Gene

KWMTBOMO01803

Pre Gene Modal

BGIBMGA005992

Annotation

PREDICTED:_transmembrane_protein_18_[Papilio_polytes]

Location

Bomo_Chr4(-):5181327-5188781      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.641

CDS

ATGGAAGAATTCGTTGAAGTTAACCAGATATCTGATTTTGTATCGTACCTAAGAAGTATCGAATGGCGTGACCCCTGGTTAATTGCATTGATATCATTTCACATAATAATTACTGTCACTTGTTTCTCCACCAGGAATTATGGCAATTTTCAAGTTATACTTTTTATCATACTCCTTTTGCTAGTGTATTTTTCGGAGAATATAAATGAGCTTGCTGCAAGAAATTGGGCATTATTTTCAAGACAACAATACTTTGATAGTAAAGGCCTATTTATATCAGTGGTGTTTTCGATTCCTATATTGTTAAACTGCATGATAATGGTGGGATCCTGGTTGTACCAATCTACTCAAATAATGACTAATTTAAAAAAAGCACAGTTAAGGCAGCGCCTCAAGGAGATGAACTCGATAAGAGAACAACAGCAACACGTTAAATCTGATTAA

Protein

MEEFVEVNQISDFVSYLRSIEWRDPWLIALISFHIIITVTCFSTRNYGNFQVILFIILLLLVYFSENINELAARNWALFSRQQYFDSKGLFISVVFSIPILLNCMIMVGSWLYQSTQIMTNLKKAQLRQRLKEMNSIREQQQHVKSD

Uniprot

A0A1E1VY87   A0A212F7Y0   A0A194R284   A0A194PKM3   H9J900   V5GD49   + More
A0A023EGS6   Q1HQG4   A0A182N804   A0A182QW26   A0A1Y1L558   A0A2M4C2J1   A0A182UYD0   A0A182TJR8   A0A182LBD2   Q7PQ38   A0A182HP58   A0A182PHE5   T1E923   A0A182LVI4   A0A182WAB7   A0A182XJA4   A0A182FH93   A0A182K137   A0A182YNR7   D6WLC5   A0A1Q3F6A8   B0W5F7   A0A2M3ZCP7   A0A1L8D9U5   A0A182SK74   A0A084W9J7   A0A182ISP2   A0A2M4AU81   W5J9P1   E2AF13   K7J575   A0A232ERW0   A0A088A1C6   A0A2A3ENS3   V9IK05   E2C7C5   A0A182RTQ1   A0A026WEA8   A0A0T6AVM8   B4KR84   A0A1W4XBD6   B4J8V1   U5EGA6   A0A158N9R5   A0A154PQM8   A0A0N0BFD2   T1H6D5   A0A1B6LJ33   A0A3L8DRF0   B4HPJ0   B4QCW6   A0A0A1WZ89   A0A1A9ZB61   A0A1B0C5U5   A0A1B0GBQ7   B3NS06   A1Z903   B4MRI3   A0A0L7QVN5   A0A1B6EVC5   Q4V5Q0   A0A1B6K5P1   A0A195FU22   A0A1W4UHG3   B4MFH0   C1C540   B4P599   B3MEM5   A0A067R500   A0A0M3QUY0   A0A0L7LS04   Q4V5G3   A0A0K8TN79   E0VR95   A0A336KPA6   R4WCV6   A0A1A9YS55   A0A1A9VPQ0   A0A0A9XFQ8   A0A0K8V488   A0A087T0T2   A0A0P4VQ54   A0A2R7WEM3   A0A034WTQ7   A0A1I8PI29   A0A1I8MLV0   A0A1S4EBV3   A0A3Q0ISJ7   T1JB36   A0A224XZU1   A0A069DP02   A0A1B0DM28   B4GGI1   A0A2P6KAL2  

Pubmed

22118469    26354079    19121390    24945155    17204158    17510324    + More
28004739    20966253    12364791    14747013    17210077    25244985    18362917    19820115    24438588    20920257    23761445    20798317    20075255    28648823    24508170    17994087    21347285    30249741    22936249    25830018    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    24845553    26227816    26369729    20566863    23691247    25401762    26823975    27129103    25348373    25315136    26334808   

EMBL

GDQN01011374    GDQN01006928    JAT79680.1    JAT84126.1    AGBW02009822    OWR49846.1    + More
KQ460855    KPJ11898.1    KQ459601    KPI93986.1    BABH01004810    GALX01000386    JAB68080.1    GAPW01005589    GEHC01001452    JAC08009.1    JAV46193.1    DQ440480    CH477847    ABF18513.1    EAT35676.1    AXCN02000910    GEZM01070907    JAV66227.1    GGFJ01010391    MBW59532.1    AAAB01008900    EAA09360.5    APCN01002921    GAMD01002238    JAA99352.1    AXCM01001928    KQ971343    EFA03470.1    GFDL01011945    JAV23100.1    DS231842    EDS35277.1    GGFM01005518    MBW26269.1    GFDF01010872    JAV03212.1    ATLV01021826    KE525324    KFB46891.1    GGFK01011016    MBW44337.1    ADMH02002078    ETN59464.1    GL438984    EFN67968.1    AAZX01000344    NNAY01002545    OXU21090.1    KZ288215    PBC32779.1    JR051309    AEY61473.1    GL453369    EFN76112.1    KK107293    EZA53364.1    LJIG01022701    KRT79162.1    CH933808    EDW08271.1    CH916367    EDW02391.1    GANO01003524    JAB56347.1    ADTU01001412    KQ435050    KZC14225.1    KQ435803    KOX73154.1    GEBQ01016266    JAT23711.1    QOIP01000005    RLU22773.1    CH480816    EDW47574.1    CM000362    CM002911    EDX06777.1    KMY93206.1    GBXI01010120    JAD04172.1    JXJN01026247    CCAG010005869    CH954179    EDV56308.1    AE013599    KX531367    AAM68685.3    ANY27177.1    CH963850    EDW74722.1    KQ414725    KOC62675.1    GECZ01027844    JAS41925.1    BT022606    AAY55022.1    GECU01000925    JAT06782.1    KQ981264    KYN43958.1    CH940667    EDW57141.1    BT081969    ACO53084.1    CM000158    EDW90761.1    CH902619    EDV35489.1    KK852692    KDR18339.1    CP012524    ALC41449.1    JTDY01000232    KOB78159.1    BT022693    AAY55109.1    GDAI01001771    JAI15832.1    DS235459    EEB15901.1    UFQS01000550    UFQT01000550    SSX04823.1    SSX25186.1    AK417203    BAN20418.1    GBHO01024047    GBRD01013140    GDHC01001510    JAG19557.1    JAG52686.1    JAQ17119.1    GDHF01018919    GDHF01010599    JAI33395.1    JAI41715.1    KK112864    KFM58721.1    GDKW01003287    JAI53308.1    KK854712    PTY18114.1    GAKP01000918    JAC58034.1    JH432008    GFTR01002623    JAW13803.1    GBGD01003314    JAC85575.1    AJVK01036842    CH479183    EDW35601.1    MWRG01017951    PRD23353.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000005204    UP000008820    UP000075884    + More
UP000075886    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840    UP000075885    UP000075883    UP000075920    UP000076407    UP000069272    UP000075881    UP000076408    UP000007266    UP000002320    UP000075901    UP000030765    UP000075880    UP000000673    UP000000311    UP000002358    UP000215335    UP000005203    UP000242457    UP000008237    UP000075900    UP000053097    UP000009192    UP000192223    UP000001070    UP000005205    UP000076502    UP000053105    UP000015102    UP000279307    UP000001292    UP000000304    UP000092445    UP000092460    UP000092444    UP000008711    UP000000803    UP000007798    UP000053825    UP000078541    UP000192221    UP000008792    UP000002282    UP000007801    UP000027135    UP000092553    UP000037510    UP000009046    UP000092443    UP000078200    UP000054359    UP000095300    UP000095301    UP000079169    UP000092462    UP000008744   

PRIDE

H9J900    A1Z903    Q4V5Q0    Q4V5G3   

Pfam

PF14770   TMEM18        + More
PF13855   LRR_8

Interpro

IPR026721   TMEM18        + More
IPR032675   LRR_dom_sf       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A1E1VY87   A0A212F7Y0   A0A194R284   A0A194PKM3   H9J900   V5GD49   + More
A0A023EGS6   Q1HQG4   A0A182N804   A0A182QW26   A0A1Y1L558   A0A2M4C2J1   A0A182UYD0   A0A182TJR8   A0A182LBD2   Q7PQ38   A0A182HP58   A0A182PHE5   T1E923   A0A182LVI4   A0A182WAB7   A0A182XJA4   A0A182FH93   A0A182K137   A0A182YNR7   D6WLC5   A0A1Q3F6A8   B0W5F7   A0A2M3ZCP7   A0A1L8D9U5   A0A182SK74   A0A084W9J7   A0A182ISP2   A0A2M4AU81   W5J9P1   E2AF13   K7J575   A0A232ERW0   A0A088A1C6   A0A2A3ENS3   V9IK05   E2C7C5   A0A182RTQ1   A0A026WEA8   A0A0T6AVM8   B4KR84   A0A1W4XBD6   B4J8V1   U5EGA6   A0A158N9R5   A0A154PQM8   A0A0N0BFD2   T1H6D5   A0A1B6LJ33   A0A3L8DRF0   B4HPJ0   B4QCW6   A0A0A1WZ89   A0A1A9ZB61   A0A1B0C5U5   A0A1B0GBQ7   B3NS06   A1Z903   B4MRI3   A0A0L7QVN5   A0A1B6EVC5   Q4V5Q0   A0A1B6K5P1   A0A195FU22   A0A1W4UHG3   B4MFH0   C1C540   B4P599   B3MEM5   A0A067R500   A0A0M3QUY0   A0A0L7LS04   Q4V5G3   A0A0K8TN79   E0VR95   A0A336KPA6   R4WCV6   A0A1A9YS55   A0A1A9VPQ0   A0A0A9XFQ8   A0A0K8V488   A0A087T0T2   A0A0P4VQ54   A0A2R7WEM3   A0A034WTQ7   A0A1I8PI29   A0A1I8MLV0   A0A1S4EBV3   A0A3Q0ISJ7   T1JB36   A0A224XZU1   A0A069DP02   A0A1B0DM28   B4GGI1   A0A2P6KAL2  

KEGG

101742986    K22145 transmembrane protein 18 | (RefSeq) transmembrane protein 18

GO

GO:0016021  

Length:

147

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

61.30004

Exp number, first 60 AAs:

30.76901

Total prob of N-in:

0.31204

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  46

TMhelix

47  -  64

outside

65  -  90

TMhelix

91  -  113

inside

114  -  147

 

 

Pi

25.25225

Theta

185.710263

Tajima's D

-2.462644

CLR

0.712096

CSRT

0.000649967501624919

Interpretation

Uncertain