCCAGCGAATTCGTGATGAGAACGAACGCGCCCCAACAACCGCTTCACGTCTTCCACATAAAGTGCTTCGCGTGCTCCAAATGCGGCTCCCACCTCATGCAAGGCGATAGGTATTATATGCTCGCGGGCTCATTAGTTTGCGAGCAGGATTGGCAGAAGCTAATGAAGAGCGCGAACGCAACAGGTCAGGGCGCTACTGCTCCCGTGCGCAAAGGCAAGGTCGGCCGCCCTCGCCGCTCGCGGGAATGA

Protein

MFGSGGACAACGQAIPASEFVMRTNAPQQPLHVFHIKCFACSKCGSHLMQGDRYYMLAGSLVCEQDWQKLMKSANATGQGATAPVRKGKVGRPRRSRE

Uniprot

H9J8Z7   A0A194R308   A0A212FDQ7   A0A194PS76   A0A2H1WIF6   A0A2A4JAB2   + More
A0A0T6B019   A0A139WIH6   E0VJT3   U4UMW5   A0A1B6CPF1   A0A1B6K7W7   Q7PNG5   N6U9M2   A0A0A9ZCG3   A0A1Y1KB82   A0A1Y1KBK7   A0A1W4XTL5   A0A1B6CIM7   A0A0K8SF66   A0A0K8SF69   A0A182MGB4   A0A182W9Z0   A0A182YGS2   A0A182WTI2   A0A182MZG1   A0A182R3B4   A0A182K133   A0A182S727   A0A182UZN7   W5JM32   A0A336LXC3   A0A182L2E1   A0A182J556   A0A084WUA8   U5EZU6   A0A067QXU8   Q17LX6   B0WGC9   A0A3L8DC08   A0A1L8DIJ1   A0A1L8DIV0   A0A2P8ZBA0   A0A2J7RG08   A0A1J1IN44   A0A158NEA3   A0A182QKJ6   A0A1D2N6U7   A0A0Q9XDP0   A0A1B0CYH0   B4MG37   B4KJJ4   B4HWH7   B4Q8R0   B4NZ65   Q9VL21   A0A1W4UFZ6   B3MPN1   B3N941   A0A2Y9D0T5   E2B649   A0A026W4A2   A0A195FK45   A0A226D262   A0A0L7QRR8   A0A087ZPJ0   F4WJC3   A0A0M9A1C4   A0A195CAR8   E2A0B0   A0A0J7KS43   A0A154PEB6   A0A195BVF5   A0A151J0C4   A0A151WSL7   B7Q5A7   A0A090X962   A0A131XQS7   K7IYP0   A0A2R5LGM8   A0A131XKW9   A0A1E1WW67   L7MGT5   A0A0P4YV14   A0A2P6L8R5   A0A131Z159   A0A224Z308   A0A164YS73   A0A0P6I9F4  

Pubmed

19121390    26354079    22118469    18362917    19820115    20566863    + More
23537049    12364791    25401762    28004739    26823975    25244985    20920257    23761445    20966253    24438588    24845553    17510324    30249741    29403074    21347285    27289101    17994087    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18057021    20798317    24508170    21719571    25970599    29652888    20075255    28049606    28503490    25576852    26830274    28797301   

EMBL

BABH01004814    KQ460855    KPJ11904.1    AGBW02009012    OWR51871.1    KQ459601    + More
KPI93980.1    ODYU01008780    SOQ52682.1    NWSH01002391    PCG68380.1    LJIG01022461    KRT80453.1    KQ971342    KYB27651.1    DS235226    EEB13639.1    KB632288    ERL91506.1    GEDC01021990    GEDC01020442    JAS15308.1    JAS16856.1    GECU01000167    JAT07540.1    AAAB01008964    EAA12216.4    APGK01037536    APGK01037537    KB740948    ENN77346.1    GBHO01004099    JAG39505.1    GEZM01091395    JAV56855.1    GEZM01091394    JAV56856.1    GEDC01023999    JAS13299.1    GBRD01013894    GBRD01013891    GBRD01013890    GBRD01010839    JAG51932.1    GBRD01013893    GBRD01013892    GDHC01002823    JAG51933.1    JAQ15806.1    AXCM01014126    ADMH02000734    ETN65211.1    UFQT01000278    SSX22692.1    ATLV01027036    ATLV01027037    ATLV01027038    ATLV01027039    KE525421    KFB53802.1    GANO01000120    JAB59751.1    KK852846    KDR15103.1    CH477210    EAT47695.2    DS231925    EDS26888.1    QOIP01000010    RLU17663.1    GFDF01007821    JAV06263.1    GFDF01007820    JAV06264.1    PYGN01000117    PSN53777.1    NEVH01004407    PNF39763.1    CVRI01000055    CRL01584.1    ADTU01013187    ADTU01013188    ADTU01013189    ADTU01013190    ADTU01013191    ADTU01013192    ADTU01013193    AXCN02000609    LJIJ01000177    ODN00989.1    CH933807    KRG03882.1    AJVK01000212    CH940670    EDW65107.1    EDW13574.1    CH480818    EDW52372.1    CM000361    CM002910    EDX04475.1    KMY89432.1    CM000157    EDW88760.1    KRJ98007.1    AE014134    BT012487    AAF52877.2    AAN10724.1    AAS93758.1    CH902620    EDV32279.1    CH954177    EDV58476.1    KQS70411.1    APCN01005206    APCN01005207    GL445914    EFN88838.1    KK107455    EZA50431.1    KQ981490    KYN41040.1    LNIX01000042    OXA38964.1    KQ414772    KOC61323.1    GL888182    EGI65701.1    KQ435770    KOX75187.1    KQ978023    KYM97907.1    GL435569    EFN73113.1    LBMM01003719    KMQ93207.1    KQ434889    KZC10216.1    KQ976401    KYM92562.1    KQ980636    KYN14955.1    KQ982769    KYQ50844.1    ABJB010689269    ABJB010745220    DS860469    EEC14029.1    GBIH01001533    JAC93177.1    GEFM01006183    GEGO01000993    JAP69613.1    JAR94411.1    GGLE01004555    MBY08681.1    GEFH01001374    JAP67207.1    GFAC01007919    JAT91269.1    GACK01002007    JAA63027.1    GDIP01223256    JAJ00146.1    MWRG01000932    PRD34973.1    GEDV01004025    JAP84532.1    GFPF01009448    MAA20594.1    LRGB01000868    KZS15545.1    GDIQ01007742    JAN86995.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000218220    UP000007266    + More
UP000009046    UP000030742    UP000007062    UP000019118    UP000192223    UP000075883    UP000075920    UP000076408    UP000076407    UP000075884    UP000075900    UP000075881    UP000075901    UP000075903    UP000000673    UP000075882    UP000075880    UP000030765    UP000027135    UP000008820    UP000002320    UP000279307    UP000245037    UP000235965    UP000183832    UP000005205    UP000075886    UP000094527    UP000009192    UP000092462    UP000008792    UP000001292    UP000000304    UP000002282    UP000000803    UP000192221    UP000007801    UP000008711    UP000075840    UP000008237    UP000053097    UP000078541    UP000198287    UP000053825    UP000005203    UP000007755    UP000053105    UP000078542    UP000000311    UP000036403    UP000076502    UP000078540    UP000078492    UP000075809    UP000001555    UP000002358    UP000076858   

PRIDE

H9J8Z7    Q9VL21   

Pfam

PF00412   LIM

Interpro

IPR001781   Znf_LIM       

ProteinModelPortal

H9J8Z7   A0A194R308   A0A212FDQ7   A0A194PS76   A0A2H1WIF6   A0A2A4JAB2   + More
A0A0T6B019   A0A139WIH6   E0VJT3   U4UMW5   A0A1B6CPF1   A0A1B6K7W7   Q7PNG5   N6U9M2   A0A0A9ZCG3   A0A1Y1KB82   A0A1Y1KBK7   A0A1W4XTL5   A0A1B6CIM7   A0A0K8SF66   A0A0K8SF69   A0A182MGB4   A0A182W9Z0   A0A182YGS2   A0A182WTI2   A0A182MZG1   A0A182R3B4   A0A182K133   A0A182S727   A0A182UZN7   W5JM32   A0A336LXC3   A0A182L2E1   A0A182J556   A0A084WUA8   U5EZU6   A0A067QXU8   Q17LX6   B0WGC9   A0A3L8DC08   A0A1L8DIJ1   A0A1L8DIV0   A0A2P8ZBA0   A0A2J7RG08   A0A1J1IN44   A0A158NEA3   A0A182QKJ6   A0A1D2N6U7   A0A0Q9XDP0   A0A1B0CYH0   B4MG37   B4KJJ4   B4HWH7   B4Q8R0   B4NZ65   Q9VL21   A0A1W4UFZ6   B3MPN1   B3N941   A0A2Y9D0T5   E2B649   A0A026W4A2   A0A195FK45   A0A226D262   A0A0L7QRR8   A0A087ZPJ0   F4WJC3   A0A0M9A1C4   A0A195CAR8   E2A0B0   A0A0J7KS43   A0A154PEB6   A0A195BVF5   A0A151J0C4   A0A151WSL7   B7Q5A7   A0A090X962   A0A131XQS7   K7IYP0   A0A2R5LGM8   A0A131XKW9   A0A1E1WW67   L7MGT5   A0A0P4YV14   A0A2P6L8R5   A0A131Z159   A0A224Z308   A0A164YS73   A0A0P6I9F4  

PDB

2DFY     E-value=3.34348e-09,     Score=140

KEGG

101743645    no KO assigned | (RefSeq) LIM domain transcription factor LMO4

GO

GO:0046872   GO:0000981   GO:0005634   GO:0016021   GO:0016740   GO:0008270   GO:0006812   GO:0016887   GO:0000166   GO:0016459   GO:0006810   GO:0006397   GO:0004651  

Length:

98

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01033

Exp number, first 60 AAs:

0.0103

Total prob of N-in:

0.13034

outside

1  -  98

 

 

Pi

249.261864

Theta

192.874956

Tajima's D

0.866821

CLR

0.299054

CSRT

0.625718714064297

Interpretation

Uncertain