SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01807
Pre Gene Modal
BGIBMGA005990
Annotation
cuticular_protein_RR-1_motif_57_precursor_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.124
 

Sequence

CDS
ATGTTCCAATACATTGCGATAGCGTGTTTACTCGGAGTTGCAGCGGCGGCACCATCGGCGACTCCAACAGCAGCAGCTTATGTGGCGGCAGTCGACAGCGTTTCGGTACCGCACTACGGTTTCAACTACGCTGTCAACGACCCCCACACCGGCGACAACAAGGCACAGACAGAGTCTCGCGACGGAGACGTTGTGAAAGGCTCATATTCGCTCACGGAGCCTGACGGCACCATCAGAGTAGTGGACTACACTGCAGACTCCGTTACTGGATTCAACGCTAACGTGAAACGGCTCGGGCCGGCTGCACACCCGCAGACGCTTATAACGAAACAGGCGATCGTCGCGCCGGTTGTAACTCACGCTGTCGCTTCTGTGGCACACGTCCCAACTAGTCTCATATCTGTGGGAATAGGCCACGGACACGGCGGCCACCATTACGCAGGTCTAGGTCATATTGGCCACGGACACGGCGGCCACGATTACGCAGGTCTAGGTCACATTGGCCACTATGGGATAGGCCATGTTGGACACGCAGATCTTGCTCATATCGGTCATGGACATATCGGCCACCTCGGCTTAGGGCATGTAGACCTCGGTTACGCTGGAATCGGTCATCACGCCCACGTAGGTCTCGACCACATTGGCCACATTGGTCTCGGTCATGGAGGTCTCGACCACATTGGCCACATTGGCCTTAGTCATGGAGGTCTCGACCACATTAGCCACATTGGCCTCAGTCATGCAGGTCTTGACCACATCGGTCATGGTCTCAGTTTGAAGCATTAG
Protein
MFQYIAIACLLGVAAAAPSATPTAAAYVAAVDSVSVPHYGFNYAVNDPHTGDNKAQTESRDGDVVKGSYSLTEPDGTIRVVDYTADSVTGFNANVKRLGPAAHPQTLITKQAIVAPVVTHAVASVAHVPTSLISVGIGHGHGGHHYAGLGHIGHGHGGHDYAGLGHIGHYGIGHVGHADLAHIGHGHIGHLGLGHVDLGYAGIGHHAHVGLDHIGHIGLGHGGLDHIGHIGLSHGGLDHISHIGLSHAGLDHIGHGLSLKH

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.989983
 
 
Length:
261
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.72535
Exp number, first 60 AAs:
11.40108
Total prob of N-in:
0.49776
POSSIBLE N-term signal
sequence
outside
1  -  261
 
 

Population Genetic Test Statistics

Pi
158.761636
Theta
181.20598
Tajima's D
-0.291654
CLR
0.688498
CSRT
0.287735613219339
Interpretation
Uncertain
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