SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01806  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA006162
Annotation
PREDICTED:_manganese-transporting_ATPase_13A1_[Plutella_xylostella]
Full name
Cation-transporting ATPase      
Location in the cell
Nuclear   Reliability : 3.738
 

Sequence

CDS
ATGGTAAAGATGCAGTCGTCACTAGATGATTTAGTTCAGTATACACAGCTTTTCAAGCCTGTTCCGACTGTTTTACAAGGCACGGTTTTGCCTTTTCTATTTATTTACCCTCTGGTTTTTTATTCATGGATCGTTGTGTACGGTATAGAAGATAATTTCGAGGCAGGATTCGTGACTGTGGCTGTGATAGCAACAGTCCAGATCCTCATATGTTTGTGTTGTTACTGGAGTGTTCATATCAACTGCTTCCTTTCTTGTTCAGCGGTTAAAGATCCAATACAAGCTGAGGTAGTCAAGGTTGTACCGACTTCTAACAATGGATCATCTGAGCTTGTTCGACTACATCATACGAAGTCAACAAAAAAAGACAGTATACACCCAGATGTTTGGTTCATATTTCAAAAGAGTAAATATGTGTATGACTGGGATAAAAAGAATTTTCACACCATAGAATTTCCTATCAATAAAATTTATGAAGAATATATGGAATCCAAAGGATATTCTGATGATGAGGCTATTGATTTAGCAGAAAAAGAATTTGGTAAAAATGAGATGGTTATGGTTGTTCCGGAATTTATGGAACTTTTTAAAGAGAGAGCAACAGCACCATTTTTTGTATTTCAAGTATTTTGTGTAGCTCTGTGGTGTTTGGATAAGTATTGGTATTACTCAATATTCACACTAGTGATGTTGGTTATGTTTGAATGTACATTGGTGCAGCAACAGCTCAGAAATATGGCTGAGATCAGAAAGATGGGCAATAAGCCTTACAACATTAATGTATATCGAAACAGGAGGTGGAGACAAATAACAAGCGATCAGCTTTTACCGGGTGACATAGTATCCCTCACAAGATCCGTCAACGAAAACCTGGTCCCTTGTGACATAATACTCTTACGGGGGTCCTGTATTGTAGATGAGTCCATGTTGACTGGTGAGAGTGTTCCACAAATGAAAGAAGCTTTGGAAAATGAAAAGGACCTCCAGCAACATCTAGAACCTGAGGGTGATGGTAAACTTCACATGCTTTTTGGTGGTACTAAGATTGTACAACATTCCTCACCATCCAAAAGCTCACCTTCAGGGCTTAAAGCCCCGGATAATGGTTGCATTGGTTATGTTATACGTAATGGTTTTAACACATCACAGGGTAAACTGCTAAGAACCATTTTGTTTGGAGTGAAAAGGGTCACAGCTAATAATCTTGAAACTTTTGGATTCATAATGTTTTTGCTTATATTTGCTGTAGCTGCTGCGGCCTATGTGTGGGTCAAGGGTTGCGAAGATCCTGAGCGAAATAGATACAAATTATTTTTGGAATGTACTTTAATATTGACATCGGTTGTTCCGCCTGAACTGCCCATAGAGTTGTCTCTAGCAGTTAATACGTCATTGTTGTCTTTATCGAAATTGGCCGTATTCTGTACAGAACCATTTAGGATACCCTTTGCTGGTAAAGTAGAAATATGTTGTTTCGATAAGACTGGAACATTGACAAGTGATAATTTAGTTGTTGAAGGAGTAGCTGGAATAGGAGAACACAAAGATGCAACAGTGGTTCCCCTTTCTGAAGCTCCAATGGAGACTGTTCAAGTTTTAGCATCGTGCCACTCTTTAGTTCAACTTGACGATGGAATTGTTGGGGATCCATTAGAAAAAGCTACATTGAAGGCAGCAGAGTGGAACCTCACCAAAAGCGATGCTGTAGTACCAAAGAAGGGGAAGTCACCTGGCCTGAAAATTGTTCATAGAAATCATTTTTCTAGTGCTCTCAAAAGAATGTCCGTGATAGCAGGTTATCAGATCAATGAAAGAGGTTTTATTGAGACTCACTACATCAGTAGTGTTAAGGGTGCCCCAGAAACAATCAAATCGATGCTTAAGGATGTCCCTAGTCATTATGATCATGTTTATCTAACGCTCTCGAGGAGAGGCGCGCGAGTTTTAGCTCTGGGTTATAGAAATTTAGGAAAATTGACATCTCAAGAGATAAGGGATTTATCCCGGGATGACATTGAATGTGACCTAACGTTTGTAGGTTTCGTCATAATATCATGTCCATTAAAAACGGACTCAAAGAAAGCTATAGCTGAAATTGTTCACGCTTCGCATTCAGTCGTGATGATAACGGGTGATAATCCGCTGACGGCGTGTCATGTAGCCAAAGAATTAAAATTCACCCAAAAAGAGGAGGTTTTGATATTGACCGAGAGTGATGGGGAGTGGGCATGGAAATCAATTGATGAAGAACTAAATCTTCCAGTGCAACCGTCTCAGAAAACAAAATCGTTGACCTCGAAATTCGATCTTTGCATAACCGGTGAGGGTCTGACTTTCTTGAATGAAAATCATCGTAAGTTTCTCCTCGAATTGATGCCGCACATCAAGGTTTTTGCCAGATTCGCGCCCAAGCAGAAGGAATTCGTTGTGGTCACGTTAAAGTCTTTGGGATATACCACGCTCATGTGCGGCGATGGAACTAATGATGTCGGAGCGTTAAAACATGCTGATGTCGGAGTGGCTATTTTGGCTAATGCACCAGAACGAATCCGCGAGAAACCTCGAGAGGAACGTCCTCCGGAGCCGGAGCGGGGGCGGCGCCCGAGGGACCCGCGCGCCGACGCACGAGCCGACGCCGCCGCCAGGTTCCGCCGCGCCATGAAGGAACTCGAAGACGACGACCAGCCGCAGGTCGTGAGGCTCGGAGACGCTAGCGTTGCGGCTCCCTTTACCAGCCGACTCTCAAGTATACTTTGCATTTGTCACATCATCAAACAAGGCCGTTGCACGCTGGTGACCACGCTGCAGATGTTCAAGATCCTAGCGCTGAACGCTTTGATATTGGCGTACAGTCAATCCGTGTTATATCTAGACGGAATCAAATTCAGTGACACCCAAGCGACGTTGCAGAGTTTGTTGTTGGCGTCCTGTTTCTTGTTCATTTCGAGGTCTAAGCCGTTGAAGCAGTTATCCAAAGAGCGTCCATTGCCAAATATATTCAATATGTATACAATCATGACGGTGCTCAGTCAGTTCGCGGTCCACTTCCTGTGTCTCATTTATTTGGTGCACGAGGCTACCGTGAGATCTCCGGGCCGGGACAATAAACCGAAATTAGATATGGATTTAGCTGAAGACGAAGATCGAGAATTCGCTCCAGATTTACTGAACAGCACCGTTTATATTATATCAATGGCGTTACAGATTTCCACTTTTGCTATCAACTACAGAGGTGAACCGTTCATGCAAGGTTTGAAGGACAACAAACCATTACTGTACAGCATTGTGATATCCGGAGGGGCGGTGCTTGCTCTCGCAGCCGGGATATTCCCTGACCTCTCCAACATGTTCGAAATAGTATACTTCCCACCGGATTATCGGGTGATACTCGTGCAAGTTTTGATAGCTGATATGTTGTTCGCGTATTTGGTGGACCGTTTCTGTTTGTTCCTCTTCGGGGAAGGGCGGATTCCTAAGACGTAA
Protein
MVKMQSSLDDLVQYTQLFKPVPTVLQGTVLPFLFIYPLVFYSWIVVYGIEDNFEAGFVTVAVIATVQILICLCCYWSVHINCFLSCSAVKDPIQAEVVKVVPTSNNGSSELVRLHHTKSTKKDSIHPDVWFIFQKSKYVYDWDKKNFHTIEFPINKIYEEYMESKGYSDDEAIDLAEKEFGKNEMVMVVPEFMELFKERATAPFFVFQVFCVALWCLDKYWYYSIFTLVMLVMFECTLVQQQLRNMAEIRKMGNKPYNINVYRNRRWRQITSDQLLPGDIVSLTRSVNENLVPCDIILLRGSCIVDESMLTGESVPQMKEALENEKDLQQHLEPEGDGKLHMLFGGTKIVQHSSPSKSSPSGLKAPDNGCIGYVIRNGFNTSQGKLLRTILFGVKRVTANNLETFGFIMFLLIFAVAAAAYVWVKGCEDPERNRYKLFLECTLILTSVVPPELPIELSLAVNTSLLSLSKLAVFCTEPFRIPFAGKVEICCFDKTGTLTSDNLVVEGVAGIGEHKDATVVPLSEAPMETVQVLASCHSLVQLDDGIVGDPLEKATLKAAEWNLTKSDAVVPKKGKSPGLKIVHRNHFSSALKRMSVIAGYQINERGFIETHYISSVKGAPETIKSMLKDVPSHYDHVYLTLSRRGARVLALGYRNLGKLTSQEIRDLSRDDIECDLTFVGFVIISCPLKTDSKKAIAEIVHASHSVVMITGDNPLTACHVAKELKFTQKEEVLILTESDGEWAWKSIDEELNLPVQPSQKTKSLTSKFDLCITGEGLTFLNENHRKFLLELMPHIKVFARFAPKQKEFVVVTLKSLGYTTLMCGDGTNDVGALKHADVGVAILANAPERIREKPREERPPEPERGRRPRDPRADARADAAARFRRAMKELEDDDQPQVVRLGDASVAAPFTSRLSSILCICHIIKQGRCTLVTTLQMFKILALNALILAYSQSVLYLDGIKFSDTQATLQSLLLASCFLFISRSKPLKQLSKERPLPNIFNMYTIMTVLSQFAVHFLCLIYLVHEATVRSPGRDNKPKLDMDLAEDEDREFAPDLLNSTVYIISMALQISTFAINYRGEPFMQGLKDNKPLLYSIVISGGAVLALAAGIFPDLSNMFEIVYFPPDYRVILVQVLIADMLFAYLVDRFCLFLFGEGRIPKT

Summary

Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
Feature
chain  Cation-transporting ATPase
EC Number
3.6.3.-
EMBL
BABH01004811    ODYU01008780    SOQ52680.1    NWSH01002391    PCG68383.1    HQ184468    + More
ADN88179.1    KQ459601    KPI93983.1    AGBW02013052    OWR44040.1    JTDY01000232    KOB78149.1    GEDC01027435    GEDC01012390    JAS09863.1    JAS24908.1    KQ460855    KPJ11901.1    KQ971343    KYB27482.1    GDKW01000507    JAI56088.1    GALX01003399    JAB65067.1    KK852846    KDR15104.1    KZ288391    PBC26350.1    KQ435770    KOX75180.1    ACPB03011142    KQ763867    OAD54693.1    KQ982769    KYQ50837.1    KQ414786    KOC60801.1    GL445914    EFN88845.1    KK107455    EZA50425.1    LBMM01000533    KMQ98115.1    GL435569    EFN73120.1    KQ978023    KYM97902.1    KQ980636    KYN14959.1    GL888182    EGI65695.1    KQ981490    KYN41044.1    KQ976401    KYM92554.1    ADTU01013223    UFQS01000295    UFQT01000295    SSX02575.1    SSX22949.1    CH477233    EAT46757.1    AJWK01007292    GDHC01007247    JAQ11382.1    GBBM01000427    JAC34991.1    CVRI01000055    CRL01594.1    GANO01001647    JAB58224.1    GFDF01009210    JAV04874.1    NNAY01001175    OXU24866.1    AJVK01000157    AJVK01000158    AJVK01000159    JH431939    GFDF01009209    JAV04875.1    GL732623    EFX70258.1    JXUM01043842    KQ561377    KXJ78797.1    GFDF01009326    JAV04758.1    GBHO01025127    GBHO01025126    JAG18477.1    JAG18478.1    KQ434889    KZC10220.1    GBRD01014970    GBRD01011697    GBRD01003243    JAG50856.1    NEDP02076705    OWF35828.1    DS235100    EEB11998.1    GFTR01008454    JAW07972.1    AJWK01026643    GG666616    EEN48463.1    CH933807    EDW11294.1    CH940649    EDW63914.1    CH964274    EDW85282.1    CP012523    ALC39746.1    NHOQ01002357    PWA17617.1    CH954177    KQS70574.1    CH480818    EDW52564.1    CM000361    CM002910    EDX04667.1    KMY89702.1    EDV58922.1    HAED01008057    SBQ94269.1    HAEE01004298    SBR24318.1    HAEH01002819    HAEI01009100    SBS06829.1    HAEF01020830    HAEG01001521    SBR61989.1    HADW01011454    HADX01015471    SBP12854.1    HADZ01012048    HAEA01008323    SBQ36803.1    HADY01003789    HAEJ01006774    SBP42274.1    OUUW01000004    SPP79475.1    CH902620    EDV32061.2    HAEB01001958    HAEC01012373    SBQ80590.1    AE014134    BT053681    AAF53072.1    ACK77596.1    CH379060    EAL33855.1    AERX01007738    CH479180    EDW29119.1    AF145632    AAD38607.1    KQ041602    KKF24394.1    AYCK01014652    CM000157    EDW88048.1    JARO02002360    KPP72851.1   
Pfam
PF00474   SSF        + More
PF00059   Lectin_C
Interpro
IPR023299   ATPase_P-typ_cyto_dom_N        + More
IPR001757   P_typ_ATPase       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR006544   P-type_TPase_V       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       
IPR018303   ATPase_P-typ_P_site       
IPR001734   Na/solute_symporter       
IPR038377   Na/Glc_symporter_sf       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR016187   CTDL_fold       
SUPFAM
SSF81660   SSF81660        + More
SSF81665   SSF81665       
SSF56784   SSF56784       
SSF81653   SSF81653       
SSF56436   SSF56436       
PDB
3WGV     E-value=4.16128e-20,     Score=246

Ontologies

Topology

Subcellular location
Membrane  
Length:
1160
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
185.29739
Exp number, first 60 AAs:
26.78265
Total prob of N-in:
0.49873
POSSIBLE N-term signal
sequence
outside
1  -  26
TMhelix
27  -  49
inside
50  -  55
TMhelix
56  -  78
outside
79  -  219
TMhelix
220  -  239
inside
240  -  404
TMhelix
405  -  424
outside
425  -  1001
TMhelix
1002  -  1024
inside
1025  -  1090
TMhelix
1091  -  1113
outside
1114  -  1127
TMhelix
1128  -  1150
inside
1151  -  1160
 
 

Population Genetic Test Statistics

Pi
182.064312
Theta
165.994095
Tajima's D
0.183068
CLR
0.283247
CSRT
0.427978601069947
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 DSSQACVMALTQTDIMIGMK 100.00 2e-10
26822097 TGTITSDNIVVEGVAGIGEHK 100.00 9e-04
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