Gene

KWMTBOMO01804

Pre Gene Modal

BGIBMGA006161

Annotation

PREDICTED:_Golgi_apparatus_protein_1_[Papilio_machaon]

Location

Bomo_Chr4(+):5191952-5200443      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.495

CDS

ATGTCAACTAAAGTCTTCACGACAGTTTGGGTAATAACGGCATGTTTAGGAGTTTTGAAAAATGTGCATTGCCGAAAATCGGATGATAACTCCTACAAAAACTATTTATTCAGCTGGGACGCTGGTGAATGCGCGCTGTTTCATAAATTATGTTCTCACTTTGACGATCATTTCGCTTTGCTGACATGTTCATTACATTCGTCCTATGATAAGACCCAAATACCACCAAGTTGTCAGCACAAGTTATGGGTTCAGCTGTCATACTTAATCAACAACTCATTCTTGTTTCATACACTAAAAGACCCATGTCAAGAAGATACAGAAATATCGAGTTGTTTTGATCCTAATGTCTTAACTGTAGATTGTATATTAAAAAAAAAGCCTAGTGCGACAGTGAAAGTTTGCTGGAGAATGATAAATAAAATAGAATCTCTATTATTTAATGACTGGCAAATTACTACAAACTTCATTTCTAAATGTTTTGATGATGTAAATACTCATACTTGTGGTAAAATTCCACCTGATCCTAAGAGTCTTTCGCAAACAGAGACATTGAAATGTCTTCAAAACTATGAACAATATGTCACTGCAGATTGTAAAGCAGAGATCACTGTACTATATGAAATGAGATACAGTAATTTACAGTTAGATAAAATTGTATTTGCTGCCTGTAATGTAGAACAAAATAGTTTCTGTCGTGATGAAATACCAGGATCATGGTTAATGTATAAATGTCTCCTGAGACATAAGTATGAAAATGGGGTTCGTAAAAAATGTCAAGATCAGCTCTTCTATGATCAAAAAAATATAGCCATGAATTATAAAATGAGTCGAGGTTTAGTAAAGGCATGCAGAGAAGACATTAGAAAGTTTCATTGTCGAAAAGGCATTGTTGAAGACAAAGATGTGAGATTAGCACAAATTTTACTCTGCTTAGAGAGTAACATACAAAATGATACGAAAAGCATTTCGTCTGAGTGTACAGTGGAAATGATTGATCATAGAAAAATGTTGATGGAAGATTATAGACTGTCACCAGAGTTGATGCAGAATTGTGCCAATGACATTACTATGCTATGTAGAGGAATTGAAGCTGGTGGTAAAACTATTCACTGCTTAATGGACCATGCAAGACCTAGGAGAAGAAAAGACAGAAGAATAAGTTTAGAATGTCAGAAGTCATTGGAAATGTTAGTACAGGAAACAAATCCAGGTGAAGATTGGAGAGTTGATCCTGTTTTAAGGGCAGCCTGTAAACCTGTTGTAGATAAAGCATGTGGAGAAATAGCTGGTGGTAATGGCAGAGTCATGTCATGTCTAATGGAAAAAATTCATACAAAAGCAATGACTGATGAATGTGAGGTGGCATTATTGCAAATACAGTACTTCATATCAAGAGATTTTAAGCTTGATCCTCAGTTATATAAAGCTTGTAAGTATGATGCTGTTACTACTTGCAAGGCTAAGTTACAATGGGCTGATGCTAGTGAACATCATTCTGAAAAAGATCCTTTAATATTTCCATGCTTATATAATTATGCTTACAACTCTGAATTGAGAGGCAGATTGCGACTAGCCTGTGAGGAACAAGTGAAGAGGGTAATGAGGCAGAGAGCATCAAGTGTTGATTTAATGCCACAAATTGAGGACTTTTGCATGGATGACTTAGCCAATTTTTGTCTTGAGAATACTGGAAAAGGGGAAGAAATTTTATGTTTACAAAGTAAAATTAAAGAGCTTTCTCCAAAGTGTAAAGATATTGTGTCTAATTTCACTGAAACTCAAAGTGGACACATAGAACTAAATGCAGTTATCAATACAAACTGTCGAGGTATTACTGAAAAACTATGTGCATCTGAACTACAAAGTAAAAAAGAAGAAGATGATGTTCTCGAGTGCCTAATACTTCATAAAAATCATCCAGATGTAAAAGCTAATGTGAAATGCAGAGCTGCCATTGAACACGAACAATTGATCTCATTAAAGAATTATAGATTCACAACCAAGTTTAAGAATGCTTGTAAATATAATGTTGACAGATTTTGTCCCAAAGCACAAACAAAAAACCAAGTTGTATCATGTTTGAGCGAGATAGTAAGAAATGATACAATTAACAGACGTAAACATACAATAGTCAAGGAGTGTCGTCAACAGCTAAGAAGTCAATTATTCCAACAAAAGGAAAATATAGATTTAGACCCGGATCTGAAGGAAGCTTGTAAAAAAGATCTTGAAATATTATGCCCTTCTATTACACATGGTGAGGCTGCAGCCTTAGAGTGCCTTCAGACTTCCAAAGGAAAATTGAGTCAAAAATGTAGGAAGGTATTGTTTGTAGTGAAGAAACAAGAATTTACAGACAGCGGAATTGATTACCATTTGATAAAAACATGCAATGACATGATAGATAAATTCTGCCACAACACAGAACCCTCAAAGATTTTTGACTGTTTGAAAACACATCATCAGAGCCTTGATTTCGAGAAAAATTGTAAAGTTGTTGTGGTGAACCGAATGATAGAACAGAATACAGATTACAGATTTAACATAAATTTGGTCAATTCATGTAAATCTGATATTAATGCACATTGCAGTGAAATATTAGCTAATGAACCTCAAGATGTAGAACTACAAGGAAAAGTATTGTATTGCCTAAAAGAAAAGTTTAGGGAATCAAAATTAACGACAGATTGTGAAAATGAAGTGGCTAATATTTTGAAGGAGCAGGCATTGAATTATCGTCTTGATCCATTGCTTGAGAAGCTGTGTCAAGCTGAAATTCAAACGATATGTTCAGTGCAAAACGATATCACTATTTCGGATGGACAGGTGGAGGAATGCCTCAAGAATGCCTTATTAAAAGACAAAATCGTATCAGCCGAATGCTCCCGTGAAATAGCTAAGTTGATAGAACAAACCGAAGTCGACATCGAGGCTGATCCGTTGTTAGAAAGAGCCTGTGCTTTCGATCTGTTGAAGTATTGTAAAGATCTAGAACATGGTGCTGGGAGACGTCTGAAATGTTTAAAAATTATATCAAATGATGGAACACGGAAGTTGGAGGCAGCATGTGAAAAGGAACTCACAAGTAGATTAGAAATGTATAGATTTGTAGCAGCTAAATTTGAAACACTGGGAGATGCATAA

Protein

MSTKVFTTVWVITACLGVLKNVHCRKSDDNSYKNYLFSWDAGECALFHKLCSHFDDHFALLTCSLHSSYDKTQIPPSCQHKLWVQLSYLINNSFLFHTLKDPCQEDTEISSCFDPNVLTVDCILKKKPSATVKVCWRMINKIESLLFNDWQITTNFISKCFDDVNTHTCGKIPPDPKSLSQTETLKCLQNYEQYVTADCKAEITVLYEMRYSNLQLDKIVFAACNVEQNSFCRDEIPGSWLMYKCLLRHKYENGVRKKCQDQLFYDQKNIAMNYKMSRGLVKACREDIRKFHCRKGIVEDKDVRLAQILLCLESNIQNDTKSISSECTVEMIDHRKMLMEDYRLSPELMQNCANDITMLCRGIEAGGKTIHCLMDHARPRRRKDRRISLECQKSLEMLVQETNPGEDWRVDPVLRAACKPVVDKACGEIAGGNGRVMSCLMEKIHTKAMTDECEVALLQIQYFISRDFKLDPQLYKACKYDAVTTCKAKLQWADASEHHSEKDPLIFPCLYNYAYNSELRGRLRLACEEQVKRVMRQRASSVDLMPQIEDFCMDDLANFCLENTGKGEEILCLQSKIKELSPKCKDIVSNFTETQSGHIELNAVINTNCRGITEKLCASELQSKKEEDDVLECLILHKNHPDVKANVKCRAAIEHEQLISLKNYRFTTKFKNACKYNVDRFCPKAQTKNQVVSCLSEIVRNDTINRRKHTIVKECRQQLRSQLFQQKENIDLDPDLKEACKKDLEILCPSITHGEAAALECLQTSKGKLSQKCRKVLFVVKKQEFTDSGIDYHLIKTCNDMIDKFCHNTEPSKIFDCLKTHHQSLDFEKNCKVVVVNRMIEQNTDYRFNINLVNSCKSDINAHCSEILANEPQDVELQGKVLYCLKEKFRESKLTTDCENEVANILKEQALNYRLDPLLEKLCQAEIQTICSVQNDITISDGQVEECLKNALLKDKIVSAECSREIAKLIEQTEVDIEADPLLERACAFDLLKYCKDLEHGAGRRLKCLKIISNDGTRKLEAACEKELTSRLEMYRFVAAKFETLGDA

Uniprot

H9J9G8   A0A2A4J8D8   A0A2H1WHZ0   A0A2A4J8I0   A0A2A4J9F1   A0A194R302   + More
A0A194PS82   A0A212F7X7   A0A0L7LRR6   U5EST3   A0A1Q3FDG2   B0X7U9   A0A1Q3FG99   Q174F8   A0A1S4FF42   A0A1Q3FGN0   A0A1Q3FEF1   A0A1Q3FDQ9   A0A182H9E8   A0A2J7RB29   A0A084VS89   A0A067R9F6   A0A336LUL6   A0A182YBC8   A0A182NQJ3   A0A182P9L1   A0A182HKK4   A0A182ILE1   A0A3F2YUZ0   Q7PXB5   A0A182QDE3   A0A182X9M0   A0A182TE04   A0A182UWL7   A0A182JTB0   A0A182VVS2   A0A182MDQ0   W5J316   A0A2M4BB87   A0A2M4BB69   A0A2M4BB62   A0A2M4A886   A0A182RNK8   A0A1L8DVX6   A0A1L8DVH7   A0A1L8DVI9   A0A1L8DVJ1   A0A1L8DVK3   A0A1L8DVJ8   A0A2M4BBR4   A0A2M4BB75   A0A2M4BBA2   A0A1B6EC31   A0A182FSQ4   A0A1L8DVF2   A0A2M3ZDX2   E2AIP6   A0A2M3ZGU5   A0A026WUB3   A0A151XHS3   A0A154PF01   A0A2M4A9G9   A0A151IL20   E9J083   A0A195FHK8   A0A1B0CLR1   A0A158ND65   F4X7A1   E2C6H1   A0A310SRV0   A0A195DJ67   A0A2M3Z3S2   A0A2P8ZID3   A0A1W6EVR7   A0A195B0W4   A0A088AD84   K7IXM7   A0A0J7L8F0   A0A1W4WSH8   A0A232F0E4   A0A0C9QL54   A0A0C9PJY9   A0A1Y1M578   A0A1B6FJY6   A0A1W4X394   A0A1B6HQR9   A0A1B6KZZ0   A0A0A1XH87   A0A1W4UEK4   A0A0M4EJH7   W8BDX5   A0A1J1HZV2   A0A034VNQ1   A0A0A1XPK2   A0A1W4URL8   B4IWW2   A0A0K8UKZ2   W8C184   A0A0M8ZXG4   A0A034VR47  

Pubmed

19121390    26354079    22118469    26227816    17510324    26483478    + More
24438588    24845553    25244985    20966253    12364791    20920257    23761445    20798317    24508170    30249741    21282665    21347285    21719571    29403074    20075255    28648823    28004739    25830018    24495485    25348373    17994087   

EMBL

BABH01004811    NWSH01002391    PCG68387.1    ODYU01008780    SOQ52678.1    PCG68385.1    + More
PCG68386.1    KQ460855    KPJ11899.1    KQ459601    KPI93985.1    AGBW02009822    OWR49845.1    JTDY01000232    KOB78150.1    GANO01002219    JAB57652.1    GFDL01009440    JAV25605.1    DS232464    EDS42168.1    GFDL01008472    JAV26573.1    CH477412    EAT41434.1    GFDL01008338    JAV26707.1    GFDL01009112    JAV25933.1    GFDL01009348    JAV25697.1    JXUM01121069    JXUM01121070    JXUM01121071    JXUM01121072    JXUM01121073    KQ566459    KXJ70119.1    NEVH01006564    PNF38032.1    ATLV01015877    KE525039    KFB40833.1    KK852804    KDR16244.1    UFQT01000117    SSX20369.1    APCN01000836    AAAB01008987    EAA01189.4    AXCN02001519    AXCM01000656    ADMH02002125    ETN58727.1    GGFJ01001131    MBW50272.1    GGFJ01001136    MBW50277.1    GGFJ01001135    MBW50276.1    GGFK01003693    MBW37014.1    GFDF01003639    JAV10445.1    GFDF01003640    JAV10444.1    GFDF01003636    JAV10448.1    GFDF01003637    JAV10447.1    GFDF01003641    JAV10443.1    GFDF01003638    JAV10446.1    GGFJ01001117    MBW50258.1    GGFJ01001121    MBW50262.1    GGFJ01001120    MBW50261.1    GEDC01001851    JAS35447.1    GFDF01003666    JAV10418.1    GGFM01006003    MBW26754.1    GL439852    EFN66701.1    GGFM01006978    MBW27729.1    KK107102    QOIP01000005    EZA59620.1    RLU22520.1    KQ982116    KYQ59952.1    KQ434889    KZC10387.1    GGFK01004098    MBW37419.1    KQ977146    KYN05315.1    GL767333    EFZ13759.1    KQ981560    KYN39873.1    AJWK01017543    ADTU01012434    GL888828    EGI57713.1    GL453156    EFN76453.1    KQ760551    OAD59812.1    KQ980800    KYN12933.1    GGFM01002416    MBW23167.1    PYGN01000048    PSN56256.1    KY563414    ARK19823.1    KQ976690    KYM78101.1    AAZX01000042    LBMM01000218    KMR04347.1    NNAY01001405    OXU24082.1    GBYB01001277    JAG71044.1    GBYB01001278    JAG71045.1    GEZM01040038    JAV80979.1    GECZ01019251    GECZ01018664    JAS50518.1    JAS51105.1    GECU01030674    GECU01000778    JAS77032.1    JAT06929.1    GEBQ01022948    JAT17029.1    GBXI01003990    JAD10302.1    CP012525    ALC45102.1    GAMC01007100    JAB99455.1    CVRI01000023    CRK92078.1    GAKP01014001    JAC44951.1    GBXI01001336    JAD12956.1    CH916366    EDV97363.1    GDHF01025121    JAI27193.1    GAMC01007099    JAB99456.1    KQ435811    KOX72907.1    GAKP01014003    JAC44949.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000002320    UP000008820    UP000069940    UP000249989    UP000235965    UP000030765    UP000027135    UP000076408    UP000075884    UP000075885    UP000075840    UP000075880    UP000075882    UP000007062    UP000075886    UP000076407    UP000075902    UP000075903    UP000075881    UP000075920    UP000075883    UP000000673    UP000075900    UP000069272    UP000000311    UP000053097    UP000279307    UP000075809    UP000076502    UP000078542    UP000078541    UP000092461    UP000005205    UP000007755    UP000008237    UP000078492    UP000245037    UP000078540    UP000005203    UP000002358    UP000036403    UP000192223    UP000215335    UP000192221    UP000092553    UP000183832    UP000001070    UP000053105   

PRIDE

H9J9G8   

Pfam

PF00839   Cys_rich_FGFR        + More
PF03031   NIF

Interpro

IPR039728   GLG1        + More
IPR001893   Cys-rich_GLG1_repeat       
IPR017873   Cys-rich_GLG1_repeat_euk       
IPR004274   FCP1_dom       
IPR040078   RNA_Pol_CTD_Phosphatase       
IPR011948   Dullard_phosphatase       
IPR023214   HAD_sf       
IPR036412   HAD-like_sf       

SUPFAM

SSF56784   SSF56784       

Gene 3D

3.40.50.1000    

ProteinModelPortal

H9J9G8   A0A2A4J8D8   A0A2H1WHZ0   A0A2A4J8I0   A0A2A4J9F1   A0A194R302   + More
A0A194PS82   A0A212F7X7   A0A0L7LRR6   U5EST3   A0A1Q3FDG2   B0X7U9   A0A1Q3FG99   Q174F8   A0A1S4FF42   A0A1Q3FGN0   A0A1Q3FEF1   A0A1Q3FDQ9   A0A182H9E8   A0A2J7RB29   A0A084VS89   A0A067R9F6   A0A336LUL6   A0A182YBC8   A0A182NQJ3   A0A182P9L1   A0A182HKK4   A0A182ILE1   A0A3F2YUZ0   Q7PXB5   A0A182QDE3   A0A182X9M0   A0A182TE04   A0A182UWL7   A0A182JTB0   A0A182VVS2   A0A182MDQ0   W5J316   A0A2M4BB87   A0A2M4BB69   A0A2M4BB62   A0A2M4A886   A0A182RNK8   A0A1L8DVX6   A0A1L8DVH7   A0A1L8DVI9   A0A1L8DVJ1   A0A1L8DVK3   A0A1L8DVJ8   A0A2M4BBR4   A0A2M4BB75   A0A2M4BBA2   A0A1B6EC31   A0A182FSQ4   A0A1L8DVF2   A0A2M3ZDX2   E2AIP6   A0A2M3ZGU5   A0A026WUB3   A0A151XHS3   A0A154PF01   A0A2M4A9G9   A0A151IL20   E9J083   A0A195FHK8   A0A1B0CLR1   A0A158ND65   F4X7A1   E2C6H1   A0A310SRV0   A0A195DJ67   A0A2M3Z3S2   A0A2P8ZID3   A0A1W6EVR7   A0A195B0W4   A0A088AD84   K7IXM7   A0A0J7L8F0   A0A1W4WSH8   A0A232F0E4   A0A0C9QL54   A0A0C9PJY9   A0A1Y1M578   A0A1B6FJY6   A0A1W4X394   A0A1B6HQR9   A0A1B6KZZ0   A0A0A1XH87   A0A1W4UEK4   A0A0M4EJH7   W8BDX5   A0A1J1HZV2   A0A034VNQ1   A0A0A1XPK2   A0A1W4URL8   B4IWW2   A0A0K8UKZ2   W8C184   A0A0M8ZXG4   A0A034VR47  

KEGG

101743271    K06816 golgi apparatus protein 1 | (RefSeq) Golgi apparatus protein 1

GO

GO:0000139   GO:0016021   GO:0017134   GO:0006357   GO:0008420   GO:0016020   GO:0047429   GO:0016459   GO:0005515   GO:0006810   GO:0006397   GO:0004651   GO:0005634  

PANTHER

PTHR11884  

SignalP

Position:   1 - 24,         Likelihood:  0.948576

 

 

Length:

1048

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14017

Exp number, first 60 AAs:

0.13725

Total prob of N-in:

0.00716

outside

1  -  1048

 

 

Pi

217.857442

Theta

182.771093

Tajima's D

0.502189

CLR

0.282958

CSRT

0.516574171291435

Interpretation

Uncertain